Personal tools

FFCP PHASE1:Mm9::chr3:143868129..143868172,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:143868129..143868172,-
|short_description=p1@Lmo4
|description=CAGE_peak_1_at_Lmo4_5end
|association_with_transcript=0bp_to_ENSMUST00000134961_5end
|EntrezGene=16911
|EntrezGene=16911
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000134961_5end
|description=CAGE_peak_1_at_Lmo4_5end
|id=chr3:143868129..143868172,-
|ontology_enrichment_disease=
|phase1_expression=13.6126520039075,1.39590163055744,1.36499771816861,3.0246421130683,6.51164448930251,4.53274034162102,6.77476657727024,8.52213934714403,16.04991432529,17.0867104215055,2.91070545983358,3.11111420081812,8.9024379564227,9.9659258757657,8.66085380720723,3.84703008040669,2.09868563438444,13.5648731104042,11.1062691220648,6.36584477697045,26.3634199468316,18.170244069762,12.5375898786689,7.67963629408352,8.48814339948529,0.57423196411502,1.29228598847722,3.44753972297422,10.2612646506442,2.01624103807945,3.54768817048488,6.98533740805594,2.46025915033828,0,7.22129049378186,4.98703936075477,4.08338712524738,124.722425959599,138.296355980713,80.0991328279911,136.469705223195,119.532959867728,90.3049256637946,51.8694890059378,48.5595500541475,69.0135788127923,348.164148234877,84.8117858319937,99.2981545959813,99.9369681241817,113.668974359794,100.62679505548,16.7782606057736,8.70434570413613,11.4271891708438,77.9496091188919,83.9542979020557,120.667269592921,14.9714181036102,32.797440714866,24.719424736741,46.7605454255402,96.9331327761142,45.8948855813513,61.3097144791524,57.5488893106341,87.1836321608558,164.445434677625,14.6202353354953,22.0059679480656,14.7227472945967,30.8503063156108,26.0624878322904,47.7714116938321,49.072881161337,63.4260962760914,26.4278114398533,25.154405602782,24.2698322544865,13.58428763621,16.0103376304217,16.1483144872596,13.4007839520663,17.4456409109821,28.2676758387099,27.6950870345248,27.0506193518296,20.3175395949578,43.4668349732476,56.8298132003027,27.8269909153611,6.88339101585109,31.9586526842643,9.71465744948071,6.49776417447669,17.4730485967961,24.5777735230566,30.5070277414723,17.6654483129951,22.6137327686618,22.2532603247155,17.9657068380045,124.854567456256,49.7746692207332,19.0512116089868,19.7620695070577,25.2762222507392,24.777901899036,11.3932668804756,30.4306385082891,20.8182392119363,30.7510133095263,30.2106301405437,39.4893318247871,35.9821443835257,34.9353123896498,12.8541383221874,52.7787652757678,72.5380652598897,23.6179600923217,25.1759331044849,20.8496358848145,48.4618579167118,14.3462590535658,10.2628886338593,15.5828803677241,18.5713442984176,14.3976655438418,17.0274104277907,25.314618059415,64.5075849974263,112.711953845239,107.597254199019,69.0431734791892,35.5317556196848,30.5013574567384,18.8402823123085,29.1112311227618,21.734157225296,81.4409982280654,21.9903548606969,15.6333431014762,17.8261508507296,18.2352829581215,16.0566137997134,20.1138540847214,15.3670828277955,47.0840134745008,43.1135985865684,32.1480336285293,39.4130518127245,44.9351251476528,41.4290401346141,38.3077383174383,34.3656167801266,9.35461054046918,21.066395619397,25.4774428043568,34.3837834268667,22.1624576612987,19.2311369184499,21.4273853138608,24.1479630296914,23.8084720414359,18.2035193207106,22.78832658554,20.3887785063711,12.6106569756543,12.341988743511,14.7750717671186,16.7001747664463,15.3509986796599,10.9775057645525,15.4337381574428,85.3777191170357,50.2174508410908,4.62586296177317,13.2225283331772,34.1261200856374,29.9585306699966,24.4848176511977,26.0171746764112,22.9049385160216,17.5007576023554,13.2868137232463,9.88193728344065,15.3314477368164,14.1259095149217,14.8172706210531,16.178749355776,10.3746263939853,11.1519113022446,21.8118086096044,14.3953125888258,22.5415471346161,17.1067115390064,20.1710586654331,14.097299797954,15.9988438924371,17.1227771656338,16.4848664233444,16.5352199655213,14.8226313543574,13.1807633515714,15.1350426237166,15.7403478669398,13.9973483758067,21.2235900582127,16.2960545140109,31.6465751195892,26.5901771911058,10.9824565275233,28.7536413054709,24.1891615984527,8.11297950097858,10.1031551178845,14.351793081753,25.5695066322585