Personal tools

FFCP PHASE1:Mm9::chr11:90110801..90110817,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:90110801..90110817,+
|short_description=p2@Mmd
|description=CAGE_peak_2_at_Mmd_5end
|association_with_transcript=11bp_to_ENSMUST00000004050,NM_026178_5end
|EntrezGene=67468
|EntrezGene=67468
|HGNC=
|HGNC=
|UniProt=Q9CQY7
|UniProt=Q9CQY7
|association_with_transcript=11bp_to_ENSMUST00000004050,NM_026178_5end
|description=CAGE_peak_2_at_Mmd_5end
|id=chr11:90110801..90110817,+
|ontology_enrichment_disease=
|phase1_expression=6.24580503708696,5.58360652222978,5.91499011206397,11.4936400296595,11.0197060588196,4.53274034162102,4.90586545250604,12.9123323441576,12.1078301050433,14.2779361056416,20.2037202506096,15.0769380501186,4.45121897821135,6.11942816932982,1.33243904726265,3.03712901084739,1.39912375625629,7.41336088591859,6.44437837946972,7.21462408056651,8.24919914465377,3.27660138962921,2.61199789138935,7.1996590257033,6.65286915094793,6.89078356938024,3.4460959692726,4.52489588640367,8.7410772949932,10.5852654499171,2.66076612786366,0.635030673459631,0,0,10.3986583110459,12.4675984018869,11.0251452381679,2.51118978442145,7.813353445238,3.14114246384279,2.94115744015507,4.09827290975067,2.91306211818692,9.56815816614387,9.7321853970734,12.114085642671,7.82391344348039,8.06693078607652,12.0827400503959,9.52706505463989,10.2190087786515,11.5002051491977,3.18786951509699,5.80289713609076,9.07453257684653,8.2323019531503,1.71920063963254,6.18806510732931,20.2316460859598,11.1088105647127,9.50747105259269,8.13226876965917,4.4464739805557,9.44894703145469,12.8552627133707,8.5257613793532,5.39280198933128,8.83702102239575,11.3021677416241,11.6105106965254,9.88527318351495,8.85518051651791,11.2642955885323,11.8816075238505,9.68039257284187,9.19218786610021,5.50579404996943,8.81042632787795,10.9060638611933,16.8814448294648,18.0230657896747,12.5019208933622,4.4669279840221,6.19038871034848,14.0574387954665,10.606629077052,11.5321061447273,12.1159639786445,1.36307147999731,1.73814588245607,11.0148505706638,15.487629785665,5.439770669662,17.810205324048,14.2950811838487,14.7848872742121,10.5333315098814,5.96506129023202,3.63700406444016,3.5333957451034,3.23939865486365,5.13305909657271,7.64415719119937,7.11066703153331,2.16491041011214,0.760079596425296,1.01104889002957,8.44960709921044,7.76813650941515,5.64080128446334,5.89850111004862,6.08930956624282,3.68984795609694,4.52167921657868,5.40908052824242,7.6656620711102,3.70792451601561,23.7142945348655,4.42305275974937,5.17653919831709,3.75430581382669,4.84875253135222,5.59175283654366,5.27005434620785,4.39838084308256,8.43008282188352,7.78798309288482,8.39863823390771,6.98886248901856,10.3355541189328,20.1300265240196,14.0732874366408,25.7259993884569,26.0829766476937,9.3504620051802,18.1710214635889,7.94347038032467,5.349499736234,2.77995034277042,7.15502310014011,7.1566243629487,5.74755261083682,7.38254732201932,6.78171680260718,6.80364991513279,7.17436833595159,7.40243624021858,6.20888089773638,9.05385570317937,6.80781888604149,7.2139960907219,7.67185063496512,3.33656699070717,4.179025998266,6.37924622864625,7.76233640592123,8.42655824775882,10.2939162845886,7.10408748488982,13.8774267598786,13.6025114789036,16.9258337773354,14.678173606283,14.5605531493079,14.1925743856388,16.0448421877781,10.9992094573844,15.5297905348335,15.1395061920402,13.1333971263276,14.4302480991623,10.5263990946239,10.7579556492615,9.5286557319864,47.1049484783645,9.2614151141356,3.30418782983798,11.1069237998689,9.17139477301506,8.59275685883622,8.37638498593607,8.87407508342707,7.11609740303585,6.84812254005213,7.11793592316767,11.6936257854048,13.8234364840148,12.3353012665514,7.79856348476481,6.29173586057955,9.94235029423593,9.95706366271836,7.58671603812327,5.48392860526698,6.76246414038483,7.33144780243131,3.87904974335251,5.82127305089644,9.99137286563265,8.26616828685772,6.12295038581362,6.91024117962083,15.7119892356189,2.16898637430922,3.34150291692445,4.49724224769707,3.24576194221605,5.788251834058,8.40265310878685,10.9324532231308,9.56597837972709,11.5315793538994,7.18841032636773,14.1413560114031,11.5453939052387,10.6083128737787,17.5809465251474,16.8855232477179