CL:0002567: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=light melanocyte | |name=light melanocyte | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2011-03-01T05:58:23Z | |obo_creation_date=2011-03-01T05:58:23Z | ||
|part_of= | |part_of= | ||
Latest revision as of 16:44, 12 September 2014
| Name: | light melanocyte |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A melanocyte that appears lighter in color." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-01T05:58:23Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000148(melanocyte) |
|---|
Children
| derives from: | FF:0000090 (human light melanocyte sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11274-116H5 (Melanocyte - light, donor1)
- 11351-117H1 (Melanocyte - light, donor2)
- 11423-118G1 (Melanocyte - light, donor3)
Mouse (Mus musculus)
- 11274-116H5 (Melanocyte - light, donor1)
- 11351-117H1 (Melanocyte - light, donor2)
- 11423-118G1 (Melanocyte - light, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002567 (light melanocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.27e-147 | FFCP PHASE2:Hg19::chr16:1521954..1521959,-#_09ada711669176c4510d98d3fffb9773 | p@chr16:1521954..1521959, - |
| 3.27e-147 | FFCP PHASE1:Hg19::chr16:1521954..1521959,-#_09ada711669176c4510d98d3fffb9773 | p@chr16:1521954..1521959, - |
| 5.41e-147 | FFCP PHASE1:Hg19::chr19:3544594..3544603,-#_5df80bf680dc4f69911e42a5a750cc1a | p@chr19:3544594..3544603, - |
| 5.41e-147 | FFCP PHASE2:Hg19::chr19:3544594..3544603,-#_5df80bf680dc4f69911e42a5a750cc1a | p@chr19:3544594..3544603, - |
| 1.47e-146 | FFCP PHASE1:Hg19::chr22:38368691..38368700,-#_8ddd2878775fb3a4924d09fdaa2efb48 | p@chr22:38368691..38368700, - |
| 1.47e-146 | FFCP PHASE2:Hg19::chr22:38368691..38368700,-#_8ddd2878775fb3a4924d09fdaa2efb48 | p@chr22:38368691..38368700, - |
| 5.2e-118 | FFCP PHASE2:Hg19::chr16:84074735..84074743,+#_e9b740db75e61a5f1b71ff949e41addb | p@chr16:84074735..84074743, + |
| 5.2e-118 | FFCP PHASE2:Hg19::chr8:20111535..20111554,-#_e9b740db75e61a5f1b71ff949e41addb | p@chr8:20111535..20111554, - |
| 5.2e-118 | FFCP PHASE2:Hg19::chr16:68678892..68678897,+#_e9b740db75e61a5f1b71ff949e41addb | p12@CDH3 |
| 5.2e-118 | FFCP PHASE2:Hg19::chr19:3554540..3554542,-#_e9b740db75e61a5f1b71ff949e41addb | p@chr19:3554540..3554542, - |
| 5.2e-118 | FFCP PHASE1:Hg19::chr16:84074735..84074743,+#_e9b740db75e61a5f1b71ff949e41addb | p@chr16:84074735..84074743, + |
| 5.2e-118 | FFCP PHASE1:Hg19::chr16:68678892..68678897,+#_e9b740db75e61a5f1b71ff949e41addb | p12@CDH3 |