,52.8394123876489,12.6959245886225,19.066902243717,24.2735472658519,38.0198202227373,38.6939454690594,61.4152593485915,34.1483883751148,43.5072997733087,47.6149082744866,32.2098632688124,31.7894830548532,36.6092161555699,35.1497212353073,75.3956419696361,132.712986851765,67.371705403608,80.0216564283724,19.7477225684984,15.003095883802,50.1640932852627,12.1186045058099,84.5562028035568,78.868626347921,91.5549440364396,102.756583119597,87.3370802402985,90.5844898524264,87.8439222634521,85.6309663680144,80.2434189231443,35.3453448063988,41.4465048808144,22.0801348547396,19.3835481630756,36.2934270539578,43.8058956521877,27.1914312493579,25.6975023420038,23.5756349694873,29.825491180958,26.1319875752338,15.5056975900933,19.9943551212628,14.2598951353889,27.8112346983518,21.0837217149998,28.8779521094923,27.5756080660568,38.3530130286691,53.0370603509293,49.7261921273294,67.5666290177062,53.6890140982232,56.4403140665275,38.3625835884395,9.62154003061212,19.9122146611991,36.8282424751786,45.343719558907,43.9183240612863,39.7462175276547,54.5531612094334,41.0352249362653,14.2825609948627,25.2178410734293,26.9975991660607,38.5943443091226,36.1129328370938,12.6206866193143,13.2593400889394,10.9813523139131,6.4591803397665,11.8958734475109,8.7065983496787,137.472568994176,31.475431361323,26.2282112593635,27.2173458870939,29.899626330069,23.5831568845872,22.3874814998802,25.2093039962275,41.0956828914927,36.4218074949938,52.8138416123887,12.4012446510522,15.9982704267057,18.3658924407378,28.389873498231,32.677435339866,32.6085322197202,21.8284463881102,18.228613878153,20.657290851865,13.2871266454303,13.2493802878618,40.1334123197786,24.1243006195295,19.7205037756468,15.5904987573354,23.6315238281076,21.8549490259391,14.1830630433563,17.8704327881238,13.7314371929481,16.384463430825,19.9635846570944,25.2415911115959,19.3385801697062,23.8428880450401,24.2601510468276,15.9829886429327,13.3673646348119,7.89057696911169,81.7191982756165,19.1436124960206,31.5020793739696,27.0104157639623,46.6462056752888,121.421646162669,93.4460230109569,122.026744362591,136.451426780888,87.0054800108716,81.5825409180877,103.278442535466,115.732549228625,101.957042021446,100.963260791605,22.6256417733505,32.7200396188845,20.4880326904961,43.5161023552246,31.2323612315694,35.6656406393027,31.781282075631,24.9302419259062,30.4873249112224,25.5224183881435,37.2614570838652,26.7849404768228,27.8115277185551,22.4088033417042,21.3659944514881,24.7672719467198,23.4086338408608,19.6767404872979,22.2526386433786,19.8718542181436,22.286501405052,27.5087499546973,22.8898742349428,25.5809693272898,21.927485636772,21.6613396202692,19.7562210702594,26.5700408552221,23.9015240368717,19.0788372363631,14.4734722111492,16.9427709685969,27.8277109355389,22.0010314484072,26.0423924824541,43.7168511391405,25.7324769289949,37.6024344584522,46.4830646927289,36.8387669929591,32.9252326580998
|phase1_expression=13.6126520039075,1.39590163055744,1.36499771816861,3.0246421130683,6.51164448930251,4.53274034162102,6.77476657727024,8.52213934714403,16.04991432529,17.0867104215055,2.91070545983358,3.11111420081812,8.9024379564227,9.9659258757657,8.66085380720723,3.84703008040669,2.09868563438444,13.5648731104042,11.1062691220648,6.36584477697045,26.3634199468316,18.170244069762,12.5375898786689,7.67963629408352,8.48814339948529,0.57423196411502,1.29228598847722,3.44753972297422,10.2612646506442,2.01624103807945,3.54768817048488,6.98533740805594,2.46025915033828,0,7.22129049378186,4.98703936075477,4.08338712524738,124.722425959599,138.296355980713,80.0991328279911,136.469705223195,119.532959867728,90.3049256637946,51.8694890059378,48.5595500541475,69.0135788127923,348.164148234877,84.8117858319937,99.2981545959813,99.9369681241817,113.668974359794,100.62679505548,16.7782606057736,8.70434570413613,11.4271891708438,77.9496091188919,83.9542979020557,120.667269592921,14.9714181036102,32.797440714866,24.719424736741,46.7605454255402,96.9331327761142,45.8948855813513,61.3097144791524,57.5488893106341,87.1836321608558,164.445434677625,14.6202353354953,22.0059679480656,14.7227472945967,30.8503063156108,26.0624878322904,47.7714116938321,49.072881