Personal tools

FFCP PHASE1:Mm9::chr2:90894211..90894271,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Psmc3_5end
|description=CAGE_peak_1_at_Psmc3_5end
|id=chr2:90894211..90894271,+
|id=chr2:90894211..90894271,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=49.005547214067,65.6073766361999,66.4298889508723,45.6720959073313,59.105696133669,63.1226062388706,56.7678716647127,39.1243670027976,60.2575730809134,36.748130632553,45.0303256433078,43.3162823344677,49.3058102201872,35.9297853942079,81.2787818830217,107.109416449218,142.011061260014,30.2843678743908,28.2455733227822,32.6780031884483,68.0346321208558,59.5745707205312,62.4267496042056,65.7568857680901,57.3523202667925,57.423196411502,59.8759174661114,61.4093013154784,48.4559719613753,51.6661766007858,65.4105006433149,88.2692636108887,69.5023209970564,63.3926724061755,59.5034336687626,53.361321160076,54.3090487657902,58.5944283031671,81.2588758304752,83.7637990358077,42.940898626264,47.1301384621327,50.9785870682711,58.667917176619,56.4669506892696,123.710510956973,44.5963066278382,59.3028425354815,123.683320879508,119.768817829759,65.3736588990443,63.2511283205875,33.2209559994318,41.3456420946466,53.1028202645093,98.2731045657317,83.3812310221782,63.9433394424028,47.3420518411459,49.7251520515711,36.7622214033584,96.2318471076335,85.3723004266694,40.0455374190223,49.4433181283487,34.8135256323589,27.5632101676932,37.2691756161908,38.7799150033706,42.5268705744826,45.4301916518985,53.1310830991075,59.8553745978873,41.4018901346545,41.2135525378416,34.0110951045708,56.1590993096882,76.3570281749423,72.3486771636907,46.5558595687584,52.9713456457952,53.1331637967895,68.120651756337,56.8390236131997,56.3825534296429,61.2827457785229,56.9486723196412,52.1918448310842,67.9263954198661,72.3219830221937,38.5519769973231,74.8568772973806,66.6371907033596,110.639154285753,68.2265238320053,65.8599524033083,65.8684330417916,51.8108180637296,71.7009372703918,55.1209736236131,39.7178443770239,65.4465034813021,91.7298862943925,120.881339536066,107.379556341562,107.424582961442,94.5330712177645,63.7146048832355,32.1082975722493,25.383605780085,61.0668350216798,55.4127170528097,55.8089503359662,55.3152090828125,37.1580314548827,49.3869703925625,28.1802263217186,26.172483602504,61.0381280845413,72.1480150765445,67.7983461673408,67.8825354389311,41.0061874679869,47.1377083188591,45.0310419648928,52.3686963177612,59.5481168794424,40.1934829765583,63.6621837636054,52.4267237916879,67.2525886143381,47.9999625071142,86.9121600961382,103.053329304123,74.3881199523225,72.5218445912877,43.3835690002347,49.8871952146473,21.9868799837297,39.5630689066571,61.6770899643216,48.2794419310293,54.1987010714101,52.4452766068288,49.2584253855614,48.9394411488126,45.0705295132296,30.2682943764648,68.1194857667781,59.9466274131987,46.0991945309546,71.8962002362445,55.8874970943452,47.3622946470147,54.3264840116971,45.5788471014349,49.1549231119264,57.6459311936962,66.7784223579643,61.1021028979731,84.4293815931946,81.0279276574567,54.4512891845984,76.9348146132349,76.9792893308017,76.7362017676346,81.2868406240846,85.7057612975024,62.6973028170361,65.6669856316381,59.9098502543874,53.655395385097,54.4484285921806,60.2586820234069,89.3732281397541,40.8531311145759,47.2498859666831,45.2210468994661,60.5738631520064,48.7697010906921,41.7530574683582,43.9670083678887,45.5874989881984,51.5511446765035,64.5359523700536,62.5856027951241,61.8284613648663,61.6765063327568,63.363328313714,58.4232615625244,61.8154822641625,65.7166201739412,73.9704813717019,59.0664810192298,39.4477074855781,54.1712532068536,50.8155516379179,48.8145306436617,44.2023394498558,70.5576507342498,62.4854936808672,64.4133195671799,80.3386619406174,98.7723025839277,92.972404688545,96.915570437872,93.1127957173228,75.9708053220113,64.9295922042621,63.86854251408,54.6395714231869,94.1745647235119,83.3855597858656,72.1953438476897,72.3927401625781,82.8458719666527,103.691705015665,88.2871644094962,23.2789019609922,48.6992928250146,44.326473592231,54.6579176196106,48.8155716440084,36.1813516074322,29.5174114698657,33.953254727257,41.6156780440344,44.0714732401062,41.1393303136317,34.0835694608735,31.428666699593,32.1120910050956,