| 5.2e-118 | FFCP PHASE1:Hg19::chr8:20111535..20111554,-#_e9b740db75e61a5f1b71ff949e41addb | p@chr8:20111535..20111554, - |
| 5.2e-118 | FFCP PHASE1:Hg19::chr19:3554540..3554542,-#_e9b740db75e61a5f1b71ff949e41addb | p@chr19:3554540..3554542, - |
| 7.78e-118 | FFCP PHASE2:Hg19::chr4:4343850..4343857,+#_80db601ca369087547a2bd546335b1b3 | p@chr4:4343850..4343857, + |
| 7.78e-118 | FFCP PHASE1:Hg19::chr4:4343850..4343857,+#_80db601ca369087547a2bd546335b1b3 | p@chr4:4343850..4343857, + |
| 2.59e-117 | FFCP PHASE2:Hg19::chr8:29605929..29605934,+#_6703e16c9fd037b216b33225492c843a | p4@ENST00000517491 |
| 2.59e-117 | FFCP PHASE1:Hg19::chr8:29605929..29605934,+#_6703e16c9fd037b216b33225492c843a | p4@ENST00000517491 |
| 5.69e-99 | FFCP PHASE2:Hg19::chr19:3557800..3557811,-#_18773b00049986ff6808b98b4b2eed08 | p9@MFSD12 |
| 5.69e-99 | FFCP PHASE1:Hg19::chr19:3557800..3557811,-#_18773b00049986ff6808b98b4b2eed08 | p9@MFSD12 |
| 7.95e-99 | FFCP PHASE2:Hg19::chr17:77925869..77925876,-#_106099a7598dfc4b6a002607a742258c | p@chr17:77925869..77925876, - |
| 7.95e-99 | FFCP PHASE2:Hg19::chr11:2920857..2920864,+#_106099a7598dfc4b6a002607a742258c | p13@SLC22A18 |
| 7.95e-99 | FFCP PHASE1:Hg19::chr17:77925869..77925876,-#_106099a7598dfc4b6a002607a742258c | p@chr17:77925869..77925876, - |
| 7.95e-99 | FFCP PHASE1:Hg19::chr11:2920857..2920864,+#_106099a7598dfc4b6a002607a742258c | p13@SLC22A18 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr15:28360857..28360860,-#_6d843aaecf9e681a0e7a467ad032d72f | p@chr15:28360857..28360860, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:1497446..1497455,-#_6d843aaecf9e681a0e7a467ad032d72f | p4@AK129493 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:68678879..68678886,+#_6d843aaecf9e681a0e7a467ad032d72f | p10@CDH3 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:77923816..77923828,-#_6d843aaecf9e681a0e7a467ad032d72f | p@chr17:77923816..77923828, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:1497446..1497455,-#_6d843aaecf9e681a0e7a467ad032d72f | p4@AK129493 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:68678879..68678886,+#_6d843aaecf9e681a0e7a467ad032d72f | p10@CDH3 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:77923816..77923828,-#_6d843aaecf9e681a0e7a467ad032d72f | p@chr17:77923816..77923828, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr15:28360857..28360860,-#_6d843aaecf9e681a0e7a467ad032d72f | p@chr15:28360857..28360860, - |
| 2.17e-98 | FFCP PHASE2:Hg19::chr1:212594718..212594723,+#_b4504f5e839e3d65f76ad84f1d3f5cdd | p@chr1:212594718..212594723, + |