161337,63.4260962760914,26.4278114398533,25.154405602782,24.2698322544865,13.58428763621,16.0103376304217,16.1483144872596,13.4007839520663,17.4456409109821,28.2676758387099,27.6950870345248,27.0506193518296,20.3175395949578,43.4668349732476,56.8298132003027,27.8269909153611,6.88339101585109,31.9586526842643,9.71465744948071,6.49776417447669,17.4730485967961,24.5777735230566,30.5070277414723,17.6654483129951,22.6137327686618,22.2532603247155,17.9657068380045,124.854567456256,49.7746692207332,19.0512116089868,19.7620695070577,25.2762222507392,24.777901899036,11.3932668804756,30.4306385082891,20.8182392119363,30.7510133095263,30.2106301405437,39.4893318247871,35.9821443835257,34.9353123896498,12.8541383221874,52.7787652757678,72.5380652598897,23.6179600923217,25.1759331044849,20.8496358848145,48.4618579167118,14.3462590535658,10.2628886338593,15.5828803677241,18.5713442984176,14.3976655438418,17.0274104277907,25.314618059415,64.5075849974263,112.711953845239,107.597254199019,69.0431734791892,35.5317556196848,30.5013574567384,18.8402823123085,29.1112311227618,21.734157225296,81.4409982280654,21.9903548606969,15.6333431014762,17.8261508507296,18.2352829581215,16.0566137997134,20.1138540847214,15.3670828277955,47.0840134745008,43.1135985865684,32.1480336285293,39.4130518127245,44.9351251476528,41.4290401346141,38.3077383174383,34.3656167801266,9.35461054046918,21.066395619397,25.4774428043568,34.3837834268667,22.1624576612987,19.2311369184499,21.4273853138608,24.1479630296914,23.8084720414359,18.2035193207106,22.78832658554,20.3887785063711,12.6106569756543,12.341988743511,14.7750717671186,16.7001747664463,15.3509986796599,10.9775057645525,15.4337381574428,85.3777191170357,50.2174508410908,4.62586296177317,13.2225283331772,34.1261200856374,29.9585306699966,24.4848176511977,26.0171746764112,22.9049385160216,17.5007576023554,13.2868137232463,9.88193728344065,15.3314477368164,14.1259095149217,14.8172706210531,16.178749355776,10.3746263939853,11.1519113022446,21.8118086096044,14.3953125888258,22.5415471346161,17.1067115390064,20.1710586654331,14.097299797954,15.9988438924371,17.1227771656338,16.4848664233444,16.5352199655213,14.8226313543574,13.1807633515714,15.1350426237166,15.7403478669398,13.9973483758067,21.2235900582127,16.2960545140109,31.6465751195892,26.5901771911058,10.9824565275233,28.7536413054709,24.1891615984527,8.11297950097858,10.1031551178845,14.351793081753,25.5695066322585,52.8394123876489,12.6959245886225,19.066902243717,24.2735472658519,38.0198202227373,38.6939454690594,61.4152593485915,34.1483883751148,43.5072997733087,47.6149082744866,32.2098632688124,31.7894830548532,36.6092161555699,35.1497212353073,75.3956419696361,132.712986851765,67.371705403608,80.0216564283724,19.7477225684984,15.003095883802,50.1640932852627,12.1186045058099,84.5562028035568,78.868626347921,91.5549440364396,102.756583119597,87.3370802402985,90.5844898524264,87.8439222634521,85.6309663680144,80.2434189231443,35.3453448063988,41.4465048808144,22.0801348547396,19.3835481630756,36.2934270539578,43.8058956521877,27.1914312493579,25.6975023420038,23.5756349694873,29.825491180958,26.1319875752338,15.5056975900933,19.9943551212628,14.2598951353889,27.8112346983518,21.0837217149998,28.8779521094923,27.5756080660568,38.3530130286691,53.0370603509293,49.7261921273294,67.5666290177062,53.6890140982232,56.4403140665275,38.3625835884395,9.62154003061212,19.9122146611991,36.8282424751786,45.343719558907,43.9183240612863,39.7462175276547,54.5531612094334,41.0352249362653,14.2825609948627,25.2178410734293,26.9975991660607,38.5943443091226,36.1129328370938,12.6206866193143,13.2593400889394,10.9813523139131,6.4591803397665,11.8958734475109,8.7065983496787,137.472568994176,31.475431361323,26.2282112593635,27.2173458870939,29.899626330069,23.5831568845872,22.3874814998802,25.2093039962275,41.0956828914927,36.4218074949938,52.8138416123887,12.4012446510522,15.9982704267057,18.3658924407378,28.389873498231,32.677435339866,32.6085322197202,21.8284463881102,18.228613878153,20.657290851865,13.2871266454303,13.2493802878618,40.1334123197786,24.1243006195295,19.7205037756468,15.5904987573354,23.6315238281076,21.8549