DOID:423: Difference between revisions
From FANTOM5_SSTAR
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|id=DOID:423
|name=myopathy
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|def="A muscular disease in which the muscle fibers do not function resulting in muscular weakness." [url:http\://en.wikiped...") |
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|id=DOID:423 | |id=DOID:423 | ||
|name=myopathy | |name=myopathy | ||
|namespace= | |namespace=disease_ontology | ||
|def="A muscular disease in which the muscle fibers do not function resulting in muscular weakness." [url:http\://en.wikipedia.org/wiki/Myopathy] | |def="A muscular disease in which the muscle fibers do not function resulting in muscular weakness." [url:http\://en.wikipedia.org/wiki/Myopathy] | ||
|xref= | |xref=ICD9CM:359.9;;MSH:D009135;;SNOMEDCT_2010_1_31:129565002;;SNOMEDCT_2010_1_31:155094005;;SNOMEDCT_2010_1_31:155099000;;SNOMEDCT_2010_1_31:203833006;;SNOMEDCT_2010_1_31:203845002;;SNOMEDCT_2010_1_31:267711006;;SNOMEDCT_2010_1_31:267714003;;SNOMEDCT_2010_1_31:268103006;;SNOMEDCT_2010_1_31:52794005;;SNOMEDCT_2010_1_31:75047002;;UMLS_CUI:C0026848 | ||
|is_a=DOID:66 | |is_a=DOID:66 | ||
|synonym= | |synonym= | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
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}} | }} | ||
Revision as of 14:00, 11 June 2012
| Name: | myopathy | ||
|---|---|---|---|
| Namespace: | disease_ontology | ||
| Definition: | "A muscular disease in which the muscle fibers do not function resulting in muscular weakness." [url:http\://en.wikipedia.org/wiki/Myopathy] | ||
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:66(muscle tissue disease) |
|---|
Children
| is a: | DOID:450 (myotonic disease) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 11556-120C8 (Fibroblast - skin dystrophia myotonica, donor1)
- 11557-120C9 (Fibroblast - skin dystrophia myotonica, donor2)
- 11560-120D3 (Fibroblast - skin dystrophia myotonica, donor3)
- 14306-155C4
- 14307-155C5
- 14308-155C6 (Fibroblast - skin dystrophia myotonica, donor3 (nuclear fraction))
- 14327-155E7
- 14328-155E8
- 14329-155E9 (Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction))
Mouse (Mus musculus)
- 11556-120C8 (Fibroblast - skin dystrophia myotonica, donor1)
- 11557-120C9 (Fibroblast - skin dystrophia myotonica, donor2)
- 11560-120D3 (Fibroblast - skin dystrophia myotonica, donor3)
- 14306-155C4
- 14307-155C5
- 14308-155C6 (Fibroblast - skin dystrophia myotonica, donor3 (nuclear fraction))
- 14327-155E7
- 14328-155E8
- 14329-155E9 (Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:423 (myopathy), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.5e-156 | FFCP PHASE1:Hg19::chr15:33180439..33180446,-#_d545d920a9e2d9a23e9b35fc8c5bde48 | p@chr15:33180439..33180446, - |
