CL:0002535: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002535
|name=epithelial cell of cervix
|namespace=cell
|def="An epithelial cell of the cervix." [GOC:tfm]
|xref=
|is_a=CL:0000066;;CL:0002371
|synonym="cer...") |
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|is_a=CL:0000066;;CL:0002371 | |is_a=CL:0000066;;CL:0002371 | ||
|synonym="cervical canal epithelial cell" EXACT [GOC:tfm];;"cervical canal of uterus epithelial cell" EXACT [GOC:tfm];;"cervix epithelial cell" EXACT [GOC:tfm];;"cervix of uterus epithelial cell" EXACT [GOC:tfm];;"epithelial cell of cervical canal" EXACT [GOC:tfm];;"epithelial cell of cervical canal of uterus | |synonym="cervical canal epithelial cell" EXACT [GOC:tfm];;"cervical canal of uterus epithelial cell" EXACT [GOC:tfm];;"cervix epithelial cell" EXACT [GOC:tfm];;"cervix of uterus epithelial cell" EXACT [GOC:tfm];;"epithelial cell of cervical canal" EXACT [GOC:tfm];;"epithelial cell of cervical canal of uterus" EXACT [GOC:tfm];;"epithelial cell of cervix of uterus" EXACT [GOC:tfm];;"epithelial cell of neck of uterus" EXACT [GOC:tfm];;"epithelial cell of uterine cervix" EXACT [GOC:tfm];;"neck of uterus epithelial cell" EXACT [GOC:tfm];;"uterine cervix epithelial cell" EXACT [GOC:tfm] | ||
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|part_of=UBERON:0004801 | |part_of=UBERON:0000002;;UBERON:0004801 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
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Revision as of 17:41, 15 June 2012
| Name: | epithelial cell of cervix |
|---|---|
| Namespace: | cell |
| Definition: | "An epithelial cell of the cervix." [GOC:tfm] |
| Synonyms: |
"cervical canal epithelial cell" EXACT [GOC:tfm] "cervical canal of uterus epithelial cell" EXACT [GOC:tfm] "cervix epithelial cell" EXACT [GOC:tfm] "cervix of uterus epithelial cell" EXACT [GOC:tfm] "epithelial cell of cervical canal" EXACT [GOC:tfm] "epithelial cell of cervical canal of uterus" EXACT [GOC:tfm] "epithelial cell of cervix of uterus" EXACT [GOC:tfm] "epithelial cell of neck of uterus" EXACT [GOC:tfm] "epithelial cell of uterine cervix" EXACT [GOC:tfm] "neck of uterus epithelial cell" EXACT [GOC:tfm] "uterine cervix epithelial cell" EXACT [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-02-24T08:20:08Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000066(epithelial cell),CL:0002371(somatic cell) |
|---|---|
| part_of: | UBERON:0000002(uterine cervix),UBERON:0004801(cervix epithelium) |
Children
| is a: | FF:10431-106D8 (epidermoid carcinoma cell line:Ca Ski),FF:10589-108D4 (argyrophil small cell carcinoma cell line:TC-YIK) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
- 10589-108D4 (argyrophil small cell carcinoma cell line:TC-YIK)
Mouse (Mus musculus)
- 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
- 10589-108D4 (argyrophil small cell carcinoma cell line:TC-YIK)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002535 (epithelial cell of cervix), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.99e-131 | FFCP PHASE2:Hg19::chr14:104394868..104394874,+#_24fcdb4caea10c9af800c9ee8a2bb468 | p5@TDRD9 |
| 8.99e-131 | FFCP PHASE1:Hg19::chr14:104394868..104394874,+#_24fcdb4caea10c9af800c9ee8a2bb468 | p5@TDRD9 |
| 5.68e-99 | FFCP PHASE1:Hg19::chr17:34838949..34838959,-#_19326eb9616ad6f29f6c1f2a0220e75e | p@chr17:34838949..34838959, - |
| 5.68e-99 | FFCP PHASE2:Hg19::chr17:34838949..34838959,-#_19326eb9616ad6f29f6c1f2a0220e75e | p@chr17:34838949..34838959, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:121054330..121054333,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:121054330..121054333, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:16838056..16838070,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr19:16838056..16838070, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:21918433..21918444,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr20:21918433..21918444, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:182548440..182548448,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr2:182548440..182548448, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:41508303..41508308,-#_57c29b5b2555c5f03a8b47a182e1721f | p2@NKX6-3 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:70826186..70826193,-#_57c29b5b2555c5f03a8b47a182e1721f | p4@ENST00000413943 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:131117116..131117123,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr12:131117116..131117123, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr14:23465559..23465575,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr14:23465559..23465575, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:121056349..121056360,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:121056349..121056360, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:21918392..21918404,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr20:21918392..21918404, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:2436040..2436051,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr11:2436040..2436051, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:40984132..40984133,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr5:40984132..40984133, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:43726566..43726571,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr20:43726566..43726571, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:27892945..27892952,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr17:27892945..27892952, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:27892902..27892907,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr17:27892902..27892907, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:9059355..9059366,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr2:9059355..9059366, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:7184828..7184838,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr19:7184828..7184838, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:35237473..35237478,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr9:35237473..35237478, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:41484957..41484961,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:41484957..41484961, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:121062548..121062551,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:121062548..121062551, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:22001308..22001310,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:22001308..22001310, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:39755914..39755961,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr17:39755914..39755961, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:39290499..39290502,-#_57c29b5b2555c5f03a8b47a182e1721f | p8@KCNK16 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:43727212..43727217,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr20:43727212..43727217, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:49467630..49467640,+#_57c29b5b2555c5f03a8b47a182e1721f | p3@GLYATL3 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:41485173..41485181,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:41485173..41485181, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:32314379..32314387,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr17:32314379..32314387, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:131117194..131117202,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr12:131117194..131117202, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:127258120..127258138,-#_57c29b5b2555c5f03a8b47a182e1721f | p3@PAX4 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:2439293..2439304,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr11:2439293..2439304, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:2428348..2428358,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr11:2428348..2428358, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:49467678..49467693,+#_57c29b5b2555c5f03a8b47a182e1721f | p2@GLYATL3 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:54417667..54417685,+#_57c29b5b2555c5f03a8b47a182e1721f | p9@LRRC42 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:26911596..26911605,-#_57c29b5b2555c5f03a8b47a182e1721f | p8@SPAG5 