UBERON:0001637: Difference between revisions
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|located_in= | |located_in= | ||
|name=artery | |name=artery | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0004572 | |part_of=UBERON:0004572 | ||
Latest revision as of 17:19, 12 September 2014
| Name: | artery | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An epithelial tube or tree of tibes that transports blood away from the heart[modified from AEO definition]." [AEO:JB] | ||
| Xrefs: |
| ||
| Synonyms: |
"arterial subtree" EXACT [] "arterial system" RELATED [] "arterial tree organ part" EXACT [] "arterial vessel" RELATED [] | ||
| Comments: | Editor notes: Note that in FMA an artery is a tree, whereas AEO/JB defines it as a tube; FMA includes a separate class for what it calls the trunk. Classification in this ontology may currently (Jan 2012) represent a mix of both schemes, although we are gradually revising in the direction of the AEO scheme. | ||
| Alt_id: | UBERON:FMA_50720-MA_0000061-MA_0000064-MIAA_0000034-XAO_0000114-ZFA_0000005 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003509(arterial blood vessel) |
|---|---|
| part_of: | UBERON:0004572(arterial system) |
Children
| is a: | UBERON:0001310 (umbilical artery),UBERON:0002012 (pulmonary artery),UBERON:0002061 (truncus arteriosus),UBERON:0002457 (intersomitic artery),UBERON:0003469 (respiratory system artery),UBERON:0004573 (systemic artery),UBERON:0005432 (aortic sac) |
|---|---|
| derives from: | FF:0010190 (human artery - adult sample) |
| part of: | UBERON:0000415 (artery wall),UBERON:0001917 (endothelium of artery),UBERON:0002111 (artery smooth muscle tissue),UBERON:0007240 (tunica adventitia of artery),CL:1000413 (endothelial cell of artery) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10052-101G7 (aorta, adult, pool1)
- 10190-103E1 (artery, adult)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
... further results Mouse (Mus musculus)
- 10052-101G7 (aorta, adult, pool1)
- 10190-103E1 (artery, adult)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001637 (artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.46e-86 | FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_360027999a78600878e42b010d76b1d2 | p6@Npy1r |
| 1.46e-86 | FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_360027999a78600878e42b010d76b1d2 | p6@Npy1r |
| 6.62e-84 | FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_010f2b6b2b7e5e241585da671a1ee040 | p2@SOX17 |
| 6.62e-84 | FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_010f2b6b2b7e5e241585da671a1ee040 | p2@SOX17 |
| 5.83e-77 | FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_f9c371c9fafc17e47ab6582db70ac3d5 | p1@ENST00000439823 |
| 5.83e-77 | FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_f9c371c9fafc17e47ab6582db70ac3d5 | p1@ENST00000439823 |
| 6.68e-73 | FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_818c26e30a072c3324d1ecde6c339965 | p4@MMP1 |
| 6.68e-73 | FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_818c26e30a072c3324d1ecde6c339965 | p4@MMP1 |
| 9.34e-73 | FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_5c4cccf8b4357b37ae4f2600b3e2220c | p@chr4:7846444..7846449, - |
| 9.34e-73 | FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_5c4cccf8b4357b37ae4f2600b3e2220c | p@chr4:7846444..7846449, - |
| 1.67e-71 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_96ea9bcad16457620b85169430f67c56 | p@chr6:53359400..53359406, + |
