FFCP PHASE2:Hg19::chr2:240158575..240158585,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9759 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14063 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14063 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 06:22, 16 September 2015
| Short description: | p25@HDAC4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_25_at_HDAC4_5end |
| Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
| Association with transcript: | -210bp_to_ENST00000496347_5end |
| EntrezGene: | HDAC4 |
| HGNC: | 14063 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p25@HDAC4 |
|---|
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0.5
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1.5
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2.5
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3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mast cell | 1.56e-71 | 5 |
| basophil mast progenitor cell | 1.56e-71 | 5 |
| endocrine cell | 2.91e-40 | 9 |
| secretory cell | 9.21e-11 | 36 |
| granulocyte monocyte progenitor cell | 5.22e-10 | 67 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.23e-10 | 98 |
| blood island | 1.23e-10 | 98 |
| hemolymphoid system | 1.03e-09 | 108 |
| bone marrow | 6.50e-09 | 76 |
| bone element | 2.59e-08 | 82 |
| skeletal element | 1.24e-07 | 90 |
| immune system | 2.08e-07 | 93 |
| skeletal system | 6.20e-07 | 100 |
Showing 1 to 8 of 8 entries
