FFCP PHASE2:Mm9::chr11:68505408..68505413,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:77579 |HGNC= |TSSclassifier=NA |UniProt=uniprot:Q61879,uniprot:Q3UH59,uniprot:Q8BXF2 |association_with_transcript=-...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=77579 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q61879,Q3UH59,Q8BXF2 | ||
|association_with_transcript=-3bp_to_ENSMUST00000102611,NM_175260,uc007jnx.1,uc007jny.1_5end | |association_with_transcript=-3bp_to_ENSMUST00000102611,NM_175260,uc007jnx.1,uc007jny.1_5end | ||
|cluster_id=chr11:68505408..68505413,+ | |cluster_id=chr11:68505408..68505413,+ | ||
Latest revision as of 23:24, 1 October 2015
| Short description: | p8@Myh10 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_8_at_Myh10_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -3bp_to_ENSMUST00000102611, NM_175260, uc007jnx.1, uc007jny.1_5end |
| EntrezGene: | Myh10 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p8@Myh10 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| raphe nuclei neuron | 3.67e-34 | 3 |
| neuron of the substantia nigra | 2.85e-15 | 3 |
| CNS neuron (sensu Vertebrata) | 3.19e-12 | 23 |
| neuroblast (sensu Vertebrata) | 3.19e-12 | 23 |
| neuron | 1.41e-08 | 33 |
| neuronal stem cell | 1.41e-08 | 33 |
| neuroblast | 1.41e-08 | 33 |
| electrically signaling cell | 1.41e-08 | 33 |
| electrically responsive cell | 2.80e-07 | 39 |
| electrically active cell | 2.80e-07 | 39 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| raphe nuclei | 3.67e-34 | 3 |
| reticular formation | 3.67e-34 | 3 |
| substantia nigra | 2.85e-15 | 3 |
| telencephalic nucleus | 2.85e-15 | 3 |
| midbrain nucleus | 2.85e-15 | 3 |
| neural nucleus | 2.85e-15 | 3 |
| nucleus of brain | 2.85e-15 | 3 |
| regional part of midbrain | 1.04e-11 | 4 |
| midbrain | 1.04e-11 | 4 |
| presumptive midbrain | 1.04e-11 | 4 |
Showing 1 to 10 of 11 entries