| 1.5e-156 | FFCP PHASE2:Hg19::chr15:33180439..33180446,-#_d545d920a9e2d9a23e9b35fc8c5bde48 | p@chr15:33180439..33180446, - |
| 6.23e-66 | FFCP PHASE1:Hg19::chr13:24044226..24044237,+#_9765dcd629182c684e28a638a82c0898 | p1@LINC00327 |
| 6.23e-66 | FFCP PHASE2:Hg19::chr13:24044226..24044237,+#_9765dcd629182c684e28a638a82c0898 | p1@LINC00327 |
| 3.99e-52 | FFCP PHASE2:Hg19::chr4:184271970..184271992,-#_cf171b2eea85d9d02e07231ab5ecbb55 | p@chr4:184271970..184271992, - |
| 3.99e-52 | FFCP PHASE1:Hg19::chr4:184271970..184271992,-#_cf171b2eea85d9d02e07231ab5ecbb55 | p@chr4:184271970..184271992, - |
| 3.24e-51 | FFCP PHASE1:Hg19::chr15:33180622..33180633,-#_a92e979a5b29c2ce8fa9704b4802028b | p13@FMN1 |
| 3.24e-51 | FFCP PHASE2:Hg19::chr15:33180622..33180633,-#_a92e979a5b29c2ce8fa9704b4802028b | p13@FMN1 |
| 8.65e-49 | FFCP PHASE1:Hg19::chr13:24044200..24044211,+#_0b934cd73dfb72645969f5adcf722534 | p2@LINC00327 |
| 8.65e-49 | FFCP PHASE2:Hg19::chr13:24044200..24044211,+#_0b934cd73dfb72645969f5adcf722534 | p2@LINC00327 |
| 8.65e-49 | FFCP PHASE2:Hg19::chr1:198636401..198636419,-#_0b934cd73dfb72645969f5adcf722534 | p3@ENST00000413577 |
| 8.65e-49 | FFCP PHASE1:Hg19::chr1:198636401..198636419,-#_0b934cd73dfb72645969f5adcf722534 | p3@ENST00000413577 |
| 8.92e-46 | FFCP PHASE2:Hg19::chr1:197886646..197886657,+#_3a77146a749d98bdd52a2536421dede6 | p5@LHX9 |
| 8.92e-46 | FFCP PHASE1:Hg19::chr1:197886646..197886657,+#_3a77146a749d98bdd52a2536421dede6 | p5@LHX9 |
| 3.84e-42 | FFCP PHASE1:Hg19::chr22:48819856..48819861,+#_9e9b530e4bda0a1968ff5ff4d9bb9a03 | p@chr22:48819856..48819861, + |
| 3.84e-42 | FFCP PHASE2:Hg19::chr22:48819856..48819861,+#_9e9b530e4bda0a1968ff5ff4d9bb9a03 | p@chr22:48819856..48819861, + |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:55505693..55505698,+#_d805b7d60280f663f61f573ed4c25ec5 | p7@PCSK9 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:55505693..55505698,+#_d805b7d60280f663f61f573ed4c25ec5 | p7@PCSK9 |
| 2.71e-40 | FFCP PHASE2:Hg19::chr2:100323985..100323997,-#_8298953c1df69e7b0acac28d24e5c682 | p@chr2:100323985..100323997, - |
| 2.71e-40 | FFCP PHASE1:Hg19::chr2:100323985..100323997,-#_8298953c1df69e7b0acac28d24e5c682 | p@chr2:100323985..100323997, - |
| 5.85e-40 | FFCP PHASE1:Hg19::chr15:39571769..39571781,-#_5d15eaf6cab31f7e59576253d77d527e | p@chr15:39571769..39571781, - |
| 5.85e-40 | FFCP PHASE2:Hg19::chr15:39571769..39571781,-#_5d15eaf6cab31f7e59576253d77d527e | p@chr15:39571769..39571781, - |
| 2.05e-39 | FFCP PHASE1:Hg19::chr15:33180498..33180522,-#_5a517b7bc90ec98d0a74c76bcb0f0c43 | p4@FMN1 |
| 2.05e-39 | FFCP PHASE2:Hg19::chr15:33180498..33180522,-#_5a517b7bc90ec98d0a74c76bcb0f0c43 | p4@FMN1 |
| 7.88e-38 | FFCP PHASE1:Hg19::chrX:3102846..3102872,+#_14b8e8fa5c116a09c0e547c69a626290 | p@chrX:3102846..3102872, + |
| 7.88e-38 | FFCP PHASE2:Hg19::chrX:3102846..3102872,+#_14b8e8fa5c116a09c0e547c69a626290 | p@chrX:3102846..3102872, + |