,10.9004382198297,7.20067364727842,5.86673915191293,7.29903868833309,6.57132695207806,9.5478566741835,9.04565835366852,9.75668239288994,10.8768249433272,10.6303051031412,10.3645599627367,10.9788420859544,10.3610989119537,9.83613598354279,12.0633027151418,2.71952841909355,4.91764273019036,3.86311444826625,5.77982123956051,6.68106613575558,14.2623402477708,5.04941854408746,5.99465616890888,6.24701990874622,6.46270193198397,4.06246956519338,4.23317480756549,3.67999490025482,5.26253912177363,6.72188473196017,3.95287777946523,9.63963949265421,5.53566332312248,6.94455854302295,11.8907480328111,7.4236555337641,2.65490276679926,2.91336763385978,3.32555912661226,1.88605079755898,2.95301892880773,4.30409207121498,5.16856586336442,3.99887102425256,4.27796854061666,2.84433082142234,4.21674434299995,1.03135543248187,8.17055053809091,5.58189391497062,5.04498866752743,5.14408884075822,3.72414490648775,6.0645397984704,5.10101963866575,7.00269382963578,3.75474732901937,5.50763384245932,1.7642271844397,3.46261131177108,7.58882805470756,7.11692514152239,6.2073618881631,4.26766339337159,12.5336759750836,5.19190845629427,4.10090113914846,6.19160603889667,5.92622487583077,3.76736914009382,2.05041341581538,4.11800711771741,10.538662659619,11.3360676382163,11.1941978781583,5.72802370809068,9.01557581706236,5.28630614529807,5.72428306355547,4.18176592028937,5.45906409365444,7.41753905116514,6.36431609085087,3.92633912976044,7.12882353104861,1.86401793926078,0,6.42921147989109,8.43838301331198,5.63908446197738,6.19967152693109,6.08242051766801,7.51086327332825,6.77062801188541,5.7672639434141,1.69108884578204,3.74439008135225,14.220500428268,2.8381530140623,4.72470402958205,5.06691209613401,8.95133478337407,7.9472541912506,7.3319224207181,8.27061352177632,9.38987984517773,9.83067805849498,8.06609481094724,7.60171469770069,9.62118416403295,6.42822961998629,1.58711268530648,5.99362074109975,3.05027112472217,2.3503846290971,9.07991091951295,7.13193406714492,4.57879060668163,5.57357785605571,2.00628841614145,17.5073071211291,19.3336599333014,16.6139698897425,20.7942350635862,15.7568979547248,14.3524840504043,16.8755625057951,18.0128481289688,17.2194115413998,21.7459330935764,7.26511433089237,7.18244772121856,7.34154504742777,8.75184181445858,6.07878171621149,7.16989682955055,9.11211583986622,9.27157757575024,7.70206103020357,7.07552192938633,9.63221339582911,10.7517014590063,7.02311306024118,8.45132011744274,8.55788487438638,10.0021675169445,9.618399053423,9.83837024364896,9.06588981767275,6.77115032618228,8.9146005620208,6.74408063405482,9.29901140794552,7.55801366488108,8.84628175904108,8.54607539705933,8.78054269789308,7.89209134313529,9.37048385536446,14.5896990631012,9.84670650430645,8.0773675547962,4.91077251803627,9.91595783590182,7.13754460630223,9.242991383704,6.78401664491684,7.52048689169044,8.22539827896026,10.3677966986172,9.50658126043728
|phase1_expression=6.24580503708696,5.58360652222978,5.91499011206397,11.4936400296595,11.0197060588196,4.53274034162102,4.90586545250604,12.9123323441576,12.1078301050433,14.2779361056416,20.2037202506096,15.0769380501186,4.45121897821135,6.11942816932982,1.33243904726265,3.03712901084739,1.39912375625629,7.41336088591859,6.44437837946972,7.21462408056651,8.24919914465377,3.27660138962921,2.61199789138935,7.1996590257033,6.65286915094793,6.89078356938024,3.4460959692726,4.52489588640367,8.7410772949932,10.5852654499171,2.66076612786366,0.635030673459631,0,0,10.3986583110459,12.4675984018869,11.0251452381679,2.51118978442145,7.813353445238,3.14114246384279,2.94115744015507,4.09827290975067,2.91306211818692,9.56815816614387,9.7321853970734,12.114085642671,7.82391344348039,8.06693078607652,12.0827400503959,9.52706505463989,10.2190087786515,11.5002051491977,3.18786951509699,5.80289713609076,9.07453257684653,8.2323019531503,1.71920063963254,6.18806510732931,20.2316460859598,11.1088105647127,9.50747105259269,8.13226876965917,4.4464739805557,9.44894703145469,12.8552627133707,8.5257613793532,5.39280198933128,8.83702102239575,11.3021677416241,11.6105106965254,9.88527318351495,8.85518051651791,11.2642955885323,11.8816075238505,9.68039257284187,9.19218786610021,5.50579404996943,8.81042632787795,10