37.6978209848181,52.2149456465961,61.9622984003986,38.9070812289673,61.9725277352877,75.8359612251555,46.8853943777292,106.542731280245,45.7486918153572,66.7650252747252,39.4224817851022,45.4040716109849,36.761781223595,41.3291734951695,48.9820949026622,45.007402118342,46.6439577976898,55.9099090573944,26.2589157635297,47.5435161791571,38.1155484887368,20.1263550026493,50.4431525691859,75.7475584803542,87.3715079628131,79.2141334974772,65.8523221124123,37.8145231971031,41.8653834932518,50.1676546678958,51.3356224873999,58.1507634601901,62.1969790592493,69.1008139762852,7.14923172082955,57.7996111840506,70.5004826616012,46.7254736368871,36.8867685975929,43.1652538597011,40.1499610269175,40.4938382322417,50.219745525634,27.114505070569,48.2957191740367,66.7789324412994,54.8979050766079,69.3598636673792,69.2359595218192,83.8759997697263,59.1706098358597,58.2235448313,68.3483523191411,52.6286513306217,66.6700298530962,103.414282895575,109.902159087704,78.9284697562503,59.3224720678555,57.6599983573471,51.6867902028545,29.5947891584685,47.7667350307514,46.5601579720484,51.9505689352864,53.9447803717329,51.7519276078441,65.6789366894077,53.146172031391,61.2508904242629,51.5867593701336,39.1443767244763,315.104352724462,55.7696716744041,63.2051433546113,56.0019422430857,57.0886419771571,52.7143111531228,35.793957786955,69.0083239672936,82.1048666853316,146.158393099734,196.148434261606,50.2457681798803,72.3729018585886,71.5895371438846,63.401361613164,54.9611955699168,49.6703386953162,63.8237836951035,70.7432835166225,72.2919781628737,57.6885526378349,63.82297519162,73.4832420777733,60.2286128668462,46.4001301660829,43.3055032705054,104.555384039184,202.573888224196,124.73826995851,44.0472274393394,50.486585896368,31.5020793739696,43.0880441948922,28.0880378259804,87.5365356056453,78.2552902062201,93.3819686906216,81.8021147955953,94.5413877283486,89.1364798919847,95.1781725326846,81.9584589868081,88.3627697519199,77.664046762773,96.4184459057001,40.3015122135041,58.3908931679139,59.3180389646637,76.5088043592135,71.3312812786055,46.227319382736,58.9260263703237,46.854204600405,51.5502311998147,57.5398010750844,56.5879024158229,61.335187392773,59.735467193743,60.9964680308613,64.775942014498,60.4916181432146,57.1011292572567,48.2140503939869,62.2651432168501,65.1451579532289,65.3110966666362,61.9934093863034,58.2839130695637,63.0532848782715,62.6994244477323,62.0125828038699,65.5043581480229,62.6056964829423,45.4525240042768,55.5211884821135,60.0877342490937,62.2031185617928,59.4957470154109,47.0692130793985,54.9583271463481,47.0202532975271,44.693179242046,57.0039229565153,49.4124778827715,52.4021308502153
|phase1_expression=49.005547214067,65.6073766361999,66.4298889508723,45.6720959073313,59.105696133669,63.1226062388706,56.7678716647127,39.1243670027976,60.2575730809134,36.748130632553,45.0303256433078,43.3162823344677,49.3058102201872,35.9297853942079,81.2787818830217,107.109416449218,142.011061260014,30.2843678743908,28.2455733227822,32.6780031884483,68.0346321208558,59.5745707205312,62.4267496042056,65.7568857680901,57.3523202667925,57.423196411502,59.8759174661114,61.4093013154784,48.4559719613753,51.6661766007858,65.4105006433149,88.2692636108887,69.5023209970564,63.3926724061755,59.5034336687626,53.361321160076,54.3090487657902,58.5944283031671,81.2588758304752,83.7637990358077,42.940898626264,47.1301384621327,50.9785870682711,58.667917176619,56.4669506892696,123.710510956973,44.5963066278382,59.3028425354815,123.683320879508,119.768817829759,65.3736588990443,63.2511283205875,33.2209559994318,41.3456420946466,53.1028202645093,98.2731045657317,83.3812310221782,63.9433394424028,47.3420518411459,49.7251520515711,36.7622214033584,96.2318471076335,85.3723004266694,40.0455374190223,49.4433181283487,34.8135256323589,27.5632101676932,37.2691756161908,38.7799150033706,42.5268705744826,45.4301916518985,53.1310830991075,59.8553745978873,41.4018901346545,41.2135525378416,34.0110951045708,56.1590993096882,76.3570281749423,72.3486771636907,46.5558595687584,52.9713456457952,53.1331637967895,68.120651756337,56.8390236131997,56.3825534296429,61.2827457785229,56.9486723196412,52.1918448310842,67.9263954198661,72.3219830221937,38.5519769