Personal tools

FFCP PHASE1:Mm9::chr7:134119852..134119914,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:134119852..134119914,+
|short_description=p2@Cdipt
|description=CAGE_peak_2_at_Cdipt_5end
|association_with_transcript=0bp_to_ENSMUST00000032920,NM_026638,NM_138754,uc009jtv.1,uc012fty.1,uc012ftz.1_5end
|EntrezGene=52858
|EntrezGene=52858
|HGNC=
|HGNC=
|UniProt=Q8VDP6
|UniProt=Q8VDP6
|association_with_transcript=0bp_to_ENSMUST00000032920,NM_026638,NM_138754,uc009jtv.1,uc012fty.1,uc012ftz.1_5end
|description=CAGE_peak_2_at_Cdipt_5end
|id=chr7:134119852..134119914,+
|ontology_enrichment_disease=
|phase1_expression=13.6126520039075,28.2670080187882,28.6649520815408,21.1724947914781,18.0322462780685,17.7952028226603,17.7545606852599,34.2176807120177,8.16574588479667,7.72412936862578,34.0723756768755,35.1795221169434,34.4113467161724,41.5246911490238,14.3237197580735,15.9955461237963,17.4890469532037,24.7637799806217,17.824876368746,13.1560792057389,17.9441342218757,18.5674078745655,15.6719873483361,34.8783481689627,42.2113077163593,29.860062133981,27.9995297503399,31.4587999721398,39.7148946663821,30.9997059604715,38.8028393646783,11.4305521222734,22.7573971406291,15.8481681015439,9.53210345179206,14.4624141461888,8.5751129630195,39.7605049200062,28.9094077473806,26.1761871986899,37.6468152339849,30.7370468231301,44.6669524788661,16.1147927008739,13.2803779897564,16.702754446713,41.4667412504461,25.2909181401318,28.1198313900124,25.8591765768797,15.2585199571645,28.7505128729943,12.9192606664457,11.6057942721815,14.452033363126,28.0412785279182,16.3324060765091,21.6582278756526,22.2548106945558,20.6306481916093,16.4796164911607,21.6860500524245,23.1216646988896,39.5955875603816,48.4544517657817,42.628806896766,38.3488141463558,46.1061966385865,15.1386833970377,17.010748229793,18.718921560273,22.2807767834967,22.7494597180162,15.3113499018693,17.2521847832825,17.4651569455904,15.4162233399144,19.5361627270337,14.7462271925994,18.7278528576875,20.9506703849518,17.7110545989298,21.217907924105,18.5711661310454,20.4749652020926,17.3830865429464,15.6608848879013,13.047961207771,36.197120413262,23.5027551932103,11.0148505706638,11.185510400758,16.9992833426938,25.9057531986152,15.5946340187441,18.8171292580881,20.7857741794993,21.8150812899914,19.743736349818,21.9070536196411,17.7462708918617,6.41632387071589,0,0,24.0305055522448,23.055747758234,26.7927955857835,19.1828917928021,15.5362730188303,17.2192881315197,18.2159593104443,14.0054120023585,17.9880087859726,12.6607018064203,14.2282335634203,14.2003248202533,18.539622580078,10.1219549843938,11.4999371753484,8.57364304721269,14.7963817368464,9.69750506270444,33.550517019262,21.6657789788545,33.7209197969663,29.8884754594052,12.8202183221335,7.7987355029143,13.4694440697449,18.2744580073884,19.6725259212009,15.0785222535437,31.8098505951866,30.174423964979,16.4152555202052,20.9291229357407,8.55450656342657,12.9383249434497,19.7123751578266,22.5172785798527,13.5325260681212,13.3343220571414,11.884100567153,15.6733010549144,12.5867523429957,14.3487366719032,16.2103983488331,16.298312356558,11.8562396113063,7.18603104637713,7.9178005873777,10.9597866213787,8.61946472599353,13.5818344943645,10.906453229621,10.1507476077432,7.02213187313235,7.72043721344146,15.0606654679664,11.3919174894526,10.5536726991493,11.523971933505,9.2330446878232,11.6090896730968,9.87309522479221,10.4640275137684,8.85302224618743,8.4071046504362,9.54447129498187,10.9992200932994,10.8632204791447,12.2807989437279,10.9775057645525,12.4811969447146,23.9730541363105,13.5834088340655,50.8844925795049,23.5361004330554,9.59797127408553,9.52170354627798,9.14958975386863,12.1010114774006,11.7860363237781,22.0661726290569,25.6245693234036,23.5519505255336,24.3795152536261,19.2987777879916,19.8863368861503,25.1669434423182,22.0460810872188,19.515844778928,13.2767530667157,9.48262654660749,9.01661885384643,11.2008230314923,10.0855