FFCP PHASE1:Hg19::chr19:18900031..18900054,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18900031..18900054,+ | |||
|coexpression_cluster_id=C240 | |coexpression_cluster_id=C240 | ||
|description=CAGE_peak_at_chr19:18900031..18900054,+ | |description=CAGE_peak_at_chr19:18900031..18900054,+ | ||
Latest revision as of 05:22, 26 July 2015
| Short description: | p@chr19:18900031..18900054, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr19:18900031..18900054, + |
| Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr19:18900031..18900054+ |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| preadipocyte | 7.93e-40 | 12 |
| preadipocyte of the breast | 2.95e-31 | 3 |
| fibrocyte | 9.03e-31 | 3 |
| tendon cell | 9.03e-31 | 3 |
| adipocyte of omentum tissue | 1.22e-30 | 3 |
| omentum preadipocyte | 1.36e-29 | 3 |
| fat cell | 8.74e-24 | 15 |
| adipocyte of breast | 1.53e-21 | 2 |
| GAG secreting cell | 9.05e-18 | 9 |
| carbohydrate secreting cell | 9.05e-18 | 9 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| omentum | 2.09e-58 | 6 |
| peritoneum | 2.09e-58 | 6 |
| abdominal cavity | 2.09e-58 | 6 |
| visceral peritoneum | 2.09e-58 | 6 |
| cavity lining | 1.42e-39 | 12 |
| serous membrane | 1.42e-39 | 12 |
| dense regular connective tissue | 9.03e-31 | 3 |
| tendon | 9.03e-31 | 3 |
| regular connective tissue | 9.03e-31 | 3 |
| breast | 1.64e-25 | 10 |
Showing 1 to 10 of 16 entries