973231,74.8568772973806,66.6371907033596,110.639154285753,68.2265238320053,65.8599524033083,65.8684330417916,51.8108180637296,71.7009372703918,55.1209736236131,39.7178443770239,65.4465034813021,91.7298862943925,120.881339536066,107.379556341562,107.424582961442,94.5330712177645,63.7146048832355,32.1082975722493,25.383605780085,61.0668350216798,55.4127170528097,55.8089503359662,55.3152090828125,37.1580314548827,49.3869703925625,28.1802263217186,26.172483602504,61.0381280845413,72.1480150765445,67.7983461673408,67.8825354389311,41.0061874679869,47.1377083188591,45.0310419648928,52.3686963177612,59.5481168794424,40.1934829765583,63.6621837636054,52.4267237916879,67.2525886143381,47.9999625071142,86.9121600961382,103.053329304123,74.3881199523225,72.5218445912877,43.3835690002347,49.8871952146473,21.9868799837297,39.5630689066571,61.6770899643216,48.2794419310293,54.1987010714101,52.4452766068288,49.2584253855614,48.9394411488126,45.0705295132296,30.2682943764648,68.1194857667781,59.9466274131987,46.0991945309546,71.8962002362445,55.8874970943452,47.3622946470147,54.3264840116971,45.5788471014349,49.1549231119264,57.6459311936962,66.7784223579643,61.1021028979731,84.4293815931946,81.0279276574567,54.4512891845984,76.9348146132349,76.9792893308017,76.7362017676346,81.2868406240846,85.7057612975024,62.6973028170361,65.6669856316381,59.9098502543874,53.655395385097,54.4484285921806,60.2586820234069,89.3732281397541,40.8531311145759,47.2498859666831,45.2210468994661,60.5738631520064,48.7697010906921,41.7530574683582,43.9670083678887,45.5874989881984,51.5511446765035,64.5359523700536,62.5856027951241,61.8284613648663,61.6765063327568,63.363328313714,58.4232615625244,61.8154822641625,65.7166201739412,73.9704813717019,59.0664810192298,39.4477074855781,54.1712532068536,50.8155516379179,48.8145306436617,44.2023394498558,70.5576507342498,62.4854936808672,64.4133195671799,80.3386619406174,98.7723025839277,92.972404688545,96.915570437872,93.1127957173228,75.9708053220113,64.9295922042621,63.86854251408,54.6395714231869,94.1745647235119,83.3855597858656,72.1953438476897,72.3927401625781,82.8458719666527,103.691705015665,88.2871644094962,23.2789019609922,48.6992928250146,44.326473592231,54.6579176196106,48.8155716440084,36.1813516074322,29.5174114698657,33.953254727257,41.6156780440344,44.0714732401062,41.1393303136317,34.0835694608735,31.428666699593,32.1120910050956,37.6978209848181,52.2149456465961,61.9622984003986,38.9070812289673,61.9725277352877,75.8359612251555,46.8853943777292,106.542731280245,45.7486918153572,66.7650252747252,39.4224817851022,45.4040716109849,36.761781223595,41.3291734951695,48.9820949026622,45.007402118342,46.6439577976898,55.9099090573944,26.2589157635297,47.5435161791571,38.1155484887368,20.1263550026493,50.4431525691859,75.7475584803542,87.3715079628131,79.2141334974772,65.8523221124123,37.8145231971031,41.8653834932518,50.1676546678958,51.3356224873999,58.1507634601901,62.1969790592493,69.1008139762852,7.14923172082955,57.7996111840506,70.5004826616012,46.7254736368871,36.8867685975929,43.1652538597011,40.1499610269175,40.4938382322417,50.219745525634,27.114505070569,48.2957191740367,66.7789324412994,54.8979050766079,69.3598636673792,69.2359595218192,83.8759997697263,59.1706098358597,58.2235448313,68.3483523191411,52.6286513306217,66.6700298530962,103.414282895575,109.902159087704,78.9284697562503,59.3224720678555,57.6599983573471,51.6867902028545,29.5947891584685,47.7667350307514,46.5601579720484,51.9505689352864,53.9447803717329,51.7519276078441,65.6789366894077,53.146172031391,61.2508904242629,51.5867593701336,39.1443767244763,315.104352724462,55.7696716744041,63.2051433546113,56.0019422430857,57.0886419771571,52.7143111531228,35.793957786955,69.0083239672936,82.1048666853316,146.158393099734,196.148434261606,50.2457681798803,72.3729018585886,71.5895371438846,63.401361613164,54.9611955699168,49.6703386953162,63.8237836951035,70.7432835166225,72.2919781628737,57.6885526378349,63.82297519162,73.4832420777733,60.2286128668462,46.4001301660829,43.3055032705054,104.555384039184,202.573888224196,124.73826995851,44.0472274393394,50.486585896368,31.5020793739696,43.0880441948922,28.0880378259804,87.5365356056453