293327165,9.95928642442524,13.4061458703425,16.679946721695,16.7988638790271,15.5480426541469,17.7871576252289,16.017130148745,16.9040735797355,15.0657615297852,19.4745716532963,18.0882869814313,17.0599320693551,14.3848068725405,12.6465476884528,12.0807021802756,2.87536413054709,12.6527922207291,12.4815069245824,12.3763650194085,14.7105879087968,16.8855232477179,16.0735275444946,8.52711352967181,9.94086356296358,8.48725428875941,11.0304416695596,12.5629693081362,13.5684875305028,10.1469496886055,11.1920952315396,14.6166695168191,10.6834695000516,14.0922450655535,17.2684981865896,15.0435020924772,18.0949540727127,31.5465296614852,24.0964493779328,17.1080782708934,17.1789131286937,15.9407893765396,7.86887737808042,13.1284882146274,13.2513452154828,14.4462335389756,17.0184484208911,10.7535959078648,12.4767257486141,8.20921939287614,13.3587531552715,14.6127928955656,11.0680577825027,20.8858855674175,14.7617688616599,12.8207234640424,8.95878276444668,16.1670720513085,19.9117707509944,12.867373716214,10.5813244937663,13.5795657424247,21.8523400731772,19.6758494684114,20.4158351602895,10.9060118843252,16.3988794056972,19.2782422340848,39.0048851727495,36.0974401368654,10.5536277783674,14.2248264284735,16.1698354728443,14.1462443120851,9.75371285032505,12.8425548673491,14.6448628335888,17.9634319977614,23.2324990983073,18.4293901651524,18.3038570385618,12.5313552235525,8.07322133479528,12.364149610272,13.6084472163576,16.5782308742512,22.1525435838687,17.0591277849669,17.0870880797853,12.3832120777933,12.222838806401,18.0833718724503,17.3601669205702,13.4979122191848,8.32894306969891,11.47601909054,11.1941978781583,23.8667654503778,10.2809197913869,8.3360981522008,9.50446999231851,12.7543860568826,13.3201163885168,13.0818415993276,12.3153649030751,21.4639872426904,22.9418502726473,24.2322332103901,2.25477175473676,9.71857549285862,9.10021697514037,10.8892665472667,14.4659002295059,9.63049915297436,7.74557775061976,9.24451132392046,10.6956531314225,3.62376181239009,3.16833006883652,20.2247117202034,14.5962155008918,13.0442915599331,13.3818447667129,17.3655894797457,14.7024202538136,14.9042357404761,20.5288442772662,15.6497997419629,16.232049817515,17.2412776583997,18.2246236983337,19.8196393779079,20.336580979593,14.5107445513735,13.9851150625661,13.4570784914214,12.2555769945777,11.204996453867,19.7066599223741,16.3004945597866,21.2224695288275,26.5833215138743,22.0253218620656,30.3814656094737,27.498984645091,40.0417914860792,28.0883833105963,24.9279986138601,31.0510350106631,22.9663813644352,28.5479717660049,35.7254615108756,6.33102820263478,15.9609949360412,13.1464876430683,12.6415492875513,5.65955539095552,4.41224420280034,10.8900896622791,8.85950746127245,7.70206103020357,10.1078884705519,10.8996098952803,12.6379648728671,10.0196412992774,11.8446531949008,12.4060612944125,11.9073422820768,10.1978206831473,11.9603716687497,14.0109206273124,10.1567254892734,10.2860775715625,11.8908790126756,10.4911923576821,10.61028841416,10.540250606517,11.0845136338096,11.7073902638574,8.94437018888666,11.2717414492065,10.1005608898393,10.202611558679,8.86540341380071,8.59385190656348,9.14127362997199,11.9602098808308,19.9848462350357,13.8019648982791,10.7435527024149,13.1988949127502,9.70602244125868,14.6076736440866
|phase1_expression=13.6126520039075,28.2670080187882,28.6649520815408,21.1724947914781,18.0322462780685,17.7952028226603,17.7545606852599,34.2176807120177,8.16574588479667,7.72412936862578,34.0723756768755,35.1795221169434,34.4113467161724,41.5246911490238,14.3237197580735,15.9955461237963,17.4890469532037,24.7637799806217,17.824876368746,13.1560792057389,17.9441342218757,18.5674078745655,15.6719873483361,34.8783481689627,42.2113077163593,29.860062133981,27.9995297503399,31.4587999721398,39.7148946663821,30.9997059604715,38.8028393646783,11.4305521222734,22.7573971406291,15.8481681015439,9.53210345179206,14.4624141461888,8.5751129630195,39.7605