Personal tools

FFCP PHASE1:Mm9::chr11:93857371..93857380,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:93857371..93857380,+
|short_description=p4@Spag9
|description=CAGE_peak_4_at_Spag9_5end
|association_with_transcript=-24bp_to_ENSMUST00000092778,ENSMUST00000100565,ENSMUST00000103169,ENSMUST00000132772,NM_001199203,NM_001199204,NM_027569,uc007kxv.1,uc007kxw.1,uc007kxx.1,uc007kxy.1,uc011ycs.1_5end
|EntrezGene=70834
|EntrezGene=70834
|HGNC=
|HGNC=
|UniProt=E9Q460,Q58A65,B8X349,Q6PA03
|UniProt=E9Q460,Q58A65,B8X349,Q6PA03
|association_with_transcript=-24bp_to_ENSMUST00000092778,ENSMUST00000100565,ENSMUST00000103169,ENSMUST00000132772,NM_001199203,NM_001199204,NM_027569,uc007kxv.1,uc007kxw.1,uc007kxx.1,uc007kxy.1,uc011ycs.1_5end
|description=CAGE_peak_4_at_Spag9_5end
|id=chr11:93857371..93857380,+
|ontology_enrichment_disease=
|phase1_expression=7.04654927261093,5.93258192986914,10.9199817453489,7.56160528267075,5.50985302940982,2.68606835059024,3.73780224952841,3.22808308603941,3.801295498095,5.85161315804984,0.513653904676515,1.91453181588807,3.93761678841773,3.4093956943409,1.99865857089398,3.44207954562704,2.79824751251259,4.57420139769445,5.89592064504677,3.81950686618227,5.69790044012167,3.57447424323187,3.6567970479451,2.71987118748791,3.21172993494038,1.72269589234506,3.4460959692726,3.23206849028834,1.33016393619462,2.26827116783938,1.55211357458713,1.27006134691926,1.23012957516914,0,2.59966457776147,1.66234645358492,2.45003227514843,3.76678467663217,3.1253413780952,4.18818995179039,2.94115744015507,4.78131839470912,3.88408282424923,6.04304726282771,5.67710814829281,3.12029478674859,0,0.436050312760893,1.09843091367236,0.777719596297134,1.67983705950435,0,4.36234775750115,6.5282592781021,6.04968838456435,2.82985379639542,4.87106847895886,3.09403255366465,5.05791152148994,2.11596391708813,1.26766280701236,0.677689064138264,0,2.6996991518442,0,0.7104801149461,1.49800055259202,2.30530983192933,3.94020526772215,3.10513658162888,4.20649922702764,5.99867067247988,2.65042249141936,3.79721477566358,1.72521847832825,2.75765635983006,5.50579404996943,7.40586560894089,6.60508093001847,3.03338461779446,3.56801810049398,3.64639359389732,3.62937898701795,3.93933827022176,6.87592114995646,3.83017161115768,7.26095572075425,5.03278503728312,5.45228591998925,7.17929821014462,6.66688324013859,6.88339101585109,0,2.15881276655127,1.29955283489534,1.34408066129201,3.23022166303029,2.55645483867087,2.33807404142582,1.7666978725517,4.22530259330042,3.84979432242953,2.54805239706646,7.11066703153331,1.29894624606728,0.760079596425296,1.01104889002957,2.51204535381932,4.14300613835475,6.67989625791711,3.12273588179045,4.26251669636998,5.07354093963329,5.12456977878917,6.82014501387088,3.76999773989026,6.17987419335935,6.50697106139602,7.96149496754887,7.76480879747564,5.30019644304944,6.30337829075789,0,8.49064311333487,6.28340120440365,3.83185582812887,2.75574786363617,1.19980546198682,1.77898317902291,7.04016005202667,9.60751265919116,8.29318723944905,8.34356736922927,12.0186264945255,6.44142938134636,6.81413304884582,7.12875546952214,6.71797641294502,5.81262344397452,5.6819301089348,4.03373373184381,3.90833577536904,2.70093194708024,5.27466862425003,7.0757959117381,6.27757229395764,5.15359485078509,10.8655415710387,3.01795190105979,4.53854592402766,4.57472922826267,2.41115305670332,7.78532297831674,7.3132954969655,5.96768195583036,4.37875387000685,1.40442637462647,1.02939162845886,1.42081749697796,3.10688658803253,5.8631514995274,5.94204802821349,6.39210786080068,5.1158700254325,6.63348585415727,6.51095045301142,5.36546802799238,6.07179780309281,7.07607354627966,10.0142153088248,11.1874957173281,9.79539915749726,9.44065