,78.2552902062201,93.3819686906216,81.8021147955953,94.5413877283486,89.1364798919847,95.1781725326846,81.9584589868081,88.3627697519199,77.664046762773,96.4184459057001,40.3015122135041,58.3908931679139,59.3180389646637,76.5088043592135,71.3312812786055,46.227319382736,58.9260263703237,46.854204600405,51.5502311998147,57.5398010750844,56.5879024158229,61.335187392773,59.735467193743,60.9964680308613,64.775942014498,60.4916181432146,57.1011292572567,48.2140503939869,62.2651432168501,65.1451579532289,65.3110966666362,61.9934093863034,58.2839130695637,63.0532848782715,62.6994244477323,62.0125828038699,65.5043581480229,62.6056964829423,45.4525240042768,55.5211884821135,60.0877342490937,62.2031185617928,59.4957470154109,47.0692130793985,54.9583271463481,47.0202532975271,44.693179242046,57.0039229565153,49.4124778827715,52.4021308502153
|short_description=p1@Psmc3
|short_description=p1@Psmc3
}}
}}

Revision as of 18:01, 18 April 2012

Short description:p1@Psmc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Psmc3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000002171, ENSMUST00000111441, ENSMUST00000152269_5end
EntrezGene:Psmc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Psmc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G749.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I565.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I666.43
CD326+ enterocyte, pool1.CNhs13542.11848-124I345.67
CD326+ enterocyte, pool2.CNhs13197.11849-124I459.11
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I763.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I856.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E939.12
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E760.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F236.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E645.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F143.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E449.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E835.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A181.28
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3107.11
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5142.01
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A230.28
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A632.68
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A368.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H259.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I962.43
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D165.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D257.35
GP2+ M cell, pool1.CNhs13228.11845-124H957.42
GP2+ M cell, pool2.CNhs13231.11846-124I159.88
GP2+ M cell, pool3.CNhs13240.11847-124I261.41
Ileum epithelium, pool1.CNhs13199.10252-104B948.46
Ileum epithelium, pool2.CNhs13232.10253-104C151.67
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C865.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I388.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G669.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F559.50
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F653.36
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F754.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G858.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H181.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H383.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G942.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H247.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H450.98
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D858.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D956.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3123.71
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B744.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C259.30
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8123.68
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3119.77
Mouse Astrocytes, donor2.CNhs12078.11552-120C465.37
Mouse Astrocytes, donor3.CNhs12107.11633-122C463.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.22