049200062,28.9094077473806,26.1761871986899,37.6468152339849,30.7370468231301,44.6669524788661,16.1147927008739,13.2803779897564,16.702754446713,41.4667412504461,25.2909181401318,28.1198313900124,25.8591765768797,15.2585199571645,28.7505128729943,12.9192606664457,11.6057942721815,14.452033363126,28.0412785279182,16.3324060765091,21.6582278756526,22.2548106945558,20.6306481916093,16.4796164911607,21.6860500524245,23.1216646988896,39.5955875603816,48.4544517657817,42.628806896766,38.3488141463558,46.1061966385865,15.1386833970377,17.010748229793,18.718921560273,22.2807767834967,22.7494597180162,15.3113499018693,17.2521847832825,17.4651569455904,15.4162233399144,19.5361627270337,14.7462271925994,18.7278528576875,20.9506703849518,17.7110545989298,21.217907924105,18.5711661310454,20.4749652020926,17.3830865429464,15.6608848879013,13.047961207771,36.197120413262,23.5027551932103,11.0148505706638,11.185510400758,16.9992833426938,25.9057531986152,15.5946340187441,18.8171292580881,20.7857741794993,21.8150812899914,19.743736349818,21.9070536196411,17.7462708918617,6.41632387071589,0,0,24.0305055522448,23.055747758234,26.7927955857835,19.1828917928021,15.5362730188303,17.2192881315197,18.2159593104443,14.0054120023585,17.9880087859726,12.6607018064203,14.2282335634203,14.2003248202533,18.539622580078,10.1219549843938,11.4999371753484,8.57364304721269,14.7963817368464,9.69750506270444,33.550517019262,21.6657789788545,33.7209197969663,29.8884754594052,12.8202183221335,7.7987355029143,13.4694440697449,18.2744580073884,19.6725259212009,15.0785222535437,31.8098505951866,30.174423964979,16.4152555202052,20.9291229357407,8.55450656342657,12.9383249434497,19.7123751578266,22.5172785798527,13.5325260681212,13.3343220571414,11.884100567153,15.6733010549144,12.5867523429957,14.3487366719032,16.2103983488331,16.298312356558,11.8562396113063,7.18603104637713,7.9178005873777,10.9597866213787,8.61946472599353,13.5818344943645,10.906453229621,10.1507476077432,7.02213187313235,7.72043721344146,15.0606654679664,11.3919174894526,10.5536726991493,11.523971933505,9.2330446878232,11.6090896730968,9.87309522479221,10.4640275137684,8.85302224618743,8.4071046504362,9.54447129498187,10.9992200932994,10.8632204791447,12.2807989437279,10.9775057645525,12.4811969447146,23.9730541363105,13.5834088340655,50.8844925795049,23.5361004330554,9.59797127408553,9.52170354627798,9.14958975386863,12.1010114774006,11.7860363237781,22.0661726290569,25.6245693234036,23.5519505255336,24.3795152536261,19.2987777879916,19.8863368861503,25.1669434423182,22.0460810872188,19.515844778928,13.2767530667157,9.48262654660749,9.01661885384643,11.2008230314923,10.0855293327165,9.95928642442524,13.4061458703425,16.679946721695,16.7988638790271,15.5480426541469,17.7871576252289,16.017130148745,16.9040735797355,15.0657615297852,19.4745716532963,18.0882869814313,17.0599320693551,14.3848068725405,12.6465476884528,12.0807021802756,2.87536413054709,12.6527922207291,12.4815069245824,12.3763650194085,14.7105879087968,16.8855232477179,16.0735275444946,8.52711352967181,9.94086356296358,8.48725428875941,11.0304416695596,12.5629693081362,13.5684875305028,10.1469496886055,11.1920952315396,14.6166695168191,10.6834695000516,14.0922450655535,17.2684981865896,15.0435020924772,18.0949540727127,31.5465296614852,24.0964493779328,17.1080782708934,17.1789131286937,15.9407893765396,7.86887737808042,13.1284882146274,13.2513452154828,14.4462335389756,17.0184484208911,10.7535959078648,12.4767257486141,8.20921939287614,13.3587531552715,14.6127928955656,11.0680577825027,20.8858855674175,14.7617688616599,12.8207234640424,8.95878276444668,16.1670720513085,19.9117707509944,12.867373716214,10.5813244937663,13.5795657424247,21.8523400731772,19.6758494684114,20.4158351602895,10.9060118843252,16.3988794056972,19.2782422340848,39.0048851727495,36.0974401368654,10.5536277783674,14.2248264284735,16.1698354728443,14.1462443120851,9.75371285032