UBERON:0006915: Difference between revisions
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|located_in= | |located_in= | ||
|name=stratified squamous epithelium | |name=stratified squamous epithelium | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 17:59, 12 September 2014
| Name: | stratified squamous epithelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Multilaminar epithelium which consists of more than one layer of squamous cells only one layer of which is in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, epithelium of wall of esophagus.[FMA]" [FMA:45563] | ||
| Xrefs: |
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| Synonyms: | "epithelium stratificatum squamosum" EXACT [FMA:45563] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000486(multilaminar epithelium),UBERON:0006914(squamous epithelium) |
|---|
Children
| is a: | UBERON:0001949 (gingival epithelium),UBERON:0002018 (synovial membrane of synovial joint) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 11291-117A4 (Synoviocyte, donor1)
- 11368-117I9 (Synoviocyte, donor2)
- 11440-118H9 (Synoviocyte, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006915 (stratified squamous epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.24e-88 | FFCP PHASE2:Hg19::chr7:80546293..80546302,-#_9d3dda18fd2a95976fc08440df98cd4f | p31@SEMA3C |
| 6.24e-88 | FFCP PHASE1:Hg19::chr7:80546293..80546302,-#_9d3dda18fd2a95976fc08440df98cd4f | p31@SEMA3C |
| 1.71e-66 | FFCP PHASE2:Hg19::chr18:22150956..22150983,+#_e6efa9632d678298529a6cddbb59185b | p@chr18:22150956..22150983, + |
| 1.71e-66 | FFCP PHASE1:Hg19::chr18:22150956..22150983,+#_e6efa9632d678298529a6cddbb59185b | p@chr18:22150956..22150983, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:181751144..181751146,+#_38e49902865eb3c5a2b81a2eda9e4e4d | p@chr2:181751144..181751146, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:172134736..172134739,+#_38e49902865eb3c5a2b81a2eda9e4e4d | p@chr1:172134736..172134739, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:181751144..181751146,+#_38e49902865eb3c5a2b81a2eda9e4e4d | p@chr2:181751144..181751146, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:130786785..130786827,-#_38e49902865eb3c5a2b81a2eda9e4e4d | p@chr12:130786785..130786827, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:172134736..172134739,+#_38e49902865eb3c5a2b81a2eda9e4e4d | p@chr1:172134736..172134739, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr15:68117826..68117829,+#_38e49902865eb3c5a2b81a2eda9e4e4d | p9@SKOR1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:172134755..172134764,+#_38e49902865eb3c5a2b81a2eda9e4e4d | p@chr1:172134755..172134764, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:68117826..68117829,+#_38e49902865eb3c5a2b81a2eda9e4e4d | p9@SKOR1 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:172134755..172134764,+#_38e49902865eb3c5a2b81a2eda9e4e4d | p@chr1:172134755..172134764, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr8:37411632..37411639,-#_38e49902865eb3c5a2b81a2eda9e4e4d | p1@ENST00000517363 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr8:37411632..37411639,-#_38e49902865eb3c5a2b81a2eda9e4e4d | p1@ENST00000517363 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:172134667..172134711,+#_38e49902865eb3c5a2b81a2eda9e4e4d | p@chr1:172134667..172134711, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:172134667..172134711,+#_38e49902865eb3c5a2b81a2eda9e4e4d | p@chr1:172134667..172134711, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:130786785..130786827,-#_38e49902865eb3c5a2b81a2eda9e4e4d | p@chr12:130786785..130786827, - |