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I941.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A153.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C198.27
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E183.38
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C563.94
Mouse Granule cells, donor1.CNhs12131.11713-123C347.34
Mouse Granule cells, donor2.CNhs12357.11731-123E349.73
Mouse Granule cells, donor3.CNhs12108.11636-122C736.76
Mouse Meningeal cells, donor1.CNhs12132.11716-123C696.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D185.37
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C740.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E749.44
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D234.81
Mouse Microglia, donor1.CNhs12629.11718-123C827.56
Mouse Microglia, donor2.CNhs12634.11736-123E837.27
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D538.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F542.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D945.43
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F153.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D559.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D241.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F241.21
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.01
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D356.16
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F376.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D772.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D446.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F452.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D853.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E468.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E556.84
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I656.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D661.28
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F656.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E152.19
Mouse Schwann, donor1.CNhs12507.11728-123D967.93
Mouse Schwann, donor2.CNhs12573.11746-123F972.32
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G338.55
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F774.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C466.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C8110.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F468.23
Mouse hepatocyte, donor8.CNhs13091.11824-124F665.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A765.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I751.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E371.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I855.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G639.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H165.45
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I891.73
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6120.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1107.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2107.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G394.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B663.71
accessory axillary lymph node, adult.CNhs10475.1063-29H932.11
adrenal gland, adult.CNhs10508.49-24D725.38
adrenal gland, embryo E14.CNhs11038.406-44C561.07
adrenal gland, embryo E16.CNhs11004.1254-43D655.41
adrenal gland, embryo E17.CNhs11043.1263-45I155.81
adrenal gland, embryo E18.CNhs11026.1262-18F555.32
adrenal gland, neonate N00.CNhs11191.1311-23C137.16
adrenal gland, neonate N25.CNhs11223.1377-27I349.39
amnion, adult pregnant day17.5.CNhs10488.583-22A828.18
aorta, adult.CNhs10498.46-23H126.17
bone (os femoris), adult.CNhs10483.56-12G261.04
bone (os femoris), neonate N02.CNhs11227.1985-43F572.15
bone (os femoris), neonate N16.CNhs11225.1525-43A667.80
bone (os femoris), neonate N20.CNhs11195.1350-25C367.88
cecum, adult.CNhs10467.37-13H441.01
cerebellum, adult.CNhs10494.15-8B247.14
cerebellum, neonate N30.CNhs11135.1395-42I245.03
colon, adult.CNhs10468.36-18H752.37
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C759.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D140.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D463.66