505,12.8425548673491,14.6448628335888,17.9634319977614,23.2324990983073,18.4293901651524,18.3038570385618,12.5313552235525,8.07322133479528,12.364149610272,13.6084472163576,16.5782308742512,22.1525435838687,17.0591277849669,17.0870880797853,12.3832120777933,12.222838806401,18.0833718724503,17.3601669205702,13.4979122191848,8.32894306969891,11.47601909054,11.1941978781583,23.8667654503778,10.2809197913869,8.3360981522008,9.50446999231851,12.7543860568826,13.3201163885168,13.0818415993276,12.3153649030751,21.4639872426904,22.9418502726473,24.2322332103901,2.25477175473676,9.71857549285862,9.10021697514037,10.8892665472667,14.4659002295059,9.63049915297436,7.74557775061976,9.24451132392046,10.6956531314225,3.62376181239009,3.16833006883652,20.2247117202034,14.5962155008918,13.0442915599331,13.3818447667129,17.3655894797457,14.7024202538136,14.9042357404761,20.5288442772662,15.6497997419629,16.232049817515,17.2412776583997,18.2246236983337,19.8196393779079,20.336580979593,14.5107445513735,13.9851150625661,13.4570784914214,12.2555769945777,11.204996453867,19.7066599223741,16.3004945597866,21.2224695288275,26.5833215138743,22.0253218620656,30.3814656094737,27.498984645091,40.0417914860792,28.0883833105963,24.9279986138601,31.0510350106631,22.9663813644352,28.5479717660049,35.7254615108756,6.33102820263478,15.9609949360412,13.1464876430683,12.6415492875513,5.65955539095552,4.41224420280034,10.8900896622791,8.85950746127245,7.70206103020357,10.1078884705519,10.8996098952803,12.6379648728671,10.0196412992774,11.8446531949008,12.4060612944125,11.9073422820768,10.1978206831473,11.9603716687497,14.0109206273124,10.1567254892734,10.2860775715625,11.8908790126756,10.4911923576821,10.61028841416,10.540250606517,11.0845136338096,11.7073902638574,8.94437018888666,11.2717414492065,10.1005608898393,10.202611558679,8.86540341380071,8.59385190656348,9.14127362997199,11.9602098808308,19.9848462350357,13.8019648982791,10.7435527024149,13.1988949127502,9.70602244125868,14.6076736440866
|short_description=p2@Cdipt
}}
}}

Revision as of 21:46, 18 April 2012

Short description:p2@Cdipt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cdipt_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000032920, NM_026638, NM_138754, uc009jtv.1, uc012fty.1, uc012ftz.1_5end
EntrezGene:Cdipt
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cdipt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I528.27
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I628.66
CD326+ enterocyte, pool1.CNhs13542.11848-124I321.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.80
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E934.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E634.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F135.18
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E434.41
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E841.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A517.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A224.76
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A417.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A613.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.67
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D134.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D242.21
GP2+ M cell, pool1.CNhs13228.11845-124H929.86
GP2+ M cell, pool2.CNhs13231.11846-124I128.00
GP2+ M cell, pool3.CNhs13240.11847-124I231.46
Ileum epithelium, pool1.CNhs13199.10252-104B939.71
Ileum epithelium, pool2.CNhs13232.10253-104C131.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C838.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G839.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H326.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G937.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H444.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.28
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.70