.9060638611933,16.8814448294648,18.0230657896747,12.5019208933622,4.4669279840221,6.19038871034848,14.0574387954665,10.606629077052,11.5321061447273,12.1159639786445,1.36307147999731,1.73814588245607,11.0148505706638,15.487629785665,5.439770669662,17.810205324048,14.2950811838487,14.7848872742121,10.5333315098814,5.96506129023202,3.63700406444016,3.5333957451034,3.23939865486365,5.13305909657271,7.64415719119937,7.11066703153331,2.16491041011214,0.760079596425296,1.01104889002957,8.44960709921044,7.76813650941515,5.64080128446334,5.89850111004862,6.08930956624282,3.68984795609694,4.52167921657868,5.40908052824242,7.6656620711102,3.70792451601561,23.7142945348655,4.42305275974937,5.17653919831709,3.75430581382669,4.84875253135222,5.59175283654366,5.27005434620785,4.39838084308256,8.43008282188352,7.78798309288482,8.39863823390771,6.98886248901856,10.3355541189328,20.1300265240196,14.0732874366408,25.7259993884569,26.0829766476937,9.3504620051802,18.1710214635889,7.94347038032467,5.349499736234,2.77995034277042,7.15502310014011,7.1566243629487,5.74755261083682,7.38254732201932,6.78171680260718,6.80364991513279,7.17436833595159,7.40243624021858,6.20888089773638,9.05385570317937,6.80781888604149,7.2139960907219,7.67185063496512,3.33656699070717,4.179025998266,6.37924622864625,7.76233640592123,8.42655824775882,10.2939162845886,7.10408748488982,13.8774267598786,13.6025114789036,16.9258337773354,14.678173606283,14.5605531493079,14.1925743856388,16.0448421877781,10.9992094573844,15.5297905348335,15.1395061920402,13.1333971263276,14.4302480991623,10.5263990946239,10.7579556492615,9.5286557319864,47.1049484783645,9.2614151141356,3.30418782983798,11.1069237998689,9.17139477301506,8.59275685883622,8.37638498593607,8.87407508342707,7.11609740303585,6.84812254005213,7.11793592316767,11.6936257854048,13.8234364840148,12.3353012665514,7.79856348476481,6.29173586057955,9.94235029423593,9.95706366271836,7.58671603812327,5.48392860526698,6.76246414038483,7.33144780243131,3.87904974335251,5.82127305089644,9.99137286563265,8.26616828685772,6.12295038581362,6.91024117962083,15.7119892356189,2.16898637430922,3.34150291692445,4.49724224769707,3.24576194221605,5.788251834058,8.40265310878685,10.9324532231308,9.56597837972709,11.5315793538994,7.18841032636773,14.1413560114031,11.5453939052387,10.6083128737787,17.5809465251474,16.8855232477179,10.9004382198297,7.20067364727842,5.86673915191293,7.29903868833309,6.57132695207806,9.5478566741835,9.04565835366852,9.75668239288994,10.8768249433272,10.6303051031412,10.3645599627367,10.9788420859544,10.3610989119537,9.83613598354279,12.0633027151418,2.71952841909355,4.91764273019036,3.86311444826625,5.77982123956051,6.68106613575558,14.2623402477708,5.04941854408746,5.99465616890888,6.24701990874622,6.46270193198397,4.06246956519338,4.23317480756549,3.67999490025482,5.26253912177363,6.72188473196017,3.95287777946523,9.63963949265421,5.53566332312248,6.94455854302295,11.8907480328111,7.4236555337641,2.65490276679926,2.91336763385978,3.32555912661226,1.88605079755898,2.95301892880773,4.30409207121498,5.16856586336442,3.99887102425256,4.27796854061666,2.84433082142234,4.21674434299995,1.03135543248187,8.17055053809091,5.58189391497062,5.04498866752743,5.14408884075822,3.72414490648775,6.0645397984704,5.10101963866575,7.00269382963578,3.75474732901937,5.50763384245932,1.7642271844397,3.46261131177108,7.58882805470756,7.11692514152239,6.2073618881631,4.26766339337159,12.5336759750836,5.19190845629427,4.10090113914846,6.19160603889667,5.92622487583077,3.76736914009382,2.05041341581538,4.11800711771741,10.538662659619,11.3360676382163,11.1941978781583,5.72802370809068,9.01557581706236,5.28630614529807,5.72428306355547,4.18176592028937,5.45906409365444,7.41753905116514,6.36431609085087,3.92633912976044,7.12882353104861,1.86401793926078,0,6.42921147989109,8.43838301331198,5.63908446197738,6.19967152693109,6.08242051766801,7.51086327332825,6.77062801188541,5.7672639434141,1.69108884578204,3.74439008135225,14.220500428268,2.8381530140623,4.72470402958205,5.06691209613401,8.95133478337407,7.9472541912506,7.3319224207181,8.27061352177632,9.38987984517773,9.83067805849498,8.06609481094724,7.60171469770069