corpora quadrigemina, adult.CNhs10501.16-22A452.43
corpus striatum, adult.CNhs10487.19-21D867.25
corpus striatum, neonate N00.CNhs11226.630-43F148.00
cortex, adult.CNhs10473.12-14D586.91
cortex, neonate N30.CNhs11107.1392-42F2103.05
diencephalon, adult.CNhs10482.20-12F274.39
diencephalon, neonate N30.CNhs11201.1388-42B272.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B143.38
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A249.89
epididymis, adult.CNhs10490.58-23B221.99
eyeball, adult.CNhs10484.31-12G439.56
eyeball, embryo E12.CNhs11016.345-16C661.68
eyeball, embryo E14.CNhs10521.399-16E248.28
eyeball, embryo E15.CNhs10593.426-16C954.20
eyeball, embryo E17.CNhs11023.1261-18D452.45
eyeball, neonate N00.CNhs11207.633-15C649.26
eyeball, neonate N01.CNhs11140.1532-43E748.94
eyeball, neonate N02.CNhs11205.1551-44G845.07
eyeball, neonate N16.CNhs11188.777-19A230.27
forelimb, embryo E11.CNhs10596.335-25E268.12
forelimb, embryo E12.CNhs10600.359-14H259.95
forelimb, embryo E13.CNhs10589.384-1E246.10
forelimb, embryo E14.CNhs10577.413-26A871.90
forelimb, embryo E15.CNhs11007.437-20E755.89
forelimb, embryo E17.CNhs10598.1517-43C447.36
forelimb, embryo E18.CNhs11008.1520-43B554.33
gonad, embryo E13.CNhs11044.1564-45I645.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C849.15
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D257.65
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D566.78
heart, embryo E11.CNhs10586.331-24E961.10
heart, embryo E12.CNhs11015.353-12F584.43
heart, embryo E13.CNhs11013.376-3I981.03
heart, embryo E14.CNhs10597.403-26D454.45
heart, embryo E15.CNhs11017.431-16C876.93
heart, embryo E16.CNhs11021.457-17C676.98
heart, embryo E17.CNhs11025.479-18E576.74
heart, embryo E18.CNhs11030.1283-20G381.29
heart, neonate N00.CNhs11213.639-21E385.71
heart, neonate N03.CNhs11221.1349-25I262.70
heart, neonate N10.CNhs11118.749-24G165.67
heart, neonate N16.CNhs11209.782-15G159.91
heart, neonate N20.CNhs11127.821-26I653.66
heart, neonate N25.CNhs11196.1351-25D354.45
heart, neonate N30.CNhs11202.1390-42D260.26
hippocampus, adult.CNhs10478.13-16E889.37
hippocampus, neonate N00.CNhs11228.627-43G140.85
intestinal mucosa, adult.CNhs10506.860-29I347.25
intestine, adult.CNhs10496.178-9A345.22
intestine, embryo E12.CNhs11019.1251-16I560.57
intestine, embryo E13.CNhs11010.381-16D548.77
intestine, embryo E15.CNhs10602.976-16D841.75
intestine, embryo E16.CNhs10585.463-22H443.97
intestine, embryo E17.CNhs10582.482-18D345.59
intestine, embryo E18.CNhs10526.1289-20F751.55
intestine, neonate N00.CNhs11126.644-26D164.54
intestine, neonate N01.CNhs11192.1322-23E962.59
intestine, neonate N06.CNhs11102.688-20B861.83
intestine, neonate N07.CNhs11095.720-20F261.68
intestine, neonate N10.CNhs11098.755-23A563.36
intestine, neonate N20.CNhs11187.827-18D158.42
intestine, neonate N25.CNhs11121.1352-25E361.82
intestine, neonate N30.CNhs11131.1384-42G165.72
kidney, embryo E14.CNhs10606.411-4I973.97
kidney, embryo E15.CNhs10997.434-16F859.07
kidney, embryo E16.CNhs10584.464-22A539.45
kidney, embryo E17.CNhs11028.483-18I254.17
kidney, embryo E18.CNhs11001.1288-20C750.82
kidney, neonate N00.CNhs11214.646-21G748.81
kidney, neonate N10.CNhs11206.758-6D544.20
kidney, neonate N20.CNhs11113.832-19I170.56
kidney, neonate N25.CNhs11122.1353-25F362.49
kidney, neonate N30.CNhs11203.1385-42H164.41
liver, adult pregnant day01.CNhs10466.508-5B280.34
liver, embryo E12.CNhs10601.355-15F898.77
liver, embryo E13.CNhs10524.378-3H692.97
liver, embryo E14.CNhs10594.409-16E196.92
liver, embryo E15.CNhs10520.433-16D793.11
liver, embryo E16.CNhs10523.462-17F575.97
liver, embryo E17.CNhs10510.481-18A364.93
liver, embryo E18.CNhs10579.499-43G463.87
liver, neonate N00.CNhs11117.641-24F454.64
liver, neonate N03.CNhs11123.1345-25G294.17
liver, neonate N06.CNhs11101.684-20A883.39
liver, neonate N07.CNhs11103.716-20H272.20
liver, neonate N10.CNhs11115.751-24B972.39
liver, neonate N20.CNhs11220.823-25A382.85
liver, neonate N25.CNhs11198.1368-26H1103.69
liver, neonate N30.CNhs11106.1382-42D188.29
lung, adult.CNhs10474.28-22B123.28
lung, embryo E12.CNhs10522.354-16G248.70
lung, embryo E14.CNhs10604.404-26F844.33
lung, embryo E15.CNhs11020.432-17C554.66
lung, embryo E16.CNhs10998.458-17B648.82
