FFCP PHASE1:Hg19::chr12:65514968..65514979,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=11197 | |EntrezGene=entrezgene:11197 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18081 | |HGNC=HGNC:18081 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=136bp_to_uc001ssk.2_5end | |association_with_transcript=136bp_to_uc001ssk.2_5end | ||
|cluster_id=chr12:65514968..65514979,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_6_at_WIF1_5end | |description=CAGE_peak_6_at_WIF1_5end | ||
Revision as of 11:22, 24 July 2015
| Short description: | p6@WIF1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_WIF1_5end |
| Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
| Association with transcript: | 136bp_to_uc001ssk.2_5end |
| EntrezGene: | 11197 |
| HGNC: | 18081 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@WIF1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| peptide hormone secreting cell | 1.61e-14 | 1 |
| enteroendocrine cell | 1.61e-14 | 1 |
| type D enteroendocrine cell | 1.61e-14 | 1 |
| somatostatin secreting cell | 1.61e-14 | 1 |
| pancreatic D cell | 1.61e-14 | 1 |
| progenitor cell of endocrine pancreas | 1.61e-14 | 1 |
| GAG secreting cell | 6.22e-07 | 9 |
| carbohydrate secreting cell | 6.22e-07 | 9 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| pituitary gland | 1.60e-27 | 2 |
| diencephalon | 1.39e-17 | 7 |
| future diencephalon | 1.39e-17 | 7 |
| lower lobe of right lung | 1.41e-14 | 1 |
| right lung lobe | 1.41e-14 | 1 |
| lower lobe of lung | 1.41e-14 | 1 |
| lobe of lung | 1.41e-14 | 1 |
| right lung | 1.41e-14 | 1 |
| paracentral gyrus | 2.11e-14 | 1 |
| nucleus accumbens | 2.75e-14 | 1 |
Showing 1 to 10 of 43 entries
| Ontology term | p-value | n |
|---|---|---|
| chondrosarcoma | 4.73e-15 | 1 |
| extraosseous chondrosarcoma | 4.73e-15 | 1 |
| myxoid chondrosarcoma | 4.73e-15 | 1 |
| extraskeletal myxoid chondrosarcoma | 4.73e-15 | 1 |
| somatostatinoma | 1.61e-14 | 1 |
Showing 1 to 5 of 5 entries