,9.62118416403295,6.42822961998629,1.58711268530648,5.99362074109975,3.05027112472217,2.3503846290971,9.07991091951295,7.13193406714492,4.57879060668163,5.57357785605571,2.00628841614145,17.5073071211291,19.3336599333014,16.6139698897425,20.7942350635862,15.7568979547248,14.3524840504043,16.8755625057951,18.0128481289688,17.2194115413998,21.7459330935764,7.26511433089237,7.18244772121856,7.34154504742777,8.75184181445858,6.07878171621149,7.16989682955055,9.11211583986622,9.27157757575024,7.70206103020357,7.07552192938633,9.63221339582911,10.7517014590063,7.02311306024118,8.45132011744274,8.55788487438638,10.0021675169445,9.618399053423,9.83837024364896,9.06588981767275,6.77115032618228,8.9146005620208,6.74408063405482,9.29901140794552,7.55801366488108,8.84628175904108,8.54607539705933,8.78054269789308,7.89209134313529,9.37048385536446,14.5896990631012,9.84670650430645,8.0773675547962,4.91077251803627,9.91595783590182,7.13754460630223,9.242991383704,6.78401664491684,7.52048689169044,8.22539827896026,10.3677966986172,9.50658126043728
|short_description=p2@Mmd
}}
}}

Revision as of 17:55, 17 April 2012

Short description:p2@Mmd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Mmd_5end
Coexpression cluster:NA
Association with transcript: 11bp_to_ENSMUST00000004050, NM_026178_5end
EntrezGene:Mmd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Mmd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.49
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.12
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.44
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B98.74
Ileum epithelium, pool2.CNhs13232.10253-104C110.59
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.73
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.11
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.23
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C320.23
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.13
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.30
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.26
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.12
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.81
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F614.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.45
accessory axillary lymph node, adult.CNhs10475.1063-29H97.77
adrenal gland, adult.CNhs10508.49-24D75.64
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F54.52
adrenal gland, neonate N00.CNhs11191.1311-23C15.41
adrenal gland, neonate N25.CNhs11223.1377-27I37.67
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H123.71
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H78.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.99
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F114.07
cortex, adult.CNhs10473.12-14D525.73
cortex, neonate N30.CNhs11107.1392-42F226.08
diencephalon, adult.CNhs10482.20-12F29.35
diencephalon, neonate N30.CNhs11201.1388-42B218.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.94
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.35
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C67.16
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C66.80
eyeball, neonate N01.CNhs11140.1532-43E77.17
eyeball, neonate N02.CNhs11205.1551-44G87.40
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E29.05
forelimb, embryo E12.CNhs10600.359-14H26.81
forelimb, embryo E13.CNhs10589.384-1E27.21
forelimb, embryo E14.CNhs10577.413-26A87.67
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E913.88
heart, embryo E12.CNhs11015.353-12F513.60
heart, embryo E13.CNhs11013.376-3I916.93
heart, embryo E14.CNhs10597.403-26D414.68
heart, embryo E15.CNhs11017.431-16C814.56
heart, embryo E16.CNhs11021.457-17C614.19
heart, embryo E17.CNhs11025.479-18E516.04
heart, embryo E18.CNhs11030.1283-20G311.00
heart, neonate N00.CNhs11213.639-21E315.53
heart, neonate N03.CNhs11221.1349-25I215.14
heart, neonate N10.CNhs11118.749-24G113.13
heart, neonate N16.CNhs11209.782-15G114.43
heart, neonate N20.CNhs11127.821-26I610.53
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D29.53
hippocampus, adult.CNhs10478.13-16E847.10
hippocampus, neonate N00.CNhs11228.627-43G19.26