| 1.67e-71 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_96ea9bcad16457620b85169430f67c56 | p@chr6:53359400..53359406, + |
| 8.51e-71 | FFCP PHASE1:Hg19::chr4:70653649..70653665,-#_1a086dcb0ed93830ae048c9aed4f7b4c | p4@SULT1B1 |
| 8.51e-71 | FFCP PHASE2:Hg19::chr4:70653649..70653665,-#_1a086dcb0ed93830ae048c9aed4f7b4c | p4@SULT1B1 |
| 1.15e-70 | FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_aaed694fdad84b5dcb20a46e8ccb9782 | p@chr22:21138313..21138336, + |
| 1.15e-70 | FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_aaed694fdad84b5dcb20a46e8ccb9782 | p@chr22:21138313..21138336, + |
| 1.58e-70 | FFCP PHASE1:Hg19::chr4:70653673..70653688,-#_6497710bed5a04a2896e9fedb4163ccd | p3@SULT1B1 |
| 1.58e-70 | FFCP PHASE2:Hg19::chr4:70653673..70653688,-#_6497710bed5a04a2896e9fedb4163ccd | p3@SULT1B1 |
| 2.66e-70 | FFCP PHASE1:Hg19::chr11:102667477..102667490,-#_389c86ad249a2ff3914d9b10939be29b | p@chr11:102667477..102667490, - |
| 2.66e-70 | FFCP PHASE2:Hg19::chr11:102667477..102667490,-#_389c86ad249a2ff3914d9b10939be29b | p@chr11:102667477..102667490, - |
| 7.36e-70 | FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_6cdc0ef8f98ef329ae6e5063328db685 | p5@Npy1r |
| 7.36e-70 | FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_6cdc0ef8f98ef329ae6e5063328db685 | p5@Npy1r |
| 9.2e-70 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_c9b9f52b2f9980f6e2fe78d4b3759697 | p@chr11:102661517..102661541, - |
| 9.2e-70 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_c9b9f52b2f9980f6e2fe78d4b3759697 | p@chr11:102661517..102661541, - |
| 2.47e-69 | FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_404bf0f14a825cc649b0d9da5bdbf2a9 | p@chr2:65009852..65009866, - |
| 2.47e-69 | FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_404bf0f14a825cc649b0d9da5bdbf2a9 | p@chr2:65009852..65009866, - |
| 3.23e-69 | FFCP PHASE2:Hg19::chr4:54931911..54931926,-#_a8ffcacecef160219d7db58b740819dc | p@chr4:54931911..54931926, - |
| 3.23e-69 | FFCP PHASE1:Hg19::chr4:54931911..54931926,-#_a8ffcacecef160219d7db58b740819dc | p@chr4:54931911..54931926, - |
| 9.21e-69 | FFCP PHASE2:Hg19::chr14:23236579..23236596,+#_9717c85525602b0304e2cc69db96a986 | p5@OXA1L |
| 9.21e-69 | FFCP PHASE1:Hg19::chr14:23236579..23236596,+#_9717c85525602b0304e2cc69db96a986 | p5@OXA1L |
| 1.74e-68 | FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_20af31b9f368bd2a82d02586be558c54 | p@chr3:30334038..30334060, + |
| 1.74e-68 | FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_20af31b9f368bd2a82d02586be558c54 | p@chr3:30334038..30334060, + |
| 3.58e-68 | FFCP PHASE2:Hg19::chr3:149258838..149258848,-#_c0988d707da50d7678a9280ddd72ab1c | p24@WWTR1 |
| 3.58e-68 | FFCP PHASE1:Hg19::chr3:149258838..149258848,-#_c0988d707da50d7678a9280ddd72ab1c | p24@WWTR1 |
| 1.03e-67 | FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_2365adaa92ceef9d50533a7f243ed941 | p@chr22:21138343..21138378, + |
| 1.03e-67 | FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_2365adaa92ceef9d50533a7f243ed941 | p@chr22:21138343..21138378, + |
| 2.74e-67 | FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_b6d25e521466e0b7a30a45ebc46c349b | p3@MMP1 |
| 2.74e-67 | FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_b6d25e521466e0b7a30a45ebc46c349b | p3@MMP1 |
| 1.26e-66 | FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_e1ef3c46dee6ee741eabe58ee1af5ea3 | p@chr11:102668178..102668206, + |
| 1.26e-66 | FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_e1ef3c46dee6ee741eabe58ee1af5ea3 | p@chr11:102668178..102668206, + |