| 2.17e-98 | FFCP PHASE1:Hg19::chr15:28360793..28360804,-#_b4504f5e839e3d65f76ad84f1d3f5cdd | p@chr15:28360793..28360804, - |
| 2.17e-98 | FFCP PHASE1:Hg19::chr15:42694546..42694554,+#_b4504f5e839e3d65f76ad84f1d3f5cdd | p18@CAPN3 |
| 2.17e-98 | FFCP PHASE1:Hg19::chr1:212594718..212594723,+#_b4504f5e839e3d65f76ad84f1d3f5cdd | p@chr1:212594718..212594723, + |
| 2.17e-98 | FFCP PHASE2:Hg19::chr9:12709019..12709029,+#_b4504f5e839e3d65f76ad84f1d3f5cdd | p@chr9:12709019..12709029, + |
| 2.17e-98 | FFCP PHASE2:Hg19::chr15:28360793..28360804,-#_b4504f5e839e3d65f76ad84f1d3f5cdd | p@chr15:28360793..28360804, - |
| 2.17e-98 | FFCP PHASE2:Hg19::chr15:42694546..42694554,+#_b4504f5e839e3d65f76ad84f1d3f5cdd | p18@CAPN3 |
| 2.17e-98 | FFCP PHASE1:Hg19::chr9:12709019..12709029,+#_b4504f5e839e3d65f76ad84f1d3f5cdd | p@chr9:12709019..12709029, + |
| 3.03e-98 | FFCP PHASE1:Hg19::chr15:42694665..42694671,+#_06ba17450a83cd010da71ac32e008838 | p16@CAPN3 |
| 3.03e-98 | FFCP PHASE2:Hg19::chr15:42694665..42694671,+#_06ba17450a83cd010da71ac32e008838 | p16@CAPN3 |
| 3.03e-98 | FFCP PHASE2:Hg19::chr1:1497566..1497576,-#_06ba17450a83cd010da71ac32e008838 | p3@AK129493 |
| 3.03e-98 | FFCP PHASE1:Hg19::chr1:1497566..1497576,-#_06ba17450a83cd010da71ac32e008838 | p3@AK129493 |
| 5.92e-98 | FFCP PHASE2:Hg19::chr7:46799446..46799457,-#_f36dd585097876a777f389959cb118fd | p1@ENST00000487094 |
| 5.92e-98 | FFCP PHASE1:Hg19::chr7:46799446..46799457,-#_f36dd585097876a777f389959cb118fd | p1@ENST00000487094 |
| 6.24e-88 | FFCP PHASE1:Hg19::chr22:26899907..26899914,-#_5fbf0165acf628aa820d8837cef530fe | p@chr22:26899907..26899914, - |
| 6.24e-88 | FFCP PHASE2:Hg19::chr7:20685431..20685438,+#_5fbf0165acf628aa820d8837cef530fe | p@chr7:20685431..20685438, + |
| 6.24e-88 | FFCP PHASE1:Hg19::chr7:20685431..20685438,+#_5fbf0165acf628aa820d8837cef530fe | p@chr7:20685431..20685438, + |
| 6.24e-88 | FFCP PHASE2:Hg19::chr22:26899907..26899914,-#_5fbf0165acf628aa820d8837cef530fe | p@chr22:26899907..26899914, - |
| 9.74e-88 | FFCP PHASE2:Hg19::chr21:38568227..38568233,+#_50cd44c80a1d050a0599e420fba04a8a | p@chr21:38568227..38568233, + |
| 9.74e-88 | FFCP PHASE2:Hg19::chr10:106240041..106240047,-#_50cd44c80a1d050a0599e420fba04a8a | p1@ENST00000447860 |
| 9.74e-88 | FFCP PHASE2:Hg19::chr5:159904569..159904581,-#_50cd44c80a1d050a0599e420fba04a8a | p@chr5:159904569..159904581, - |
| 9.74e-88 | FFCP PHASE1:Hg19::chr21:38568227..38568233,+#_50cd44c80a1d050a0599e420fba04a8a | p@chr21:38568227..38568233, + |
| 9.74e-88 | FFCP PHASE2:Hg19::chr1:207083343..207083348,-#_50cd44c80a1d050a0599e420fba04a8a | p19@FAIM3 |