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A311.11
intestine, embryo E12.CNhs11019.1251-16I59.17
intestine, embryo E13.CNhs11010.381-16D58.59
intestine, embryo E15.CNhs10602.976-16D88.38
intestine, embryo E16.CNhs10585.463-22H48.87
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E911.69
intestine, neonate N06.CNhs11102.688-20B813.82
intestine, neonate N07.CNhs11095.720-20F212.34
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E39.94
intestine, neonate N30.CNhs11131.1384-42G19.96
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F85.48
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I27.33
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G75.82
kidney, neonate N10.CNhs11206.758-6D59.99
kidney, neonate N20.CNhs11113.832-19I18.27
kidney, neonate N25.CNhs11122.1353-25F36.12
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B215.71
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G410.93
liver, neonate N00.CNhs11117.641-24F49.57
liver, neonate N03.CNhs11123.1345-25G211.53
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H214.14
liver, neonate N10.CNhs11115.751-24B911.55
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H117.58
liver, neonate N30.CNhs11106.1382-42D116.89
lung, adult.CNhs10474.28-22B110.90
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F85.87
lung, embryo E15.CNhs11020.432-17C57.30
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A69.55
lung, embryo E18.CNhs10583.1287-20I69.05
lung, neonate N00.CNhs11224.640-42C69.76
lung, neonate N06.CNhs11212.683-20E510.88
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E610.36
lung, neonate N20.CNhs11109.822-18A410.98
lung, neonate N25.CNhs11119.1359-25C710.36
lung, neonate N30.CNhs11133.1394-42H29.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I75.54
ovary, embryo E18.CNhs11040.505-44H76.94
ovary, neonate N00.CNhs11217.1299-22I411.89
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C75.04
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G47.59
skin, neonate N03.CNhs11215.662-22H37.12
skin, neonate N06.CNhs11097.693-20I56.21
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I112.53
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G24.10
spleen, embryo E16.CNhs11035.461-43C16.19
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.19
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E39.02
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D45.72
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A96.36
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I17.13
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F56.43
testis, embryo E15.CNhs11034.443-27C58.44
testis, embryo E16.CNhs11033.470-26G55.64
testis, embryo E17.CNhs11029.486-18I56.20
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B77.51
testis, neonate N07.CNhs11222.726-26I46.77
testis, neonate N10.CNhs11204.763-44D95.77
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B514.22
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C55.07
thymus, embryo E17.CNhs10581.478-18C18.95
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F87.33
thymus, neonate N03.CNhs11137.2104-43C78.27
thymus, neonate N06.CNhs11197.681-26C49.39
thymus, neonate N07.CNhs11211.713-19D39.83
thymus, neonate N10.CNhs11194.748-24E48.07
thymus, neonate N20.CNhs11186.820-7A27.60
thymus, neonate N25.CNhs11125.1362-25G79.62
thymus, neonate N30.CNhs11132.1393-42G26.43
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E49.08
uterus, adult pregnant day19.CNhs10497.590-15F57.13
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D55.57
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A117.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I87.27
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H27.34
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F27.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.92
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I59.24
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C68.23
whole body, neonate N06.CNhs10515.692-21D110.37
whole body, neonate N10.CNhs10518.761-6B49.51





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:90110801..90110817,%2B&oldid=745964"