lung, embryo E17.CNhs10605.480-44A636.18
lung, embryo E18.CNhs10583.1287-20I629.52
lung, neonate N00.CNhs11224.640-42C633.95
lung, neonate N06.CNhs11212.683-20E541.62
lung, neonate N07.CNhs11111.715-19A344.07
lung, neonate N10.CNhs11219.750-23E641.14
lung, neonate N20.CNhs11109.822-18A434.08
lung, neonate N25.CNhs11119.1359-25C731.43
lung, neonate N30.CNhs11133.1394-42H232.11
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A137.70
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A152.21
mammary gland, adult lactating day02.CNhs10480.595-22B661.96
mammary gland, adult pregnant day19.CNhs10476.588-5H238.91
medulla oblongata, adult.CNhs10477.17-12C261.97
medulla oblongata, neonate N30.CNhs11200.1396-42A375.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C746.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2106.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E145.75
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E266.77
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E339.42
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D745.40
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D836.76
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D941.33
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D448.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D545.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D646.64
olfactory brain, adult.CNhs10489.18-22I955.91
ovary, adult.CNhs10507.91-2I726.26
ovary, embryo E18.CNhs11040.505-44H747.54
ovary, neonate N00.CNhs11217.1299-22I438.12
oviduct, adult pregnant day01.CNhs10500.988-6G620.13
pancreas, adult.CNhs10486.34-16E450.44
pancreas, embryo E14.CNhs11012.405-44F475.75
pancreas, embryo E15.CNhs11042.1556-45F287.37
pancreas, embryo E16.CNhs11003.460-26E579.21
pancreas, embryo E17.CNhs10599.1558-45G365.85
pancreas, embryo E18.CNhs10580.1535-43I737.81
pancreas, neonate N00.CNhs11105.645-26G941.87
pancreas, neonate N01.CNhs11138.1531-43D750.17
pancreas, neonate N02.CNhs11139.1539-43D851.34
pancreas, neonate N16.CNhs11136.787-43B658.15
pancreas, neonate N25.CNhs11094.1555-45E262.20
pancreas, neonate N30.CNhs11182.1548-44H569.10
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E657.80
pituitary gland, embryo E13.CNhs11009.370-44C770.50
pituitary gland, embryo E14.CNhs11037.398-44A546.73
pituitary gland, embryo E15.CNhs10592.427-16B936.89
pituitary gland, embryo E16.CNhs11036.449-43F643.17
pituitary gland, embryo E17.CNhs11039.1265-44F540.15
pituitary gland, neonate N00.CNhs11190.1308-22E940.49
placenta, adult pregnant day10.CNhs10472.539-13I750.22
placenta, adult pregnant day17.CNhs10464.577-18G327.11
prostate, adult.CNhs10470.859-1F848.30
skin, adult.CNhs10492.30-1C366.78
skin, neonate N00.CNhs11124.650-25G454.90
skin, neonate N03.CNhs11215.662-22H369.36
skin, neonate N06.CNhs11097.693-20I569.24
skin, neonate N10.CNhs11108.762-6C483.88
small intestine, neonate N16.CNhs11114.790-21I159.17
spinal cord, adult.CNhs10505.24-13C958.22
spleen, adult.CNhs10465.25-2G268.35
spleen, embryo E16.CNhs11035.461-43C152.63
spleen, embryo E18.CNhs11011.1271-21F266.67
spleen, neonate N10.CNhs11116.752-24D1103.41
spleen, neonate N20.CNhs11112.824-19H1109.90
spleen, neonate N25.CNhs11099.1354-25G378.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C659.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C957.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D351.69
stomach, adult.CNhs10503.33-1H629.59
stomach, embryo E12.CNhs10588.356-43E347.77
stomach, embryo E15.CNhs10603.1252-16G846.56
stomach, embryo E16.CNhs11022.459-17D451.95
stomach, embryo E17.CNhs11006.1035-18D553.94
stomach, embryo E18.CNhs10999.1286-20C651.75
stomach, neonate N03.CNhs11193.1340-24B865.68
stomach, neonate N07.CNhs11210.718-18A953.15
stomach, neonate N25.CNhs11104.1355-25E461.25
stomach, neonate N30.CNhs11134.1386-42I151.59
submandibular gland, adult.CNhs10469.59-29C139.14
testis, adult.CNhs10504.57-7G5315.10
testis, embryo E13.CNhs11031.389-23F555.77
testis, embryo E15.CNhs11034.443-27C563.21
testis, embryo E16.CNhs11033.470-26G556.00
testis, embryo E17.CNhs11029.486-18I557.09
testis, embryo E18.CNhs11027.503-18G552.71
testis, neonate N00.CNhs11189.1300-22B735.79