495751518,8.45500438190342,6.72927835405207,6.79170441703277,7.59963200862735,2.64450566663544,6.18535926552179,6.50262681209228,3.35055399437443,2.42020229548011,3.11329261382818,4.75564065281398,4.2707615539006,4.77626968699632,6.53471542880701,4.97391180102877,5.8489226135736,3.59527763461689,2.80979464837102,5.37681437786791,0.948339504765408,5.1411830674378,2.25415471346161,6.31319116320474,5.43066964069352,5.75113723100612,7.52514791778662,6.7900668070617,4.86696056308262,4.56569506510662,1.48226313543574,2.8363667971736,1.96558995113203,2.02375901146368,3.44862206360455,2.65294875727659,2.29163266603278,4.02774592431135,4.21551589615092,3.56929837144506,21.5652309791032,4.46569137202204,3.74445207737473,2.52578877947112,3.94674309748207,3.85954817090694,6.09685527549795,2.84237117655727,6.02970412835496,6.11082308790677,6.57132695207806,5.52770649557992,6.42717830392237,12.0982861671835,9.77337893458384,9.52298165489732,11.3212885746816,8.68475567993411,8.63424909329478,9.25753974921674,4.52373851817817,2.71952841909355,2.95058563811422,8.00216564283724,7.70642831941401,10.5490517932983,4.91804836130026,7.32165688892682,4.10160685241134,5.46614242015294,6.67812532971677,5.25731355495614,4.23317480756549,3.67999490025482,3.64329631507405,3.50707029493574,4.34816555741176,9.3183181762324,5.53566332312248,3.38324646967785,9.77321756121457,7.4236555337641,6.63725691699814,2.18502572539483,6.65111825322452,3.96070667487386,3.83892460745005,5.84126781093462,7.49442050187841,9.08834323693764,6.06045543254026,5.37262488490887,4.21674434299995,7.21948802737308,5.10659408630682,6.66226047915848,2.32845630808958,6.85878512101095,4.96552654198366,6.77801506887868,9.05019613311665,2.74018454203139,6.57080782578389,8.26145076368899,6.83638033970382,9.23363016472288,9.52640117505843,7.84068024066026,7.28171298419132,6.23735419031233,3.78925087618806,6.11903496634682,4.61351378154202,4.74689796315412,5.00025223898222,3.57900068308913,4.10082683163076,3.20289442489132,3.56954702987096,4.75834937900437,3.45499934511059,2.86401185404534,3.79603192297362,5.28630614529807,6.04829908602087,7.10900206449194,4.36725127492355,5.25970950900801,6.69492991375221,4.4498510137285,3.49960427887841,6.21339313086926,3.94585057078933,6.42921147989109,2.81279433777066,6.02798683866548,3.87479470433193,5.06868376472335,5.51579021635044,5.33837977860195,5.03324853243412,2.65742532908607,5.18454011264158,3.79213344753814,2.02725215290164,4.31386020092274,3.11809975146708,3.75956060901711,3.57626438606277,4.56742708175882,3.10148007066612,4.4425237977185,5.02964923922999,5.74709255279991,4.67797827550812,3.94468550725351,5.02570679380746,5.8949899739955,6.43759264784788,4.03712354742641,7.55480773638353,4.82973985080476,5.44279178808428,4.39563898241436,5.35920947697665,6.01886524842436,6.7770221114048,9.20650473014354,8.59343270159095,8.07709957015332,4.7955776383945,7.55393897389701,12.8254275044043,7.65546045481175,10.8754178156209,7.24864436452548,3.00983307994112,5.98537310101547,4.95127456686989,5.34834777550247,5.24032906569956,6.25067928730048,6.44515510624684,4.32673620201678,3.85103051510178,7.83361356467772,5.32306529769503,6.41329560712659,6.55490552289177,7.36289252655997,6.43277252302869,5.23923060411381,8.80720877180902,10.0312794641127,8.65380391686944,7.35994600671987,9.25746981440622,7.0990322463735,6.43777712857767,6.1045494985578,7.24642229198046,7.69992931814256,6.95126296916536,5.78753365163254,5.83957689537206,7.2948495315506,8.06718123244384,8.27437651954733,5.72923460437565,7.59190521811233,6.75173138433995,4.49659040288303,5.84829021113521,5.37177635120746,7.46024495068489,6.61774257358547,4.86922454802885
