UBERON:0003703: Difference between revisions
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|located_in= | |located_in= | ||
|name=extrahepatic bile duct | |name=extrahepatic bile duct | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 17:41, 12 September 2014
| Name: | extrahepatic bile duct | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "the passages external to the liver for the conveyance of bile." [MP:0009498] | ||
| Xrefs: |
| ||
| Synonyms: |
"bile duct extrahepatic part" RELATED [MA:0002659] "extrahepatic biliary system" RELATED [GAID:281] | ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002394(bile duct) |
|---|
Children
| is a: | UBERON:0001174 (common bile duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003703 (extrahepatic bile duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr19:49545691..49545692,+#_a098cdc2924682874b59bfe8e62ded0e | p@chr19:49545691..49545692, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr19:49545691..49545692,+#_a098cdc2924682874b59bfe8e62ded0e | p@chr19:49545691..49545692, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:20093569..20093572,+#_a098cdc2924682874b59bfe8e62ded0e | p@chr15:20093569..20093572, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:98807901..98807908,-#_a098cdc2924682874b59bfe8e62ded0e | p@chr7:98807901..98807908, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:20093569..20093572,+#_a098cdc2924682874b59bfe8e62ded0e | p@chr15:20093569..20093572, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr7:98807901..98807908,-#_a098cdc2924682874b59bfe8e62ded0e | p@chr7:98807901..98807908, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:98796685..98796688,-#_a098cdc2924682874b59bfe8e62ded0e | p@chr7:98796685..98796688, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr7:98796685..98796688,-#_a098cdc2924682874b59bfe8e62ded0e | p@chr7:98796685..98796688, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr19:15923954..15923958,-#_a098cdc2924682874b59bfe8e62ded0e | p@chr19:15923954..15923958, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:99779265..99779276,+#_a098cdc2924682874b59bfe8e62ded0e | p15@STAG3 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr19:15923954..15923958,-#_a098cdc2924682874b59bfe8e62ded0e | p@chr19:15923954..15923958, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr7:99779265..99779276,+#_a098cdc2924682874b59bfe8e62ded0e | p15@STAG3 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_c0aceda25608ad2f38c0fe4de50a7588 | p@chr3:139035972..139036016, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr19:49545646..49545652,+#_c0aceda25608ad2f38c0fe4de50a7588 | p@chr19:49545646..49545652, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_c0aceda25608ad2f38c0fe4de50a7588 | p@chr3:139035972..139036016, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr19:49545646..49545652,+#_c0aceda25608ad2f38c0fe4de50a7588 | p@chr19:49545646..49545652, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr7:98595103..98595105,-#_c0aceda25608ad2f38c0fe4de50a7588 | p@chr7:98595103..98595105, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr7:98595103..98595105,-#_c0aceda25608ad2f38c0fe4de50a7588 | p@chr7:98595103..98595105, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr11:69867159..69867175,-#_7ef2d81038af2048d85b5f1ce872e9f8 | p3@ENST00000528507 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:98870790..98870795,+#_7ef2d81038af2048d85b5f1ce872e9f8 | p7@MYH16 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr22:30653778..30653783,-#_7ef2d81038af2048d85b5f1ce872e9f8 | p@chr22:30653778..30653783, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:150037547..150037552,-#_7ef2d81038af2048d85b5f1ce872e9f8 | p10@RARRES2 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:150037547..150037552,-#_7ef2d81038af2048d85b5f1ce872e9f8 | p10@RARRES2 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr20:61339609..61339610,+#_7ef2d81038af2048d85b5f1ce872e9f8 | p@chr20:61339609..61339610, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr13:23368290..23368299,+#_7ef2d81038af2048d85b5f1ce872e9f8 | p@chr13:23368290..23368299, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr22:30653778..30653783,-#_7ef2d81038af2048d85b5f1ce872e9f8 | p@chr22:30653778..30653783, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:98870980..98870981,+#_7ef2d81038af2048d85b5f1ce872e9f8 | p8@MYH16 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr20:61339609..61339610,+#_7ef2d81038af2048d85b5f1ce872e9f8 | p@chr20:61339609..61339610, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:98870980..98870981,+#_7ef2d81038af2048d85b5f1ce872e9f8 | p8@MYH16 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:40184895..40184905,-#_7ef2d81038af2048d85b5f1ce872e9f8 | p@chr2:40184895..40184905, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr13:23368290..23368299,+#_7ef2d81038af2048d85b5f1ce872e9f8 | p@chr13:23368290..23368299, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:40184895..40184905,-#_7ef2d81038af2048d85b5f1ce872e9f8 | p@chr2:40184895..40184905, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr11:69867159..69867175,-#_7ef2d81038af2048d85b5f1ce872e9f8 | p3@ENST00000528507 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:98870790..98870795,+#_7ef2d81038af2048d85b5f1ce872e9f8 | p7@MYH16 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr4:143369478..143369483,-#_8eb07627df64b75029751f3383172d8a | p@chr4:143369478..143369483, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr4:143369478..143369483,-#_8eb07627df64b75029751f3383172d8a | p@chr4:143369478..143369483, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr13:107026326..107026335,-#_8eb07627df64b75029751f3383172d8a | p@chr13:107026326..107026335, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr19:51462404..51462413,-#_8eb07627df64b75029751f3383172d8a | p@chr19:51462404..51462413, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr13:107026326..107026335,-#_8eb07627df64b75029751f3383172d8a | p@chr13:107026326..107026335, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr19:51462404..51462413,-#_8eb07627df64b75029751f3383172d8a | p@chr19:51462404..51462413, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr6:1054763..1054800,-#_8eb07627df64b75029751f3383172d8a | p@chr6:1054763..1054800, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr6:1054763..1054800,-#_8eb07627df64b75029751f3383172d8a | p@chr6:1054763..1054800, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr19:49545674..49545685,+#_8eb07627df64b75029751f3383172d8a | p@chr19:49545674..49545685, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr19:49545674..49545685,+#_8eb07627df64b75029751f3383172d8a | p@chr19:49545674..49545685, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:98870435..98870449,+#_d490dbc54e5bb9ecaca328f4a59dbfed | p6@MYH16 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:98870435..98870449,+#_d490dbc54e5bb9ecaca328f4a59dbfed | p6@MYH16 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:170626681..170626687,+#_d490dbc54e5bb9ecaca328f4a59dbfed | p@chr3:170626681..170626687, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:170626681..170626687,+#_d490dbc54e5bb9ecaca328f4a59dbfed | p@chr3:170626681..170626687, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr10:114885594..114885600,+#_03f5353bb40942df8e5c2ddd289b8a69 | p@chr10:114885594..114885600, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr20:56234717..56234758,-#_03f5353bb40942df8e5c2ddd289b8a69 | p@chr20:56234717..56234758, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr20:56234717..56234758,-#_03f5353bb40942df8e5c2ddd289b8a69 | p@chr20:56234717..56234758, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr10:114885594..114885600,+#_03f5353bb40942df8e5c2ddd289b8a69 | p@chr10:114885594..114885600, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr19:51471381..51471383,-#_a5729199e468281f43f71c21af6b7f71 | p14@KLK6 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr7:98740685..98740699,-#_a5729199e468281f43f71c21af6b7f71 | p@chr7:98740685..98740699, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr7:98740685..98740699,-#_a5729199e468281f43f71c21af6b7f71 | p@chr7:98740685..98740699, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr19:51471381..51471383,-#_a5729199e468281f43f71c21af6b7f71 | p14@KLK6 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:70636802..70636818,+#_a5729199e468281f43f71c21af6b7f71 | p@chr17:70636802..70636818, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:70636802..70636818,+#_a5729199e468281f43f71c21af6b7f71 | p@chr17:70636802..70636818, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr10:5501962..5501964,+#_5f8d5931be1e691ce8c49cb53f8ac968 | p@chr10:5501962..5501964, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr7:98870934..98870947,+#_5f8d5931be1e691ce8c49cb53f8ac968 | p4@MYH16 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr22:43343242..43343291,-#_5f8d5931be1e691ce8c49cb53f8ac968 | p20@PACSIN2 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr7:98870934..98870947,+#_5f8d5931be1e691ce8c49cb53f8ac968 | p4@MYH16 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr10:5652876..5652885,-#_5f8d5931be1e691ce8c49cb53f8ac968 | p5@ENST00000425246 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr7:98870948..98870967,+#_5f8d5931be1e691ce8c49cb53f8ac968 | p3@MYH16 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr22:43343242..43343291,-#_5f8d5931be1e691ce8c49cb53f8ac968 | p20@PACSIN2 