490259391,14.1830630433563,17.8704327881238,13.7314371929481,16.384463430825,19.9635846570944,25.2415911115959,19.3385801697062,23.8428880450401,24.2601510468276,15.9829886429327,13.3673646348119,7.89057696911169,81.7191982756165,19.1436124960206,31.5020793739696,27.0104157639623,46.6462056752888,121.421646162669,93.4460230109569,122.026744362591,136.451426780888,87.0054800108716,81.5825409180877,103.278442535466,115.732549228625,101.957042021446,100.963260791605,22.6256417733505,32.7200396188845,20.4880326904961,43.5161023552246,31.2323612315694,35.6656406393027,31.781282075631,24.9302419259062,30.4873249112224,25.5224183881435,37.2614570838652,26.7849404768228,27.8115277185551,22.4088033417042,21.3659944514881,24.7672719467198,23.4086338408608,19.6767404872979,22.2526386433786,19.8718542181436,22.286501405052,27.5087499546973,22.8898742349428,25.5809693272898,21.927485636772,21.6613396202692,19.7562210702594,26.5700408552221,23.9015240368717,19.0788372363631,14.4734722111492,16.9427709685969,27.8277109355389,22.0010314484072,26.0423924824541,43.7168511391405,25.7324769289949,37.6024344584522,46.4830646927289,36.8387669929591,32.9252326580998
|short_description=p1@Lmo4
}}
}}

Revision as of 12:03, 18 April 2012

Short description:p1@Lmo4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lmo4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000134961_5end
EntrezGene:Lmo4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lmo4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.90
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.97
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.54
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.49
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B910.26
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8124.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1138.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H380.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9136.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2119.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H490.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D851.87
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D948.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B369.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7348.16
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C284.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B899.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C399.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C4113.67
Mouse Astrocytes, donor3.CNhs12107.11633-122C4100.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.78
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.43
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C177.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E183.95
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5120.67
Mouse Granule cells, donor1.CNhs12131.11713-123C314.97
Mouse Granule cells, donor2.CNhs12357.11731-123E332.80
Mouse Granule cells, donor3.CNhs12108.11636-122C724.72
Mouse Meningeal cells, donor1.CNhs12132.11716-123C646.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D196.93
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C745.89
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E761.31
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D257.55
Mouse Microglia, donor1.CNhs12629.11718-123C887.18
Mouse Microglia, donor2.CNhs12634.11736-123E8164.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.01
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F130.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D247.77
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F249.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D663.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.27
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.27
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.05
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.32
Mouse Schwann, donor1.CNhs12507.11728-123D943.47