| 9.74e-88 | FFCP PHASE1:Hg19::chr10:106240041..106240047,-#_50cd44c80a1d050a0599e420fba04a8a | p1@ENST00000447860 |
| 9.74e-88 | FFCP PHASE1:Hg19::chr5:159904569..159904581,-#_50cd44c80a1d050a0599e420fba04a8a | p@chr5:159904569..159904581, - |
| 9.74e-88 | FFCP PHASE1:Hg19::chr1:207083343..207083348,-#_50cd44c80a1d050a0599e420fba04a8a | p19@FAIM3 |
| 1.52e-87 | FFCP PHASE2:Hg19::chr10:93335091..93335099,-#_988c400561700b08b529e4a549c15f24 | p6@BC044257 |
| 1.52e-87 | FFCP PHASE2:Hg19::chr16:68678900..68678907,+#_988c400561700b08b529e4a549c15f24 | p11@CDH3 |
| 1.52e-87 | FFCP PHASE1:Hg19::chr16:68678900..68678907,+#_988c400561700b08b529e4a549c15f24 | p11@CDH3 |
| 1.52e-87 | FFCP PHASE1:Hg19::chr10:93335091..93335099,-#_988c400561700b08b529e4a549c15f24 | p6@BC044257 |
| 2.28e-85 | FFCP PHASE1:Hg19::chr19:3547999..3548008,-#_24050f87fba5b1203897f9719fdbe7ab | p@chr19:3547999..3548008, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr5:159896855..159896863,+#_24050f87fba5b1203897f9719fdbe7ab | p@chr5:159896855..159896863, + |
| 2.28e-85 | FFCP PHASE2:Hg19::chr19:3557867..3557877,-#_24050f87fba5b1203897f9719fdbe7ab | p7@MFSD12 |
| 2.28e-85 | FFCP PHASE1:Hg19::chr5:159896855..159896863,+#_24050f87fba5b1203897f9719fdbe7ab | p@chr5:159896855..159896863, + |
| 2.28e-85 | FFCP PHASE2:Hg19::chr8:41467069..41467095,+#_24050f87fba5b1203897f9719fdbe7ab | p@chr8:41467069..41467095, + |
| 2.28e-85 | FFCP PHASE1:Hg19::chr19:3557867..3557877,-#_24050f87fba5b1203897f9719fdbe7ab | p7@MFSD12 |
| 2.28e-85 | FFCP PHASE2:Hg19::chr19:3547999..3548008,-#_24050f87fba5b1203897f9719fdbe7ab | p@chr19:3547999..3548008, - |
| 2.28e-85 | FFCP PHASE1:Hg19::chr8:41467069..41467095,+#_24050f87fba5b1203897f9719fdbe7ab | p@chr8:41467069..41467095, + |
| 3.04e-85 | FFCP PHASE2:Hg19::chr19:3572689..3572697,+#_d9c89051fd8c878c7cc0fefaf0c378f7 | p22@HMG20B |
| 3.04e-85 | FFCP PHASE1:Hg19::chr19:3572689..3572697,+#_d9c89051fd8c878c7cc0fefaf0c378f7 | p22@HMG20B |
| 4.06e-85 | FFCP PHASE2:Hg19::chr16:89986251..89986268,+#_d2ee3106ebd31fb6075f6069ee22c8ae | p@chr16:89986251..89986268, + |
| 4.06e-85 | FFCP PHASE1:Hg19::chr16:89986251..89986268,+#_d2ee3106ebd31fb6075f6069ee22c8ae | p@chr16:89986251..89986268, + |
| 4.06e-85 | FFCP PHASE2:Hg19::chr13:49155067..49155077,-#_d2ee3106ebd31fb6075f6069ee22c8ae | p@chr13:49155067..49155077, - |
| 4.06e-85 | FFCP PHASE1:Hg19::chr13:49155067..49155077,-#_d2ee3106ebd31fb6075f6069ee22c8ae | p@chr13:49155067..49155077, - |
| 5.41e-85 | FFCP PHASE2:Hg19::chr19:3546150..3546160,-#_ff956ca9a078a19958bc908159bedc3e | p@chr19:3546150..3546160, - |