| 4.64e-66 | FFCP PHASE1:Hg19::chr11:102668016..102668028,-#_b2b05d291848ca88b91b9e109f3e5550 | p5@MMP1 |
| 4.64e-66 | FFCP PHASE2:Hg19::chr11:102668016..102668028,-#_b2b05d291848ca88b91b9e109f3e5550 | p5@MMP1 |
| 2.83e-65 | FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_c3702c882b15f4c294d26d6e7fc6a074 | p@chrX:160839744..160839754, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_c3702c882b15f4c294d26d6e7fc6a074 | p@chrX:160839744..160839754, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr2:112043522..112043530, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr2:178190171..178190178, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr17:87574327..87574332, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr17:14827154..14827169, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr17:14827154..14827169, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr17:14802633..14802637, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr17:14802633..14802637, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_c3702c882b15f4c294d26d6e7fc6a074 | p5@Adamts2 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_c3702c882b15f4c294d26d6e7fc6a074 | p5@Adamts2 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr8:69228447..69228492, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr8:69228447..69228492, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr2:178190171..178190178, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr17:87574327..87574332, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_c3702c882b15f4c294d26d6e7fc6a074 | p@chr2:112043522..112043530, - |
| 1.11e-64 | FFCP PHASE1:Hg19::chr11:102668708..102668742,+#_01ef1d55436198753212b4161e3b579d | p@chr11:102668708..102668742, + |
| 1.11e-64 | FFCP PHASE2:Hg19::chr11:102668708..102668742,+#_01ef1d55436198753212b4161e3b579d | p@chr11:102668708..102668742, + |
| 9.18e-63 | FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_48e7d93cc02ebb7960a3eae6e19fa0df | p@chr11:102662162..102662217, - |
| 9.18e-63 | FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_48e7d93cc02ebb7960a3eae6e19fa0df | p@chr11:102662162..102662217, - |
| 1.65e-60 | FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_fd5eb17ac0d2114a13ca192873e2688e | p@chr12:96830430..96830450, + |
| 1.65e-60 | FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_fd5eb17ac0d2114a13ca192873e2688e | p@chr12:96830430..96830450, + |
| 6.48e-58 | FFCP PHASE2:Hg19::chr10:4823096..4823144,-#_f5666b5fdd8c3aab2c5fa4cb6dcd079c | p@chr10:4823096..4823144, - |
| 6.48e-58 | FFCP PHASE1:Hg19::chr10:4823096..4823144,-#_f5666b5fdd8c3aab2c5fa4cb6dcd079c | p@chr10:4823096..4823144, - |
| 3.35e-57 | FFCP PHASE1:Hg19::chr11:102661061..102661115,-#_1197d75925a1c2cd7cb7f7ea8d27251a | p@chr11:102661061..102661115, - |
| 3.35e-57 | FFCP PHASE2:Hg19::chr11:102661061..102661115,-#_1197d75925a1c2cd7cb7f7ea8d27251a | p@chr11:102661061..102661115, - |
| 1.03e-56 | FFCP PHASE2:Hg19::chr3:106484411..106484418,+#_c17dace4250fa2fd706be8335ad8b56d | p@chr3:106484411..106484418, + |
| 1.03e-56 | FFCP PHASE1:Hg19::chr3:106484411..106484418,+#_c17dace4250fa2fd706be8335ad8b56d | p@chr3:106484411..106484418, + |
| 6.26e-56 | FFCP PHASE1:Hg19::chr5:54281535..54281547,-#_eb98bfec5c881754743acc60fe60563b | p2@ESM1 |
| 6.26e-56 | FFCP PHASE2:Hg19::chr5:54281535..54281547,-#_eb98bfec5c881754743acc60fe60563b | p2@ESM1 |
| 1.54e-55 | FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_9cf96854a4b07c04d87cfff6e56aa1fc | p@chr2:134548872..134548879, - |