Mouse Schwann, donor2.CNhs12573.11746-123F956.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G327.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C431.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F617.47
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8124.85
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G325.28
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B624.78
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D730.43
adrenal gland, embryo E14.CNhs11038.406-44C520.82
adrenal gland, embryo E16.CNhs11004.1254-43D630.75
adrenal gland, embryo E17.CNhs11043.1263-45I130.21
adrenal gland, embryo E18.CNhs11026.1262-18F539.49
adrenal gland, neonate N00.CNhs11191.1311-23C135.98
adrenal gland, neonate N25.CNhs11223.1377-27I334.94
amnion, adult pregnant day17.5.CNhs10488.583-22A812.85
aorta, adult.CNhs10498.46-23H152.78
bone (os femoris), adult.CNhs10483.56-12G272.54
bone (os femoris), neonate N02.CNhs11227.1985-43F523.62
bone (os femoris), neonate N16.CNhs11225.1525-43A625.18
bone (os femoris), neonate N20.CNhs11195.1350-25C320.85
cecum, adult.CNhs10467.37-13H448.46
cerebellum, adult.CNhs10494.15-8B214.35
cerebellum, neonate N30.CNhs11135.1395-42I210.26
colon, adult.CNhs10468.36-18H715.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C718.57
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.03
corpora quadrigemina, adult.CNhs10501.16-22A425.31
corpus striatum, adult.CNhs10487.19-21D864.51
corpus striatum, neonate N00.CNhs11226.630-43F1112.71
cortex, adult.CNhs10473.12-14D5107.60
cortex, neonate N30.CNhs11107.1392-42F269.04
diencephalon, adult.CNhs10482.20-12F235.53
diencephalon, neonate N30.CNhs11201.1388-42B230.50
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A229.11
epididymis, adult.CNhs10490.58-23B221.73
eyeball, adult.CNhs10484.31-12G481.44
eyeball, embryo E12.CNhs11016.345-16C621.99
eyeball, embryo E14.CNhs10521.399-16E215.63
eyeball, embryo E15.CNhs10593.426-16C917.83
eyeball, embryo E17.CNhs11023.1261-18D418.24
eyeball, neonate N00.CNhs11207.633-15C616.06
eyeball, neonate N01.CNhs11140.1532-43E720.11
eyeball, neonate N02.CNhs11205.1551-44G815.37
eyeball, neonate N16.CNhs11188.777-19A247.08
forelimb, embryo E11.CNhs10596.335-25E243.11
forelimb, embryo E12.CNhs10600.359-14H232.15
forelimb, embryo E13.CNhs10589.384-1E239.41
forelimb, embryo E14.CNhs10577.413-26A844.94
forelimb, embryo E15.CNhs11007.437-20E741.43
forelimb, embryo E17.CNhs10598.1517-43C438.31
forelimb, embryo E18.CNhs11008.1520-43B534.37
gonad, embryo E13.CNhs11044.1564-45I69.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C821.07
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.48
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D534.38
heart, embryo E11.CNhs10586.331-24E922.16
heart, embryo E12.CNhs11015.353-12F519.23
heart, embryo E13.CNhs11013.376-3I921.43
heart, embryo E14.CNhs10597.403-26D424.15
heart, embryo E15.CNhs11017.431-16C823.81
heart, embryo E16.CNhs11021.457-17C618.20
heart, embryo E17.CNhs11025.479-18E522.79
heart, embryo E18.CNhs11030.1283-20G320.39
heart, neonate N00.CNhs11213.639-21E312.61
heart, neonate N03.CNhs11221.1349-25I212.34
heart, neonate N10.CNhs11118.749-24G114.78
heart, neonate N16.CNhs11209.782-15G116.70
heart, neonate N20.CNhs11127.821-26I615.35
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D215.43
hippocampus, adult.CNhs10478.13-16E885.38
hippocampus, neonate N00.CNhs11228.627-43G150.22
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A313.22
intestine, embryo E12.CNhs11019.1251-16I534.13
intestine, embryo E13.CNhs11010.381-16D529.96
intestine, embryo E15.CNhs10602.976-16D824.48
intestine, embryo E16.CNhs10585.463-22H426.02
intestine, embryo E17.CNhs10582.482-18D322.90
intestine, embryo E18.CNhs10526.1289-20F717.50
intestine, neonate N00.CNhs11126.644-26D113.29
intestine, neonate N01.CNhs11192.1322-23E99.88
intestine, neonate N06.CNhs11102.688-20B815.33
intestine, neonate N07.CNhs11095.720-20F214.13
intestine, neonate N10.CNhs11098.755-23A514.82
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E310.37
intestine, neonate N30.CNhs11131.1384-42G111.15
kidney, embryo E14.CNhs10606.411-4I921.81
kidney, embryo E15.CNhs10997.434-16F814.40
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I217.11