| 5.41e-85 | FFCP PHASE2:Hg19::chr17:77925835..77925864,+#_ff956ca9a078a19958bc908159bedc3e | p@chr17:77925835..77925864, + |
| 5.41e-85 | FFCP PHASE1:Hg19::chr19:3546150..3546160,-#_ff956ca9a078a19958bc908159bedc3e | p@chr19:3546150..3546160, - |
| 5.41e-85 | FFCP PHASE1:Hg19::chr17:77925835..77925864,+#_ff956ca9a078a19958bc908159bedc3e | p@chr17:77925835..77925864, + |
| 7.21e-85 | FFCP PHASE1:Hg19::chr1:154401791..154401807,+#_f98c99efaef423847ef4905cbc9dae53 | p11@IL6R |
| 7.21e-85 | FFCP PHASE2:Hg19::chr8:29605633..29605652,-#_f98c99efaef423847ef4905cbc9dae53 | p2@C8orf75 |
| 7.21e-85 | FFCP PHASE1:Hg19::chr8:29605633..29605652,-#_f98c99efaef423847ef4905cbc9dae53 | p2@C8orf75 |
| 7.21e-85 | FFCP PHASE2:Hg19::chr1:154401791..154401807,+#_f98c99efaef423847ef4905cbc9dae53 | p11@IL6R |
| 1.28e-84 | FFCP PHASE2:Hg19::chr15:42694558..42694570,+#_e7ca4ade67ac7df31e9eefea9e580d22 | p10@CAPN3 |
| 1.28e-84 | FFCP PHASE1:Hg19::chr15:42694558..42694570,+#_e7ca4ade67ac7df31e9eefea9e580d22 | p10@CAPN3 |
| 1.28e-84 | FFCP PHASE2:Hg19::chr1:2491291..2491303,+#_e7ca4ade67ac7df31e9eefea9e580d22 | p18@TNFRSF14 |
| 1.28e-84 | FFCP PHASE1:Hg19::chr1:2491291..2491303,+#_e7ca4ade67ac7df31e9eefea9e580d22 | p18@TNFRSF14 |
| 1.71e-84 | FFCP PHASE2:Hg19::chr20:61299155..61299169,+#_582be8e1242dbe0cfb8572752c9d9771 | p10@SLCO4A1 |
| 1.71e-84 | FFCP PHASE1:Hg19::chr20:61299155..61299169,+#_582be8e1242dbe0cfb8572752c9d9771 | p10@SLCO4A1 |
| 1.71e-84 | FFCP PHASE2:Hg19::chr1:1497497..1497523,-#_582be8e1242dbe0cfb8572752c9d9771 | p1@AK129493 |
| 1.71e-84 | FFCP PHASE2:Hg19::chr20:55091858..55091864,+#_582be8e1242dbe0cfb8572752c9d9771 | p5@FAM209A |
| 1.71e-84 | FFCP PHASE1:Hg19::chr1:1497497..1497523,-#_582be8e1242dbe0cfb8572752c9d9771 | p1@AK129493 |
| 1.71e-84 | FFCP PHASE1:Hg19::chr20:55091858..55091864,+#_582be8e1242dbe0cfb8572752c9d9771 | p5@FAM209A |
| 1.71e-84 | FFCP PHASE1:Hg19::chr12:102091093..102091104,+#_582be8e1242dbe0cfb8572752c9d9771 | p13@CHPT1 |
| 1.71e-84 | FFCP PHASE2:Hg19::chr12:102091093..102091104,+#_582be8e1242dbe0cfb8572752c9d9771 | p13@CHPT1 |
| 2.27e-84 | FFCP PHASE1:Hg19::chr6:4610902..4610913,+#_59641487cd6921f1315193293629fba7 | p1@ENST00000380106 |
| 2.27e-84 | FFCP PHASE2:Hg19::chr9:12708978..12708990,+#_59641487cd6921f1315193293629fba7 | p@chr9:12708978..12708990, + |
| 2.27e-84 | FFCP PHASE1:Hg19::chr9:12708978..12708990,+#_59641487cd6921f1315193293629fba7 | p@chr9:12708978..12708990, + |
| 2.27e-84 | FFCP PHASE2:Hg19::chr8:29605860..29605870,+#_59641487cd6921f1315193293629fba7 | p3@ENST00000517491 |