|phase1_expression=7.04654927261093,5.93258192986914,10.9199817453489,7.56160528267075,5.50985302940982,2.68606835059024,3.73780224952841,3.22808308603941,3.801295498095,5.85161315804984,0.513653904676515,1.91453181588807,3.93761678841773,3.4093956943409,1.99865857089398,3.44207954562704,2.79824751251259,4.57420139769445,5.89592064504677,3.81950686618227,5.69790044012167,3.57447424323187,3.6567970479451,2.71987118748791,3.21172993494038,1.72269589234506,3.4460959692726,3.23206849028834,1.33016393619462,2.26827116783938,1.55211357458713,1.27006134691926,1.23012957516914,0,2.59966457776147,1.66234645358492,2.45003227514843,3.76678467663217,3.1253413780952,4.18818995179039,2.94115744015507,4.78131839470912,3.88408282424923,6.04304726282771,5.67710814829281,3.12029478674859,0,0.436050312760893,1.09843091367236,0.777719596297134,1.67983705950435,0,4.36234775750115,6.5282592781021,6.04968838456435,2.82985379639542,4.87106847895886,3.09403255366465,5.05791152148994,2.11596391708813,1.26766280701236,0.677689064138264,0,2.6996991518442,0,0.7104801149461,1.49800055259202,2.30530983192933,3.94020526772215,3.10513658162888,4.20649922702764,5.99867067247988,2.65042249141936,3.79721477566358,1.72521847832825,2.75765635983006,5.50579404996943,7.40586560894089,6.60508093001847,3.03338461779446,3.56801810049398,3.64639359389732,3.62937898701795,3.93933827022176,6.87592114995646,3.83017161115768,7.26095572075425,5.03278503728312,5.45228591998925,7.17929821014462,6.66688324013859,6.88339101585109,0,2.15881276655127,1.29955283489534,1.34408066129201,3.23022166303029,2.55645483867087,2.33807404142582,1.7666978725517,4.22530259330042,3.84979432242953,2.54805239706646,7.11066703153331,1.29894624606728,0.760079596425296,1.01104889002957,2.51204535381932,4.14300613835475,6.67989625791711,3.12273588179045,4.26251669636998,5.07354093963329,5.12456977878917,6.82014501387088,3.76999773989026,6.17987419335935,6.50697106139602,7.96149496754887,7.76480879747564,5.30019644304944,6.30337829075789,0,8.49064311333487,6.28340120440365,3.83185582812887,2.75574786363617,1.19980546198682,1.77898317902291,7.04016005202667,9.60751265919116,8.29318723944905,8.34356736922927,12.0186264945255,6.44142938134636,6.81413304884582,7.12875546952214,6.71797641294502,5.81262344397452,5.6819301089348,4.03373373184381,3.90833577536904,2.70093194708024,5.27466862425003,7.0757959117381,6.27757229395764,5.15359485078509,10.8655415710387,3.01795190105979,4.53854592402766,4.57472922826267,2.41115305670332,7.78532297831674,7.3132954969655,5.96768195583036,4.37875387000685,1.40442637462647,1.02939162845886,1.42081749697796,3.10688658803253,5.8631514995274,5.94204802821349,6.39210786080068,5.1158700254325,6.63348585415727,6.51095045301142,5.36546802799238,6.07179780309281,7.07607354627966,10.0142153088248,11.1874957173281,9.79539915749726,9.44065495751518,8.45500438190342,6.72927835405207,6.79170441703277,7.59963200862735,2.64450566663544,6.18535926552179,6.50262681209228,3.35055399437443,2.42020229548011,3.11329261382818,4.75564065281398,4.2707615539006,4.77626968699632,6.53471542880701,4.97391180102877,5.8489226135736,3.59527763461689,2.80979464837102,5.37681437786791,0.948339504765408,5.1411830674378,2.25415471346161,6.31319116320474,5.43066964069352,5.75113723100612,7.52514791778662,6.7900668070617,4.86696056308262,4.56569506510662,1.48226313543574,2.8363667971736,1.96558995113203,2.02375901146368,3.44862206360455,2.65294875727659,2.29163266603278,4.02774592431135,4.21551589615092,3.56929837144506,21.5652309791032,4.46569137202204,3.74445207737473,2.52578877947112,3.94674309748207,3.85954817090694,6.09685527549795,2.84237117655727,6.02970412835496,6.11082308790677,6.57132695