| 1.68e-53 | FFCP PHASE2:Hg19::chr8:25337208..25337219,+#_c6a48631bf856367d495b5be3c9bb818 | p5@CDCA2 |
| 1.68e-53 | FFCP PHASE1:Hg19::chr8:25337208..25337219,+#_c6a48631bf856367d495b5be3c9bb818 | p5@CDCA2 |
| 2.19e-53 | FFCP PHASE2:Hg19::chr2:242009429..242009432,+#_a2387d8da6551ea99a0bf2737c55be3f | p@chr2:242009429..242009432, + |
| 2.19e-53 | FFCP PHASE1:Hg19::chr2:242009429..242009432,+#_a2387d8da6551ea99a0bf2737c55be3f | p@chr2:242009429..242009432, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr12:131476821..131476831,-#_ce4aeceb25a8a3e210c9487a5114877c | p@chr12:131476821..131476831, - |
| 2.87e-53 | FFCP PHASE2:Hg19::chr12:131476821..131476831,-#_ce4aeceb25a8a3e210c9487a5114877c | p@chr12:131476821..131476831, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chrY:58884631..58884640,+#_4f5359ca06e77609d1523870eaaa8059 | p@chrY:58884631..58884640, + |
| 1.22e-44 | FFCP PHASE1:Hg19::chrY:58884631..58884640,+#_4f5359ca06e77609d1523870eaaa8059 | p@chrY:58884631..58884640, + |
| 1.8e-38 | FFCP PHASE2:Hg19::chr1:142537706..142537723,-#_d9a21033730d8c4a74753e546f3aa0d3 | p@chr1:142537706..142537723, - |
| 1.8e-38 | FFCP PHASE1:Hg19::chr1:142537706..142537723,-#_d9a21033730d8c4a74753e546f3aa0d3 | p@chr1:142537706..142537723, - |
| 1.85e-36 | FFCP PHASE1:Hg19::chr10:131634104..131634108,-#_365c49c8c0d783d184e85edb71ae22c1 | p@chr10:131634104..131634108, - |
| 1.85e-36 | FFCP PHASE2:Hg19::chr10:131634104..131634108,-#_365c49c8c0d783d184e85edb71ae22c1 | p@chr10:131634104..131634108, - |
| 3.33e-34 | FFCP PHASE2:Hg19::chr17:9066265..9066271,+#_a0c6748aa87dc758dfc22dfdc0663e0c | p@chr17:9066265..9066271, + |
| 3.33e-34 | FFCP PHASE1:Hg19::chr17:9066265..9066271,+#_a0c6748aa87dc758dfc22dfdc0663e0c | p@chr17:9066265..9066271, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr12:91435143..91435151,-#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr12:91435143..91435151, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr12:54379011..54379016,+#_8250fd4948b95a9a3f7e1780611c52a6 | p15@HOXC10 |
| 4.27e-34 | FFCP PHASE1:Hg19::chr12:91435143..91435151,-#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr12:91435143..91435151, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr10:135140510..135140524,-#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr10:135140510..135140524, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr12:54379011..54379016,+#_8250fd4948b95a9a3f7e1780611c52a6 | p15@HOXC10 |
| 4.27e-34 | FFCP PHASE2:Hg19::chr5:1043105..1043109,+#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr5:1043105..1043109, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr15:68124311..68124318,+#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr15:68124311..68124318, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr10:135140510..135140524,-#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr10:135140510..135140524, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr12:130646534..130646542,+#_8250fd4948b95a9a3f7e1780611c52a6 | p5@FZD10 |
| 4.27e-34 | FFCP PHASE1:Hg19::chr5:1043105..1043109,+#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr5:1043105..1043109, + |
