FFCP PHASE1:Hg19::chr1:153534037..153534052,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:153534037..153534052,- | |||
|description=CAGE_peak_at_chr1:153534037..153534052,- | |description=CAGE_peak_at_chr1:153534037..153534052,- | ||
|id=chr1:153534037..153534052,- | |id=chr1:153534037..153534052,- | ||
Latest revision as of 21:44, 27 July 2015
| Short description: | p@chr1:153534037..153534052, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:153534037..153534052, - |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr1:153534037..153534052- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endo-epithelial cell | 5.81e-42 | 42 |
| respiratory epithelial cell | 6.08e-36 | 13 |
| endodermal cell | 9.52e-32 | 58 |
| epithelial cell | 4.08e-25 | 253 |
| epithelial cell of tracheobronchial tree | 1.71e-21 | 9 |
| epithelial cell of lower respiratory tract | 1.71e-21 | 9 |
| general ecto-epithelial cell | 4.21e-14 | 14 |
| gingival epithelial cell | 7.21e-14 | 3 |
| bronchial epithelial cell | 3.39e-13 | 3 |
| duct epithelial cell | 5.55e-13 | 3 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| gingival epithelium | 7.21e-14 | 3 |
| respiratory system | 1.17e-13 | 74 |
| lower respiratory tract epithelium | 3.39e-13 | 3 |
| epithelium of bronchus | 3.39e-13 | 3 |
| tracheobronchial tree | 1.66e-12 | 15 |
| lower respiratory tract | 1.66e-12 | 15 |
| skin gland | 5.29e-10 | 2 |
| epidermis gland | 5.29e-10 | 2 |
| gland of integumental system | 5.29e-10 | 2 |
| sebaceous gland | 5.29e-10 | 2 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 6.82e-22 | 14 |
Showing 1 to 1 of 1 entries