kidney, embryo E18.CNhs11001.1288-20C720.17
kidney, neonate N00.CNhs11214.646-21G714.10
kidney, neonate N10.CNhs11206.758-6D516.00
kidney, neonate N20.CNhs11113.832-19I117.12
kidney, neonate N25.CNhs11122.1353-25F316.48
kidney, neonate N30.CNhs11203.1385-42H116.54
liver, adult pregnant day01.CNhs10466.508-5B214.82
liver, embryo E12.CNhs10601.355-15F813.18
liver, embryo E13.CNhs10524.378-3H615.14
liver, embryo E14.CNhs10594.409-16E115.74
liver, embryo E15.CNhs10520.433-16D714.00
liver, embryo E16.CNhs10523.462-17F521.22
liver, embryo E17.CNhs10510.481-18A316.30
liver, embryo E18.CNhs10579.499-43G431.65
liver, neonate N00.CNhs11117.641-24F426.59
liver, neonate N03.CNhs11123.1345-25G210.98
liver, neonate N06.CNhs11101.684-20A828.75
liver, neonate N07.CNhs11103.716-20H224.19
liver, neonate N10.CNhs11115.751-24B98.11
liver, neonate N20.CNhs11220.823-25A310.10
liver, neonate N25.CNhs11198.1368-26H114.35
liver, neonate N30.CNhs11106.1382-42D125.57
lung, adult.CNhs10474.28-22B152.84
lung, embryo E12.CNhs10522.354-16G212.70
lung, embryo E14.CNhs10604.404-26F819.07
lung, embryo E15.CNhs11020.432-17C524.27
lung, embryo E16.CNhs10998.458-17B638.02
lung, embryo E17.CNhs10605.480-44A638.69
lung, embryo E18.CNhs10583.1287-20I661.42
lung, neonate N00.CNhs11224.640-42C634.15
lung, neonate N06.CNhs11212.683-20E543.51
lung, neonate N07.CNhs11111.715-19A347.61
lung, neonate N10.CNhs11219.750-23E632.21
lung, neonate N20.CNhs11109.822-18A431.79
lung, neonate N25.CNhs11119.1359-25C736.61
lung, neonate N30.CNhs11133.1394-42H235.15
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A175.40
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1132.71
mammary gland, adult lactating day02.CNhs10480.595-22B667.37
mammary gland, adult pregnant day19.CNhs10476.588-5H280.02
medulla oblongata, adult.CNhs10477.17-12C219.75
medulla oblongata, neonate N30.CNhs11200.1396-42A315.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C750.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.12
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E184.56
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E278.87
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E391.55
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7102.76
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D887.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D990.58
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D487.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D585.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D680.24
olfactory brain, adult.CNhs10489.18-22I935.35
ovary, adult.CNhs10507.91-2I741.45
ovary, embryo E18.CNhs11040.505-44H722.08
ovary, neonate N00.CNhs11217.1299-22I419.38
oviduct, adult pregnant day01.CNhs10500.988-6G636.29
pancreas, adult.CNhs10486.34-16E443.81
pancreas, embryo E14.CNhs11012.405-44F427.19
pancreas, embryo E15.CNhs11042.1556-45F225.70
pancreas, embryo E16.CNhs11003.460-26E523.58
pancreas, embryo E17.CNhs10599.1558-45G329.83
pancreas, embryo E18.CNhs10580.1535-43I726.13
pancreas, neonate N00.CNhs11105.645-26G915.51
pancreas, neonate N01.CNhs11138.1531-43D719.99
pancreas, neonate N02.CNhs11139.1539-43D814.26
pancreas, neonate N16.CNhs11136.787-43B627.81
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H528.88
pituitary gland, adult.CNhs10493.21-1G827.58
pituitary gland, embryo E12.CNhs11018.346-16E638.35
pituitary gland, embryo E13.CNhs11009.370-44C753.04
pituitary gland, embryo E14.CNhs11037.398-44A549.73
pituitary gland, embryo E15.CNhs10592.427-16B967.57
pituitary gland, embryo E16.CNhs11036.449-43F653.69
pituitary gland, embryo E17.CNhs11039.1265-44F556.44
pituitary gland, neonate N00.CNhs11190.1308-22E938.36
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G319.91
prostate, adult.CNhs10470.859-1F836.83
skin, adult.CNhs10492.30-1C345.34
skin, neonate N00.CNhs11124.650-25G443.92
skin, neonate N03.CNhs11215.662-22H339.75
skin, neonate N06.CNhs11097.693-20I554.55
skin, neonate N10.CNhs11108.762-6C441.04
small intestine, neonate N16.CNhs11114.790-21I114.28
spinal cord, adult.CNhs10505.24-13C925.22
spleen, adult.CNhs10465.25-2G227.00
spleen, embryo E16.CNhs11035.461-43C138.59