| 4.27e-34 | FFCP PHASE1:Hg19::chr8:78774585..78774589,-#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr8:78774585..78774589, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr15:68124311..68124318,+#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr15:68124311..68124318, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr8:78774585..78774589,-#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr8:78774585..78774589, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr12:130646534..130646542,+#_8250fd4948b95a9a3f7e1780611c52a6 | p5@FZD10 |
| 4.27e-34 | FFCP PHASE2:Hg19::chr4:139010162..139010169,+#_8250fd4948b95a9a3f7e1780611c52a6 | p1@LOC641364 |
| 4.27e-34 | FFCP PHASE2:Hg19::chr8:37411648..37411657,-#_8250fd4948b95a9a3f7e1780611c52a6 | p1@ENST00000519738 |
| 4.27e-34 | FFCP PHASE1:Hg19::chr4:139010162..139010169,+#_8250fd4948b95a9a3f7e1780611c52a6 | p1@LOC641364 |
| 4.27e-34 | FFCP PHASE1:Hg19::chr8:37411648..37411657,-#_8250fd4948b95a9a3f7e1780611c52a6 | p1@ENST00000519738 |
| 4.27e-34 | FFCP PHASE2:Hg19::chr15:68118244..68118272,+#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr15:68118244..68118272, + |
| 4.27e-34 | FFCP PHASE1:Hg19::chr15:68118244..68118272,+#_8250fd4948b95a9a3f7e1780611c52a6 | p@chr15:68118244..68118272, + |
| 5.51e-34 | FFCP PHASE2:Hg19::chr15:89402148..89402159,+#_dbdb30367bc89daf41b147121af42639 | p6@ACAN |
| 5.51e-34 | FFCP PHASE1:Hg19::chr15:89402148..89402159,+#_dbdb30367bc89daf41b147121af42639 | p6@ACAN |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:42072877..42072881,-#_4bd3043c005865dad6e593d96eb6c73c | p11@C6orf132 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:42072877..42072881,-#_4bd3043c005865dad6e593d96eb6c73c | p11@C6orf132 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr12:54366780..54366791,+#_4bd3043c005865dad6e593d96eb6c73c | p12@HOXC11 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr12:54366780..54366791,+#_4bd3043c005865dad6e593d96eb6c73c | p12@HOXC11 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr15:68117844..68117858,+#_4bd3043c005865dad6e593d96eb6c73c | p3@SKOR1 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr15:68117844..68117858,+#_4bd3043c005865dad6e593d96eb6c73c | p3@SKOR1 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr17:63705566..63705573,-#_4bd3043c005865dad6e593d96eb6c73c | p@chr17:63705566..63705573, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr17:63705566..63705573,-#_4bd3043c005865dad6e593d96eb6c73c | p@chr17:63705566..63705573, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:172145683..172145699,+#_4bd3043c005865dad6e593d96eb6c73c | p@chr1:172145683..172145699, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr1:172145683..172145699,+#_4bd3043c005865dad6e593d96eb6c73c | p@chr1:172145683..172145699, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr13:73102090..73102097,-#_4bd3043c005865dad6e593d96eb6c73c | p@chr13:73102090..73102097, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr13:73102090..73102097,-#_4bd3043c005865dad6e593d96eb6c73c | p@chr13:73102090..73102097, - |
| 7.7e-34 | FFCP PHASE2:Hg19::chrY:13450855..13450866,+#_545ac469961733244ab3bee648b0166d | p@chrY:13450855..13450866, + |
| 7.7e-34 | FFCP PHASE1:Hg19::chrY:13450855..13450866,+#_545ac469961733244ab3bee648b0166d | p@chrY:13450855..13450866, + |
| 1.46e-31 | FFCP PHASE2:Hg19::chr19:18718172..18718197,+#_ef31ed4396e916a452a46a5d7654233e | p@chr19:18718172..18718197, + |
| 1.46e-31 | FFCP PHASE1:Hg19::chr19:18718172..18718197,+#_ef31ed4396e916a452a46a5d7654233e | p@chr19:18718172..18718197, + |