207806,5.52770649557992,6.42717830392237,12.0982861671835,9.77337893458384,9.52298165489732,11.3212885746816,8.68475567993411,8.63424909329478,9.25753974921674,4.52373851817817,2.71952841909355,2.95058563811422,8.00216564283724,7.70642831941401,10.5490517932983,4.91804836130026,7.32165688892682,4.10160685241134,5.46614242015294,6.67812532971677,5.25731355495614,4.23317480756549,3.67999490025482,3.64329631507405,3.50707029493574,4.34816555741176,9.3183181762324,5.53566332312248,3.38324646967785,9.77321756121457,7.4236555337641,6.63725691699814,2.18502572539483,6.65111825322452,3.96070667487386,3.83892460745005,5.84126781093462,7.49442050187841,9.08834323693764,6.06045543254026,5.37262488490887,4.21674434299995,7.21948802737308,5.10659408630682,6.66226047915848,2.32845630808958,6.85878512101095,4.96552654198366,6.77801506887868,9.05019613311665,2.74018454203139,6.57080782578389,8.26145076368899,6.83638033970382,9.23363016472288,9.52640117505843,7.84068024066026,7.28171298419132,6.23735419031233,3.78925087618806,6.11903496634682,4.61351378154202,4.74689796315412,5.00025223898222,3.57900068308913,4.10082683163076,3.20289442489132,3.56954702987096,4.75834937900437,3.45499934511059,2.86401185404534,3.79603192297362,5.28630614529807,6.04829908602087,7.10900206449194,4.36725127492355,5.25970950900801,6.69492991375221,4.4498510137285,3.49960427887841,6.21339313086926,3.94585057078933,6.42921147989109,2.81279433777066,6.02798683866548,3.87479470433193,5.06868376472335,5.51579021635044,5.33837977860195,5.03324853243412,2.65742532908607,5.18454011264158,3.79213344753814,2.02725215290164,4.31386020092274,3.11809975146708,3.75956060901711,3.57626438606277,4.56742708175882,3.10148007066612,4.4425237977185,5.02964923922999,5.74709255279991,4.67797827550812,3.94468550725351,5.02570679380746,5.8949899739955,6.43759264784788,4.03712354742641,7.55480773638353,4.82973985080476,5.44279178808428,4.39563898241436,5.35920947697665,6.01886524842436,6.7770221114048,9.20650473014354,8.59343270159095,8.07709957015332,4.7955776383945,7.55393897389701,12.8254275044043,7.65546045481175,10.8754178156209,7.24864436452548,3.00983307994112,5.98537310101547,4.95127456686989,5.34834777550247,5.24032906569956,6.25067928730048,6.44515510624684,4.32673620201678,3.85103051510178,7.83361356467772,5.32306529769503,6.41329560712659,6.55490552289177,7.36289252655997,6.43277252302869,5.23923060411381,8.80720877180902,10.0312794641127,8.65380391686944,7.35994600671987,9.25746981440622,7.0990322463735,6.43777712857767,6.1045494985578,7.24642229198046,7.69992931814256,6.95126296916536,5.78753365163254,5.83957689537206,7.2948495315506,8.06718123244384,8.27437651954733,5.72923460437565,7.59190521811233,6.75173138433995,4.49659040288303,5.84829021113521,5.37177635120746,7.46024495068489,6.61774257358547,4.86922454802885
|short_description=p4@Spag9
}}
}}

Revision as of 17:56, 17 April 2012

Short description:p4@Spag9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Spag9_5end
Coexpression cluster:NA
Association with transcript: -24bp_to_ENSMUST00000092778, ENSMUST00000100565, ENSMUST00000103169, ENSMUST00000132772, NM_001199203, NM_001199204, NM_027569, uc007kxv.1, uc007kxw.1, uc007kxx.1, uc007kxy.1, uc011ycs.1_5end
EntrezGene:Spag9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Spag9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.56
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.41
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.90
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.68
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D95.45
Mouse Schwann, donor2.CNhs12573.11746-123F97.18
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D76.68