testis, neonate N07.CNhs11222.726-26I469.01
testis, neonate N10.CNhs11204.763-44D982.10
testis, neonate N20.CNhs11110.839-18H3146.16
testis, neonate N30.CNhs11130.1391-42E2196.15
thymus, adult.CNhs10471.38-12B550.25
thymus, embryo E14.CNhs11041.402-44I472.37
thymus, embryo E15.CNhs11005.430-45I271.59
thymus, embryo E16.CNhs11002.456-26C563.40
thymus, embryo E17.CNhs10581.478-18C154.96
thymus, embryo E18.CNhs10595.1273-19G449.67
thymus, neonate N02.CNhs11181.1541-43F863.82
thymus, neonate N03.CNhs11137.2104-43C770.74
thymus, neonate N06.CNhs11197.681-26C472.29
thymus, neonate N07.CNhs11211.713-19D357.69
thymus, neonate N10.CNhs11194.748-24E463.82
thymus, neonate N20.CNhs11186.820-7A273.48
thymus, neonate N25.CNhs11125.1362-25G760.23
thymus, neonate N30.CNhs11132.1393-42G246.40
tongue, adult.CNhs10499.32-1B443.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3104.56
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7202.57
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5124.74
urinary bladder, adult.CNhs10481.879-12E444.05
uterus, adult pregnant day19.CNhs10497.590-15F550.49
uterus, adult.CNhs10509.92-27E531.50
vagina, adult.CNhs10502.89-27D543.09
vesicular gland, adult.CNhs10491.51-27F828.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A187.54
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A278.26
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A393.38
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D781.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A494.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A589.14
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A695.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A781.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A888.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A977.66
whole body, embryo E11.CNhs11014.324-5I896.42
whole body, embryo E12.CNhs10587.857-27C940.30
whole body, embryo E13.CNhs10512.372-23H258.39
whole body, embryo E14.5.CNhs10578.420-27D259.32
whole body, embryo E14.CNhs10519.395-14B176.51
whole body, embryo E16.CNhs10514.453-14F271.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G546.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G558.93
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G546.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G551.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G557.54
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G556.59
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G561.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G559.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G561.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G564.78
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G560.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G557.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G548.21
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G562.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G565.15
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G565.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G561.99
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G558.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G563.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G562.70
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G562.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G565.50
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G562.61
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G545.45
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G555.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G560.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G562.20
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G559.50
whole body, embryo E17.5.CNhs10513.490-9F947.07
whole body, embryo E17.CNhs10517.475-3I554.96
whole body, embryo E18.CNhs10516.493-3B347.02
whole body, neonate N00.CNhs10525.657-19C244.69
whole body, neonate N01.CNhs10576.659-23C657.00
whole body, neonate N06.CNhs10515.692-21D149.41
whole body, neonate N10.CNhs10518.761-6B452.40





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:90894211..90894271,%2B&oldid=926930"