| 1.71e-30 | FFCP PHASE2:Hg19::chr21:39821025..39821046,-#_d84e0283340b6bbf5307a43b7311e0fc | p9@ERG |
| 1.71e-30 | FFCP PHASE1:Hg19::chr21:39821025..39821046,-#_d84e0283340b6bbf5307a43b7311e0fc | p9@ERG |
| 2.3e-30 | FFCP PHASE2:Hg19::chr15:89402048..89402061,+#_fb81e1905e89d54c78049bc8e9a59604 | p8@ACAN |
| 2.3e-30 | FFCP PHASE1:Hg19::chr1:186273262..186273282,+#_fb81e1905e89d54c78049bc8e9a59604 | p@chr1:186273262..186273282, + |
| 2.3e-30 | FFCP PHASE1:Hg19::chr15:89402048..89402061,+#_fb81e1905e89d54c78049bc8e9a59604 | p8@ACAN |
| 2.3e-30 | FFCP PHASE2:Hg19::chr1:186273262..186273282,+#_fb81e1905e89d54c78049bc8e9a59604 | p@chr1:186273262..186273282, + |
| 7.54e-30 | FFCP PHASE1:Hg19::chr1:186276427..186276448,+#_f0a2fc269055bd4e5188cb8214f584a2 | p@chr1:186276427..186276448, + |
| 7.54e-30 | FFCP PHASE2:Hg19::chr1:186276427..186276448,+#_f0a2fc269055bd4e5188cb8214f584a2 | p@chr1:186276427..186276448, + |
| 8.12e-28 | FFCP PHASE2:Hg19::chr7:80373118..80373135,-#_c19449e2193b9b9497d972505b6e92f2 | p21@SEMA3C |
| 8.12e-28 | FFCP PHASE1:Hg19::chr7:80373118..80373135,-#_c19449e2193b9b9497d972505b6e92f2 | p21@SEMA3C |
| 1.39e-27 | FFCP PHASE2:Hg19::chr20:48160907..48160918,-#_c371f86b598dd6014ee6eed1aba3e7cc | p@chr20:48160907..48160918, - |
| 1.39e-27 | FFCP PHASE1:Hg19::chr20:48160907..48160918,-#_c371f86b598dd6014ee6eed1aba3e7cc | p@chr20:48160907..48160918, - |
| 1.82e-27 | FFCP PHASE2:Hg19::chr3:156877038..156877058,-#_ab25dfa9c3663550762d430e50ad0340 | p35@CCNL1 |
| 1.82e-27 | FFCP PHASE1:Hg19::chr3:156877038..156877058,-#_ab25dfa9c3663550762d430e50ad0340 | p35@CCNL1 |
| 1.82e-27 | FFCP PHASE2:Hg19::chr1:142537912..142537938,-#_ab25dfa9c3663550762d430e50ad0340 | p@chr1:142537912..142537938, - |
| 1.82e-27 | FFCP PHASE1:Hg19::chr1:142537912..142537938,-#_ab25dfa9c3663550762d430e50ad0340 | p@chr1:142537912..142537938, - |
| 1.82e-27 | FFCP PHASE2:Hg19::chr20:43343646..43343655,+#_ab25dfa9c3663550762d430e50ad0340 | p7@WISP2 |
| 1.82e-27 | FFCP PHASE1:Hg19::chr20:43343646..43343655,+#_ab25dfa9c3663550762d430e50ad0340 | p7@WISP2 |
| 2.08e-27 | FFCP PHASE1:Hg19::chr6:1609602..1609636,-#_f0ae658a40eebf33358330b778676fd3 | p@chr6:1609602..1609636, - |
| 2.08e-27 | FFCP PHASE2:Hg19::chr1:142539672..142539687,-#_f0ae658a40eebf33358330b778676fd3 | p@chr1:142539672..142539687, - |
| 2.08e-27 | FFCP PHASE1:Hg19::chr1:142539672..142539687,-#_f0ae658a40eebf33358330b778676fd3 | p@chr1:142539672..142539687, - |
| 2.08e-27 | FFCP PHASE2:Hg19::chr6:1609602..1609636,-#_f0ae658a40eebf33358330b778676fd3 | p@chr6:1609602..1609636, - |
| 2.38e-27 | FFCP PHASE2:Hg19::chr21:39705323..39705334,-#_4f17daa263e4dacbc3c0e933dd3140cf | p2@ENST00000436845 |
| 2.38e-27 | FFCP PHASE1:Hg19::chr21:39705323..39705334,-#_4f17daa263e4dacbc3c0e933dd3140cf | p2@ENST00000436845 |
| 3.11e-27 | FFCP PHASE2:Hg19::chr6:31918397..31918412,+#_9b76c053d9d93cdc2c9436d60e849f97 | p15@CFB |
| 3.11e-27 | FFCP PHASE2:Hg19::chr16:15680784..15680797,+#_9b76c053d9d93cdc2c9436d60e849f97 | p@chr16:15680784..15680797, + |
| 3.11e-27 | FFCP PHASE1:Hg19::chr6:31918397..31918412,+#_9b76c053d9d93cdc2c9436d60e849f97 | p15@CFB |
| 3.11e-27 | FFCP PHASE1:Hg19::chr16:15680784..15680797,+#_9b76c053d9d93cdc2c9436d60e849f97 | p@chr16:15680784..15680797, + |
| 4.07e-27 | FFCP PHASE1:Hg19::chr8:70476088..70476102,+#_fa2dddc807d6e7f3fbf0f3051b1651f6 | p21@SULF1 |
| 4.07e-27 | FFCP PHASE2:Hg19::chr8:70476088..70476102,+#_fa2dddc807d6e7f3fbf0f3051b1651f6 | p21@SULF1 |