| 8.51e-37 | FFCP PHASE2:Hg19::chr1:198636258..198636278,-#_4bb3cdc53e2aa6fdb49725aa9d7d1943 | p1@ENST00000413577 |
| 8.51e-37 | FFCP PHASE1:Hg19::chr1:198636258..198636278,-#_4bb3cdc53e2aa6fdb49725aa9d7d1943 | p1@ENST00000413577 |
| 2.0e-36 | FFCP PHASE1:Hg19::chr2:100323966..100323983,-#_3c27dd87a7547e42751c9fb593c36068 | p@chr2:100323966..100323983, - |
| 2.0e-36 | FFCP PHASE2:Hg19::chr2:100323966..100323983,-#_3c27dd87a7547e42751c9fb593c36068 | p@chr2:100323966..100323983, - |
| 1.82e-34 | FFCP PHASE2:Hg19::chr1:197886421..197886432,+#_8a8c2b9205f89fa28260833e549672ce | p2@LHX9 |
| 1.82e-34 | FFCP PHASE1:Hg19::chr1:197886421..197886432,+#_8a8c2b9205f89fa28260833e549672ce | p2@LHX9 |
| 3.86e-33 | FFCP PHASE2:Hg19::chr1:197889151..197889159,+#_e891a769f1300e48724a98945dcc3234 | p@chr1:197889151..197889159, + |
| 3.86e-33 | FFCP PHASE1:Hg19::chr1:197889151..197889159,+#_e891a769f1300e48724a98945dcc3234 | p@chr1:197889151..197889159, + |
| 4.23e-33 | FFCP PHASE2:Hg19::chr5:167181769..167181798,+#_5b63d0d5e5614576361508e0dad1e54a | p17@ODZ2 |
| 4.23e-33 | FFCP PHASE1:Hg19::chr5:167181769..167181798,+#_5b63d0d5e5614576361508e0dad1e54a | p17@ODZ2 |
| 4.31e-33 | FFCP PHASE2:Hg19::chr1:197886772..197886790,+#_77927e23d0b063ab059ad8dfd29f81d3 | p4@LHX9 |
| 4.31e-33 | FFCP PHASE1:Hg19::chr1:197886772..197886790,+#_77927e23d0b063ab059ad8dfd29f81d3 | p4@LHX9 |
| 6.67e-33 | FFCP PHASE2:Hg19::chr1:197886617..197886628,+#_5d4f31294fcff288d5dbaea77946a52b | p8@LHX9 |
| 6.67e-33 | FFCP PHASE1:Hg19::chr1:197886617..197886628,+#_5d4f31294fcff288d5dbaea77946a52b | p8@LHX9 |
| 9.31e-33 | FFCP PHASE1:Hg19::chr14:32963433..32963487,+#_a8977303495dc7e2154508b0ed626544 | p4@AKAP6 |
| 9.31e-33 | FFCP PHASE2:Hg19::chr14:32963433..32963487,+#_a8977303495dc7e2154508b0ed626544 | p4@AKAP6 |
| 9.4e-33 | FFCP PHASE2:Hg19::chr8:23564380..23564391,+#_c00bd29a2c576a5a0c91260fdf0acc59 | p1@ENST00000523874 |
| 9.4e-33 | FFCP PHASE1:Hg19::chr8:23564380..23564391,+#_c00bd29a2c576a5a0c91260fdf0acc59 | p1@ENST00000523874 |
| 1.7e-32 | FFCP PHASE1:Hg19::chr20:52570906..52570909,-#_e2a70bb07534fd479f6803178b7a7a67 | p@chr20:52570906..52570909, - |
| 1.7e-32 | FFCP PHASE2:Hg19::chr20:52570906..52570909,-#_e2a70bb07534fd479f6803178b7a7a67 | p@chr20:52570906..52570909, - |
| 1.23e-30 | FFCP PHASE2:Hg19::chr1:197886665..197886732,+#_868b6adae1428adaab43062467380324 | p3@LHX9 |
| 1.23e-30 | FFCP PHASE1:Hg19::chr1:197886665..197886732,+#_868b6adae1428adaab43062467380324 | p3@LHX9 |
| 1.42e-30 | FFCP PHASE1:Hg19::chr15:33180558..33180570,-#_7f91e8089dbb3748171d136e8d8533b8 | p9@FMN1 |
| 1.42e-30 | FFCP PHASE2:Hg19::chr15:33180558..33180570,-#_7f91e8089dbb3748171d136e8d8533b8 | p9@FMN1 |
| 6.36e-30 | FFCP PHASE2:Hg19::chr2:239778648..239778664,+#_96e8f8628675a222348dda40c2fc4972 | p@chr2:239778648..239778664, + |