spleen, embryo E18.CNhs11011.1271-21F236.11
spleen, neonate N10.CNhs11116.752-24D112.62
spleen, neonate N20.CNhs11112.824-19H113.26
spleen, neonate N25.CNhs11099.1354-25G310.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.71
stomach, adult.CNhs10503.33-1H6137.47
stomach, embryo E12.CNhs10588.356-43E331.48
stomach, embryo E15.CNhs10603.1252-16G826.23
stomach, embryo E16.CNhs11022.459-17D427.22
stomach, embryo E17.CNhs11006.1035-18D529.90
stomach, embryo E18.CNhs10999.1286-20C623.58
stomach, neonate N03.CNhs11193.1340-24B822.39
stomach, neonate N07.CNhs11210.718-18A925.21
stomach, neonate N25.CNhs11104.1355-25E441.10
stomach, neonate N30.CNhs11134.1386-42I136.42
submandibular gland, adult.CNhs10469.59-29C152.81
testis, adult.CNhs10504.57-7G512.40
testis, embryo E13.CNhs11031.389-23F516.00
testis, embryo E15.CNhs11034.443-27C518.37
testis, embryo E16.CNhs11033.470-26G528.39
testis, embryo E17.CNhs11029.486-18I532.68
testis, embryo E18.CNhs11027.503-18G532.61
testis, neonate N00.CNhs11189.1300-22B721.83
testis, neonate N07.CNhs11222.726-26I418.23
testis, neonate N10.CNhs11204.763-44D920.66
testis, neonate N20.CNhs11110.839-18H313.29
testis, neonate N30.CNhs11130.1391-42E213.25
thymus, adult.CNhs10471.38-12B540.13
thymus, embryo E14.CNhs11041.402-44I424.12
thymus, embryo E15.CNhs11005.430-45I219.72
thymus, embryo E16.CNhs11002.456-26C515.59
thymus, embryo E17.CNhs10581.478-18C123.63
thymus, embryo E18.CNhs10595.1273-19G421.85
thymus, neonate N02.CNhs11181.1541-43F814.18
thymus, neonate N03.CNhs11137.2104-43C717.87
thymus, neonate N06.CNhs11197.681-26C413.73
thymus, neonate N07.CNhs11211.713-19D316.38
thymus, neonate N10.CNhs11194.748-24E419.96
thymus, neonate N20.CNhs11186.820-7A225.24
thymus, neonate N25.CNhs11125.1362-25G719.34
thymus, neonate N30.CNhs11132.1393-42G223.84
tongue, adult.CNhs10499.32-1B424.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.98
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.37
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.89
urinary bladder, adult.CNhs10481.879-12E481.72
uterus, adult pregnant day19.CNhs10497.590-15F519.14
uterus, adult.CNhs10509.92-27E531.50
vagina, adult.CNhs10502.89-27D527.01
vesicular gland, adult.CNhs10491.51-27F846.65
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1121.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A293.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3122.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7136.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A487.01
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A581.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6103.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7115.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8101.96
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9100.96
whole body, embryo E11.CNhs11014.324-5I822.63
whole body, embryo E12.CNhs10587.857-27C932.72
whole body, embryo E13.CNhs10512.372-23H220.49
whole body, embryo E14.5.CNhs10578.420-27D243.52
whole body, embryo E14.CNhs10519.395-14B131.23
whole body, embryo E16.CNhs10514.453-14F235.67
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.93
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G537.26
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.78
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G527.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.41
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.87
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G527.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G525.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G521.66
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G523.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.00
whole body, embryo E17.5.CNhs10513.490-9F926.04
whole body, embryo E17.CNhs10517.475-3I543.72
whole body, embryo E18.CNhs10516.493-3B325.73
whole body, neonate N00.CNhs10525.657-19C237.60
whole body, neonate N01.CNhs10576.659-23C646.48
whole body, neonate N06.CNhs10515.692-21D136.84
whole body, neonate N10.CNhs10518.761-6B432.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:143868129..143868172,-&oldid=880802"