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr7:98870948..98870967,+#_5f8d5931be1e691ce8c49cb53f8ac968 | p3@MYH16 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr6:128815342..128815347,-#_5f8d5931be1e691ce8c49cb53f8ac968 | p@chr6:128815342..128815347, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr6:128815342..128815347,-#_5f8d5931be1e691ce8c49cb53f8ac968 | p@chr6:128815342..128815347, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr10:5501962..5501964,+#_5f8d5931be1e691ce8c49cb53f8ac968 | p@chr10:5501962..5501964, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr15:42186162..42186197,-#_5f8d5931be1e691ce8c49cb53f8ac968 | p1@SPTBN5 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr10:5652876..5652885,-#_5f8d5931be1e691ce8c49cb53f8ac968 | p5@ENST00000425246 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr15:42186162..42186197,-#_5f8d5931be1e691ce8c49cb53f8ac968 | p1@SPTBN5 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr8:139755835..139755842,-#_abcb3f677b707dd7050c9508f5f5ff3b | p@chr8:139755835..139755842, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr10:101691118..101691135,-#_abcb3f677b707dd7050c9508f5f5ff3b | p6@DNMBP |
| 6.58e-50 | FFCP PHASE2:Hg19::chr10:101691084..101691100,-#_abcb3f677b707dd7050c9508f5f5ff3b | p8@DNMBP |
| 6.58e-50 | FFCP PHASE2:Hg19::chr1:46954560..46954569,+#_abcb3f677b707dd7050c9508f5f5ff3b | p@chr1:46954560..46954569, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr1:46954560..46954569,+#_abcb3f677b707dd7050c9508f5f5ff3b | p@chr1:46954560..46954569, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr10:101691118..101691135,-#_abcb3f677b707dd7050c9508f5f5ff3b | p6@DNMBP |
| 6.58e-50 | FFCP PHASE2:Hg19::chr19:51523347..51523358,-#_abcb3f677b707dd7050c9508f5f5ff3b | p11@KLK10 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr19:51523347..51523358,-#_abcb3f677b707dd7050c9508f5f5ff3b | p11@KLK10 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr10:101691084..101691100,-#_abcb3f677b707dd7050c9508f5f5ff3b | p8@DNMBP |
| 6.58e-50 | FFCP PHASE1:Hg19::chr8:139755835..139755842,-#_abcb3f677b707dd7050c9508f5f5ff3b | p@chr8:139755835..139755842, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr7:98805698..98805708,-#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr7:98805698..98805708, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr2:30440814..30440823,+#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr2:30440814..30440823, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr10:30046722..30046725,-#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr10:30046722..30046725, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr2:30440814..30440823,+#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr2:30440814..30440823, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr9:132337391..132337396,+#_6326a64d223aac8035eb2ac2b3ab1551 | p2@ENST00000443993, p2@uc004bya.1 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr10:5652892..5652903,-#_6326a64d223aac8035eb2ac2b3ab1551 | p2@ENST00000425246 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr9:132337391..132337396,+#_6326a64d223aac8035eb2ac2b3ab1551 | p2@ENST00000443993, p2@uc004bya.1 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr3:139253550..139253585,+#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr3:139253550..139253585, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr3:139253550..139253585,+#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr3:139253550..139253585, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr3:98671855..98671858,+#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr3:98671855..98671858, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr17:47091824..47091833,+#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr17:47091824..47091833, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr17:47091824..47091833,+#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr17:47091824..47091833, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr3:98671855..98671858,+#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr3:98671855..98671858, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr10:30046722..30046725,-#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr10:30046722..30046725, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr10:5652892..5652903,-#_6326a64d223aac8035eb2ac2b3ab1551 | p2@ENST00000425246 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr7:98805698..98805708,-#_6326a64d223aac8035eb2ac2b3ab1551 | p@chr7:98805698..98805708, - |
| 9.91e-41 | FFCP PHASE1:Hg19::chr8:143317560..143317581,-#_7a762aad9e38728688329e08020585af | p@chr8:143317560..143317581, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr8:143317560..143317581,-#_7a762aad9e38728688329e08020585af | p@chr8:143317560..143317581, - |