| 6.36e-30 | FFCP PHASE1:Hg19::chr2:239778648..239778664,+#_96e8f8628675a222348dda40c2fc4972 | p@chr2:239778648..239778664, + |
| 7.23e-30 | FFCP PHASE1:Hg19::chr15:39880996..39881011,+#_eb6cc342c31c12b0b228a4f58af0c809 | p41@THBS1 |
| 7.23e-30 | FFCP PHASE2:Hg19::chr15:39880996..39881011,+#_eb6cc342c31c12b0b228a4f58af0c809 | p41@THBS1 |
| 3.13e-29 | FFCP PHASE2:Hg19::chr2:158114405..158114413,+#_66daf2f40a0b3d2ed8acf48a17466c5d | p11@GALNT5 |
| 3.13e-29 | FFCP PHASE1:Hg19::chr2:158114405..158114413,+#_66daf2f40a0b3d2ed8acf48a17466c5d | p11@GALNT5 |
| 6.34e-29 | FFCP PHASE2:Hg19::chr12:114845970..114846000,+#_4bd7f6824457450c082af58cc24a74aa | p1@LOC255480 |
| 6.34e-29 | FFCP PHASE1:Hg19::chr12:114845970..114846000,+#_4bd7f6824457450c082af58cc24a74aa | p1@LOC255480 |
| 2.45e-28 | FFCP PHASE2:Hg19::chr6:113697548..113697566,-#_f5260f23a415dc16dcf379b6d3282fd8 | p@chr6:113697548..113697566, - |
| 2.45e-28 | FFCP PHASE1:Hg19::chr6:113697548..113697566,-#_f5260f23a415dc16dcf379b6d3282fd8 | p@chr6:113697548..113697566, - |
| 6.02e-28 | FFCP PHASE1:Hg19::chr15:39593792..39593816,-#_4b27307e297fef12e16f5ec5ce1e7db2 | p@chr15:39593792..39593816, - |
| 6.02e-28 | FFCP PHASE2:Hg19::chr15:39593792..39593816,-#_4b27307e297fef12e16f5ec5ce1e7db2 | p@chr15:39593792..39593816, - |
| 2.04e-27 | FFCP PHASE1:Hg19::chr12:10084960..10084974,-#_5ac37be7351883954b08cf60eed72364 | p1@CLEC2A |
| 2.04e-27 | FFCP PHASE2:Hg19::chr12:10084960..10084974,-#_5ac37be7351883954b08cf60eed72364 | p1@CLEC2A |
| 2.08e-27 | FFCP PHASE1:Hg19::chr7:131195751..131195762,+#_b5b59e1e54c322ba56636adbcd825828 | p@chr7:131195751..131195762, + |
| 2.08e-27 | FFCP PHASE2:Hg19::chr7:131195751..131195762,+#_b5b59e1e54c322ba56636adbcd825828 | p@chr7:131195751..131195762, + |
| 2.72e-27 | FFCP PHASE2:Hg19::chr10:129815627..129815630,+#_6f860e221b673194ee8e69685cf45f3e | p@chr10:129815627..129815630, + |
| 2.72e-27 | FFCP PHASE1:Hg19::chr10:129815627..129815630,+#_6f860e221b673194ee8e69685cf45f3e | p@chr10:129815627..129815630, + |
| 3.55e-27 | FFCP PHASE1:Hg19::chr12:91539677..91539688,-#_5bbd6bfa93dc348311be18336a34ccfe | p@chr12:91539677..91539688, - |
| 3.55e-27 | FFCP PHASE2:Hg19::chr12:91539677..91539688,-#_5bbd6bfa93dc348311be18336a34ccfe | p@chr12:91539677..91539688, - |
| 6.88e-27 | FFCP PHASE2:Hg19::chr8:23564065..23564087,-#_0e1918df104d6a7e8cf6db36bfa4da00 | p1@NKX2-6 |
| 6.88e-27 | FFCP PHASE1:Hg19::chr8:23564065..23564087,-#_0e1918df104d6a7e8cf6db36bfa4da00 | p1@NKX2-6 |
| 1.64e-26 | FFCP PHASE2:Hg19::chr9:125231389..125231402,+#_fab9b48df74122f5f7a27b0d07b687eb | p2@OR1J2 |
| 1.64e-26 | FFCP PHASE1:Hg19::chr9:125231389..125231402,+#_fab9b48df74122f5f7a27b0d07b687eb | p2@OR1J2 |
| 3.62e-26 | FFCP PHASE2:Hg19::chr9:110047130..110047161,+#_5c9708d9e35b478968b68c4990377356 | p9@RAD23B |
| 3.62e-26 | FFCP PHASE1:Hg19::chr9:110047130..110047161,+#_5c9708d9e35b478968b68c4990377356 | p9@RAD23B |