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B741.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.29
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B828.12
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C415.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C428.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.92
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.45
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C128.04
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C521.66
Mouse Granule cells, donor1.CNhs12131.11713-123C322.25
Mouse Granule cells, donor2.CNhs12357.11731-123E320.63
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D123.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C739.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E748.45
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D242.63
Mouse Microglia, donor1.CNhs12629.11718-123C838.35
Mouse Microglia, donor2.CNhs12634.11736-123E846.11
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.01
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.54
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.05
Mouse Schwann, donor1.CNhs12507.11728-123D936.20
Mouse Schwann, donor2.CNhs12573.11746-123F923.50
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C825.91
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F618.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I721.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E319.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.91
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G223.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G326.79
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.18
accessory axillary lymph node, adult.CNhs10475.1063-29H915.54
adrenal gland, adult.CNhs10508.49-24D717.22
adrenal gland, embryo E14.CNhs11038.406-44C518.22
adrenal gland, embryo E16.CNhs11004.1254-43D614.01
adrenal gland, embryo E17.CNhs11043.1263-45I117.99
adrenal gland, embryo E18.CNhs11026.1262-18F512.66
adrenal gland, neonate N00.CNhs11191.1311-23C114.23
adrenal gland, neonate N25.CNhs11223.1377-27I314.20
amnion, adult pregnant day17.5.CNhs10488.583-22A818.54
aorta, adult.CNhs10498.46-23H110.12
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F58.57
bone (os femoris), neonate N16.CNhs11225.1525-43A614.80
bone (os femoris), neonate N20.CNhs11195.1350-25C39.70
cecum, adult.CNhs10467.37-13H433.55
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I233.72
colon, adult.CNhs10468.36-18H729.89
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.82
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.47
corpora quadrigemina, adult.CNhs10501.16-22A418.27
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F115.08
cortex, adult.CNhs10473.12-14D531.81
cortex, neonate N30.CNhs11107.1392-42F230.17
diencephalon, adult.CNhs10482.20-12F216.42
diencephalon, neonate N30.CNhs11201.1388-42B220.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.94
epididymis, adult.CNhs10490.58-23B219.71
eyeball, adult.CNhs10484.31-12G422.52
eyeball, embryo E12.CNhs11016.345-16C613.53
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C911.88
eyeball, embryo E17.CNhs11023.1261-18D415.67
eyeball, neonate N00.CNhs11207.633-15C612.59
eyeball, neonate N01.CNhs11140.1532-43E714.35
eyeball, neonate N02.CNhs11205.1551-44G816.21
eyeball, neonate N16.CNhs11188.777-19A216.30
forelimb, embryo E11.CNhs10596.335-25E211.86
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A810.96
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B510.91
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.72
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.06
heart, embryo E11.CNhs10586.331-24E911.39
heart, embryo E12.CNhs11015.353-12F510.55
heart, embryo E13.CNhs11013.376-3I911.52
heart, embryo E14.CNhs10597.403-26D49.23
heart, embryo E15.CNhs11017.431-16C811.61