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C16.82
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H16.51
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F57.76
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F18.29
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B26.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.13
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.72
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C64.03
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C67.08
eyeball, neonate N01.CNhs11140.1532-43E76.28
eyeball, neonate N02.CNhs11205.1551-44G85.15
eyeball, neonate N16.CNhs11188.777-19A210.87
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C66.63
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I27.08
heart, neonate N10.CNhs11118.749-24G110.01
heart, neonate N16.CNhs11209.782-15G111.19
heart, neonate N20.CNhs11127.821-26I69.80
heart, neonate N25.CNhs11196.1351-25D39.44
heart, neonate N30.CNhs11202.1390-42D28.46
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I37.60
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F24.97
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F85.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G75.75
kidney, neonate N10.CNhs11206.758-6D57.53
kidney, neonate N20.CNhs11113.832-19I16.79
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B16.10
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F86.03
lung, embryo E15.CNhs11020.432-17C56.11
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C612.10
lung, neonate N06.CNhs11212.683-20E59.77
lung, neonate N07.CNhs11111.715-19A39.52
lung, neonate N10.CNhs11219.750-23E611.32
lung, neonate N20.CNhs11109.822-18A48.68
lung, neonate N25.CNhs11119.1359-25C78.63
lung, neonate N30.CNhs11133.1394-42H29.26
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H28.00
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A310.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I75.54
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I49.77
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G97.49
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E66.66
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F59.05
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F86.84
skin, adult.CNhs10492.30-1C39.23
skin, neonate N00.CNhs11124.650-25G49.53
skin, neonate N03.CNhs11215.662-22H37.84
skin, neonate N06.CNhs11097.693-20I57.28
skin, neonate N10.CNhs11108.762-6C46.24
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F25.00
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D46.05
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A96.69
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I13.50
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F56.43
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D95.03
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I24.31
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F84.57
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C44.44
thymus, neonate N07.CNhs11211.713-19D35.03
thymus, neonate N10.CNhs11194.748-24E45.75
thymus, neonate N20.CNhs11186.820-7A24.68
thymus, neonate N25.CNhs11125.1362-25G73.94
thymus, neonate N30.CNhs11132.1393-42G25.03
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.04
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.55
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E54.40
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.25
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.59
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B44.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:93857371..93857380,%2B&oldid=746059"