| 2.55e-25 | FFCP PHASE2:Hg19::chr2:238187300..238187323,-#_604bd4d3cc4ee0bca84192bdb96558ef | p@chr2:238187300..238187323, - |
| 2.55e-25 | FFCP PHASE1:Hg19::chr2:238187300..238187323,-#_604bd4d3cc4ee0bca84192bdb96558ef | p@chr2:238187300..238187323, - |
| 5.73e-25 | FFCP PHASE1:Hg19::chr19:43689230..43689259,+#_82cfaf0355f9e432a9e1177d66ef14d6 | p@chr19:43689230..43689259, + |
| 5.73e-25 | FFCP PHASE2:Hg19::chr19:43689230..43689259,+#_82cfaf0355f9e432a9e1177d66ef14d6 | p@chr19:43689230..43689259, + |
| 6.31e-25 | FFCP PHASE1:Hg19::chr7:45952643..45952654,-#_cc483588a6d8155ef6d3e30b309b60d8 | p22@IGFBP3 |
| 6.31e-25 | FFCP PHASE2:Hg19::chr7:45952643..45952654,-#_cc483588a6d8155ef6d3e30b309b60d8 | p22@IGFBP3 |
| 7.53e-25 | FFCP PHASE1:Hg19::chr5:167181899..167181909,+#_34fd349033ff10bbf20ee044bf30992a | p14@ODZ2 |
| 7.53e-25 | FFCP PHASE2:Hg19::chr5:167181899..167181909,+#_34fd349033ff10bbf20ee044bf30992a | p14@ODZ2 |
| 1.06e-24 | FFCP PHASE1:Hg19::chr6:75914944..75914952,-#_fc4c7b0277b075409173677e3af431dc | p@chr6:75914944..75914952, - |
| 1.06e-24 | FFCP PHASE2:Hg19::chr6:75914944..75914952,-#_fc4c7b0277b075409173677e3af431dc | p@chr6:75914944..75914952, - |
| 2.95e-24 | FFCP PHASE2:Hg19::chr5:167148342..167148357,+#_b26bfdf5a1e84a2fc95b7f683a225997 | p1@ENST00000517346 |
| 2.95e-24 | FFCP PHASE1:Hg19::chr5:167148342..167148357,+#_b26bfdf5a1e84a2fc95b7f683a225997 | p1@ENST00000517346 |
| 3.45e-24 | FFCP PHASE1:Hg19::chr6:75886595..75886610,-#_495f350e07cc1c7054e3ddd891afae80 | p@chr6:75886595..75886610, - |
| 3.45e-24 | FFCP PHASE2:Hg19::chr6:75886595..75886610,-#_495f350e07cc1c7054e3ddd891afae80 | p@chr6:75886595..75886610, - |
| 5.36e-24 | FFCP PHASE2:Hg19::chr3:58021410..58021424,+#_949c56f57effe88d37fc39dcb28aefbb | p@chr3:58021410..58021424, + |
| 5.36e-24 | FFCP PHASE1:Hg19::chr3:58021410..58021424,+#_949c56f57effe88d37fc39dcb28aefbb | p@chr3:58021410..58021424, + |
| 8.78e-24 | FFCP PHASE1:Hg19::chr12:88813132..88813143,-#_b8dee6fc2606f698e16cc868563f5397 | p@chr12:88813132..88813143, - |
| 8.78e-24 | FFCP PHASE2:Hg19::chr12:88813132..88813143,-#_b8dee6fc2606f698e16cc868563f5397 | p@chr12:88813132..88813143, - |
| 1.02e-23 | FFCP PHASE2:Hg19::chr1:197886561..197886569,+#_0ede7fddab48d4e75f7ad2cbd10e4ea6 | p10@LHX9 |
| 1.02e-23 | FFCP PHASE1:Hg19::chr1:197886561..197886569,+#_0ede7fddab48d4e75f7ad2cbd10e4ea6 | p10@LHX9 |
| 1.03e-23 | FFCP PHASE2:Hg19::chr7:84122019..84122030,-#_55ba464c1e01eac3fce399f19edf596b | p18@SEMA3A |
| 1.03e-23 | FFCP PHASE1:Hg19::chr7:84122019..84122030,-#_55ba464c1e01eac3fce399f19edf596b | p18@SEMA3A |
| 3.29e-23 | FFCP PHASE1:Hg19::chrX:119693827..119693835,-#_ea8ea449bcf4a23ca6ab6bd46fba85a2 | p24@CUL4B |
| 3.29e-23 | FFCP PHASE2:Hg19::chrX:119693827..119693835,-#_ea8ea449bcf4a23ca6ab6bd46fba85a2 | p24@CUL4B |