heart, embryo E16.CNhs11021.457-17C69.87
heart, embryo E17.CNhs11025.479-18E510.46
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E38.41
heart, neonate N03.CNhs11221.1349-25I29.54
heart, neonate N10.CNhs11118.749-24G111.00
heart, neonate N16.CNhs11209.782-15G110.86
heart, neonate N20.CNhs11127.821-26I612.28
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D212.48
hippocampus, adult.CNhs10478.13-16E823.97
hippocampus, neonate N00.CNhs11228.627-43G113.58
intestinal mucosa, adult.CNhs10506.860-29I350.88
intestine, adult.CNhs10496.178-9A323.54
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D59.52
intestine, embryo E15.CNhs10602.976-16D89.15
intestine, embryo E16.CNhs10585.463-22H412.10
intestine, embryo E17.CNhs10582.482-18D311.79
intestine, embryo E18.CNhs10526.1289-20F722.07
intestine, neonate N00.CNhs11126.644-26D125.62
intestine, neonate N01.CNhs11192.1322-23E923.55
intestine, neonate N06.CNhs11102.688-20B824.38
intestine, neonate N07.CNhs11095.720-20F219.30
intestine, neonate N10.CNhs11098.755-23A519.89
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E322.05
intestine, neonate N30.CNhs11131.1384-42G119.52
kidney, embryo E14.CNhs10606.411-4I913.28
kidney, embryo E15.CNhs10997.434-16F89.48
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I211.20
kidney, embryo E18.CNhs11001.1288-20C710.09
kidney, neonate N00.CNhs11214.646-21G79.96
kidney, neonate N10.CNhs11206.758-6D513.41
kidney, neonate N20.CNhs11113.832-19I116.68
kidney, neonate N25.CNhs11122.1353-25F316.80
kidney, neonate N30.CNhs11203.1385-42H115.55
liver, adult pregnant day01.CNhs10466.508-5B217.79
liver, embryo E12.CNhs10601.355-15F816.02
liver, embryo E13.CNhs10524.378-3H616.90
liver, embryo E14.CNhs10594.409-16E115.07
liver, embryo E15.CNhs10520.433-16D719.47
liver, embryo E16.CNhs10523.462-17F518.09
liver, embryo E17.CNhs10510.481-18A317.06
liver, embryo E18.CNhs10579.499-43G414.38
liver, neonate N00.CNhs11117.641-24F412.65
liver, neonate N03.CNhs11123.1345-25G212.08
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B912.48
liver, neonate N20.CNhs11220.823-25A312.38
liver, neonate N25.CNhs11198.1368-26H114.71
liver, neonate N30.CNhs11106.1382-42D116.89
lung, adult.CNhs10474.28-22B116.07
lung, embryo E12.CNhs10522.354-16G28.53
lung, embryo E14.CNhs10604.404-26F89.94
lung, embryo E15.CNhs11020.432-17C58.49
lung, embryo E16.CNhs10998.458-17B611.03
lung, embryo E17.CNhs10605.480-44A612.56
lung, embryo E18.CNhs10583.1287-20I613.57
lung, neonate N00.CNhs11224.640-42C610.15
lung, neonate N06.CNhs11212.683-20E511.19
lung, neonate N07.CNhs11111.715-19A314.62
lung, neonate N10.CNhs11219.750-23E610.68
lung, neonate N20.CNhs11109.822-18A414.09
lung, neonate N25.CNhs11119.1359-25C717.27
lung, neonate N30.CNhs11133.1394-42H215.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A131.55
mammary gland, adult lactating day02.CNhs10480.595-22B624.10
mammary gland, adult pregnant day19.CNhs10476.588-5H217.11
medulla oblongata, adult.CNhs10477.17-12C217.18
medulla oblongata, neonate N30.CNhs11200.1396-42A315.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.13
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.45
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.07
olfactory brain, adult.CNhs10489.18-22I920.89
ovary, adult.CNhs10507.91-2I714.76
ovary, embryo E18.CNhs11040.505-44H712.82
ovary, neonate N00.CNhs11217.1299-22I48.96
oviduct, adult pregnant day01.CNhs10500.988-6G616.17
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F412.87
pancreas, embryo E15.CNhs11042.1556-45F210.58
pancreas, embryo E16.CNhs11003.460-26E513.58
pancreas, embryo E17.CNhs10599.1558-45G321.85
pancreas, embryo E18.CNhs10580.1535-43I719.68
pancreas, neonate N00.CNhs11105.645-26G920.42
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B619.28
pancreas, neonate N25.CNhs11094.1555-45E239.00
pancreas, neonate N30.CNhs11182.1548-44H536.10
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E614.22