| 1.54e-55 | FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_9cf96854a4b07c04d87cfff6e56aa1fc | p@chr2:134548872..134548879, - |
| 3.85e-55 | FFCP PHASE2:Hg19::chr4:145567563..145567572,+#_af686683b3ebae5d67243758ddd2a90b | p8@HHIP |
| 3.85e-55 | FFCP PHASE1:Hg19::chr4:145567563..145567572,+#_af686683b3ebae5d67243758ddd2a90b | p8@HHIP |
| 4.21e-55 | FFCP PHASE2:Hg19::chr11:102663449..102663467,-#_7ddf9165f58b1cfca8ac873f62ce2354 | p@chr11:102663449..102663467, - |
| 4.21e-55 | FFCP PHASE1:Hg19::chr11:102663449..102663467,-#_7ddf9165f58b1cfca8ac873f62ce2354 | p@chr11:102663449..102663467, - |
| 7.65e-55 | FFCP PHASE2:Hg19::chr11:102667434..102667447,-#_3baa9c952b6d907c3793149f7c33bad1 | p@chr11:102667434..102667447, - |
| 7.65e-55 | FFCP PHASE1:Hg19::chr11:102667434..102667447,-#_3baa9c952b6d907c3793149f7c33bad1 | p@chr11:102667434..102667447, - |
| 2.37e-54 | FFCP PHASE2:Hg19::chr15:39544232..39544238,+#_a941e39547f75441c2a90f1ba9844257 | p@chr15:39544232..39544238, + |
| 2.37e-54 | FFCP PHASE1:Hg19::chr15:39544232..39544238,+#_a941e39547f75441c2a90f1ba9844257 | p@chr15:39544232..39544238, + |
| 7.57e-54 | FFCP PHASE1:Hg19::chr11:102667504..102667527,-#_097be48600a40107d3b3ac3eb5b0a224 | p@chr11:102667504..102667527, - |
| 7.57e-54 | FFCP PHASE2:Hg19::chr11:102667504..102667527,-#_097be48600a40107d3b3ac3eb5b0a224 | p@chr11:102667504..102667527, - |
| 1.03e-53 | FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_ad2e13777532f5da126ed150cd3bbcf0 | p@chr4:74703497..74703511, + |
| 1.03e-53 | FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_ad2e13777532f5da126ed150cd3bbcf0 | p@chr4:74703497..74703511, + |
| 1.19e-53 | FFCP PHASE1:Hg19::chr4:54931877..54931892,-#_450f303ddc89ca4a12c0c82cf0481a72 | p@chr4:54931877..54931892, - |
| 1.19e-53 | FFCP PHASE2:Hg19::chr4:54931877..54931892,-#_450f303ddc89ca4a12c0c82cf0481a72 | p@chr4:54931877..54931892, - |
| 2.25e-53 | FFCP PHASE1:Hg19::chr1:186946626..186946652,+#_d83c996e3e75f8d561a1517004448398 | p@chr1:186946626..186946652, + |
| 2.25e-53 | FFCP PHASE2:Hg19::chr1:186946626..186946652,+#_d83c996e3e75f8d561a1517004448398 | p@chr1:186946626..186946652, + |
| 4.23e-52 | FFCP PHASE1:Hg19::chr4:145567538..145567544,+#_65ac8d6eb6b962a9ac743a9e1bd2c4cb | p13@HHIP |
| 4.23e-52 | FFCP PHASE2:Hg19::chr4:145567538..145567544,+#_65ac8d6eb6b962a9ac743a9e1bd2c4cb | p13@HHIP |
| 6.05e-52 | FFCP PHASE1:Hg19::chr11:12182490..12182503,+#_b9debf258924771c526c9671a1b02156 | p8@MICAL2 |
| 6.05e-52 | FFCP PHASE2:Hg19::chr11:12182490..12182503,+#_b9debf258924771c526c9671a1b02156 | p8@MICAL2 |
| 5.22e-51 | FFCP PHASE1:Hg19::chr8:90556171..90556173,+#_07d50f10cb0de67c007ab1916ce59565 | p@chr8:90556171..90556173, + |
| 5.22e-51 | FFCP PHASE2:Hg19::chr8:90556171..90556173,+#_07d50f10cb0de67c007ab1916ce59565 | p@chr8:90556171..90556173, + |
| 9.34e-51 | FFCP PHASE2:Mm9::chr17:75578018..75578028,+#_e462a5a3c78f946a58e6957fe967f383 | p14@Ltbp1 |
| 9.34e-51 | FFCP PHASE1:Mm9::chr17:75578018..75578028,+#_e462a5a3c78f946a58e6957fe967f383 | p14@Ltbp1 |
| 1.21e-50 | FFCP PHASE2:Hg19::chr2:228735763..228735772,+#_bd6fd63d1edc938188ea3c63f81128e6 | p2@WDR69 |
| 1.21e-50 | FFCP PHASE1:Hg19::chr2:228735763..228735772,+#_bd6fd63d1edc938188ea3c63f81128e6 | p2@WDR69 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Part of the circulatory system composed of blood vessels which carry oxygenated blood away from the heart to the rest of the body.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