pituitary gland, embryo E13.CNhs11009.370-44C716.17
pituitary gland, embryo E14.CNhs11037.398-44A514.15
pituitary gland, embryo E15.CNhs10592.427-16B99.75
pituitary gland, embryo E16.CNhs11036.449-43F612.84
pituitary gland, embryo E17.CNhs11039.1265-44F514.64
pituitary gland, neonate N00.CNhs11190.1308-22E917.96
placenta, adult pregnant day10.CNhs10472.539-13I723.23
placenta, adult pregnant day17.CNhs10464.577-18G318.43
prostate, adult.CNhs10470.859-1F818.30
skin, adult.CNhs10492.30-1C312.53
skin, neonate N00.CNhs11124.650-25G48.07
skin, neonate N03.CNhs11215.662-22H312.36
skin, neonate N06.CNhs11097.693-20I513.61
skin, neonate N10.CNhs11108.762-6C416.58
small intestine, neonate N16.CNhs11114.790-21I122.15
spinal cord, adult.CNhs10505.24-13C917.06
spleen, adult.CNhs10465.25-2G217.09
spleen, embryo E16.CNhs11035.461-43C112.38
spleen, embryo E18.CNhs11011.1271-21F212.22
spleen, neonate N10.CNhs11116.752-24D118.08
spleen, neonate N20.CNhs11112.824-19H117.36
spleen, neonate N25.CNhs11099.1354-25G313.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.19
stomach, adult.CNhs10503.33-1H623.87
stomach, embryo E12.CNhs10588.356-43E310.28
stomach, embryo E15.CNhs10603.1252-16G88.34
stomach, embryo E16.CNhs11022.459-17D49.50
stomach, embryo E17.CNhs11006.1035-18D512.75
stomach, embryo E18.CNhs10999.1286-20C613.32
stomach, neonate N03.CNhs11193.1340-24B813.08
stomach, neonate N07.CNhs11210.718-18A912.32
stomach, neonate N25.CNhs11104.1355-25E421.46
stomach, neonate N30.CNhs11134.1386-42I122.94
submandibular gland, adult.CNhs10469.59-29C124.23
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F59.72
testis, embryo E15.CNhs11034.443-27C59.10
testis, embryo E16.CNhs11033.470-26G510.89
testis, embryo E17.CNhs11029.486-18I514.47
testis, embryo E18.CNhs11027.503-18G59.63
testis, neonate N00.CNhs11189.1300-22B77.75
testis, neonate N07.CNhs11222.726-26I49.24
testis, neonate N10.CNhs11204.763-44D910.70
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B520.22
thymus, embryo E14.CNhs11041.402-44I414.60
thymus, embryo E15.CNhs11005.430-45I213.04
thymus, embryo E16.CNhs11002.456-26C513.38
thymus, embryo E17.CNhs10581.478-18C117.37
thymus, embryo E18.CNhs10595.1273-19G414.70
thymus, neonate N02.CNhs11181.1541-43F814.90
thymus, neonate N03.CNhs11137.2104-43C720.53
thymus, neonate N06.CNhs11197.681-26C415.65
thymus, neonate N07.CNhs11211.713-19D316.23
thymus, neonate N10.CNhs11194.748-24E417.24
thymus, neonate N20.CNhs11186.820-7A218.22
thymus, neonate N25.CNhs11125.1362-25G719.82
thymus, neonate N30.CNhs11132.1393-42G220.34
tongue, adult.CNhs10499.32-1B414.51
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.46
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.26
urinary bladder, adult.CNhs10481.879-12E411.20
uterus, adult pregnant day19.CNhs10497.590-15F519.71
uterus, adult.CNhs10509.92-27E516.30
vagina, adult.CNhs10502.89-27D521.22
vesicular gland, adult.CNhs10491.51-27F826.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A230.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A327.50
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D740.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.09
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A935.73
whole body, embryo E11.CNhs11014.324-5I86.33
whole body, embryo E12.CNhs10587.857-27C915.96
whole body, embryo E13.CNhs10512.372-23H213.15
whole body, embryo E14.5.CNhs10578.420-27D212.64
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.16
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.14
whole body, embryo E17.5.CNhs10513.490-9F911.96
whole body, embryo E17.CNhs10517.475-3I519.98
whole body, embryo E18.CNhs10516.493-3B313.80
whole body, neonate N00.CNhs10525.657-19C210.74
whole body, neonate N01.CNhs10576.659-23C613.20
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B414.61





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:134119852..134119914,%2B&oldid=961106"