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:91077381..91077392,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr9:91077381..91077392, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:41485217..41485222,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:41485217..41485222, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:20705180..20705181,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr6:20705180..20705181, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr18:74350663..74350688,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr18:74350663..74350688, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:20392704..20392711,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr20:20392704..20392711, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:79742692..79742706,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr11:79742692..79742706, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr22:32555214..32555221,-#_57c29b5b2555c5f03a8b47a182e1721f | p2@C22orf42 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:121056304..121056311,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:121056304..121056311, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:21918450..21918454,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr20:21918450..21918454, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:93389079..93389083,+#_57c29b5b2555c5f03a8b47a182e1721f | p24@CHGA |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:182548451..182548457,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr2:182548451..182548457, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:129597668..129597672,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr6:129597668..129597672, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:131117129..131117135,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr12:131117129..131117135, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:121056549..121056554,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:121056549..121056554, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:21918433..21918444,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr20:21918433..21918444, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:2436082..2436085,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr11:2436082..2436085, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:35237460..35237466,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr9:35237460..35237466, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:33464773..33464782,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:33464773..33464782, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:22737597..22737604,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr4:22737597..22737604, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:27892922..27892925,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr17:27892922..27892925, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:2436019..2436030,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr11:2436019..2436030, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:14849447..14849450,-#_57c29b5b2555c5f03a8b47a182e1721f | p7@GUCY2C |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:40984132..40984133,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr5:40984132..40984133, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:43726566..43726571,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr20:43726566..43726571, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:79225428..79225433,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr17:79225428..79225433, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:9059377..9059382,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr2:9059377..9059382, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:41485005..41485017,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:41485005..41485017, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:121066549..121066554,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:121066549..121066554, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:4810204..4810210,+#_57c29b5b2555c5f03a8b47a182e1721f | p34@ITPR1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:9059355..9059366,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr2:9059355..9059366, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:127258190..127258201,-#_57c29b5b2555c5f03a8b47a182e1721f | p2@PAX4 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:14849414..14849417,-#_57c29b5b2555c5f03a8b47a182e1721f | p8@GUCY2C |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:170105957..170105992,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr5:170105957..170105992, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr22:44377129..44377137,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr22:44377129..44377137, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:49467646..49467657,+#_57c29b5b2555c5f03a8b47a182e1721f | p1@GLYATL3 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:26911586..26911592,-#_57c29b5b2555c5f03a8b47a182e1721f | p9@SPAG5 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:182546258..182546267,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr2:182546258..182546267, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:41485201..41485208,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:41485201..41485208, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:70826186..70826193,-#_57c29b5b2555c5f03a8b47a182e1721f | p4@ENST00000413943 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:32314322..32314327,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr17:32314322..32314327, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr21:47588743..47588750,-#_57c29b5b2555c5f03a8b47a182e1721f | p9@C21orf56 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:43727212..43727217,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr20:43727212..43727217, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:49467718..49467724,+#_57c29b5b2555c5f03a8b47a182e1721f | p4@GLYATL3 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:41486855..41486866,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:41486855..41486866, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:182548440..182548448,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr2:182548440..182548448, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:150871938..150871949,-#_57c29b5b2555c5f03a8b47a182e1721f | p3@GBX1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:25661559..25661563,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr6:25661559..25661563, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:121056349..121056360,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:121056349..121056360, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:207193762..207193766,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr1:207193762..207193766, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:21918470..21918480,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr20:21918470..21918480, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr19:7184762..7184771,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr19:7184762..7184771, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:131117147..131117158,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr12:131117147..131117158, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:121058540..121058543,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:121058540..121058543, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:21918450..21918454,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr20:21918450..21918454, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:2436541..2436561,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr11:2436541..2436561, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:35237473..35237478,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr9:35237473..35237478, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:41484957..41484961,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr8:41484957..41484961, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:27892945..27892952,+#_57c29b5b2555c5f03a8b47a182e1721f | p@chr17:27892945..27892952, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:131117116..131117123,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr12:131117116..131117123, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:2436040..2436051,-#_57c29b5b2555c5f03a8b47a182e1721f | p@chr11:2436040..2436051, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:39290499..39290502,-#_57c29b5b2555c5f03a8b47a182e1721f | p8@KCNK16 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:49467576..49467583,+#_57c29b5b2555c5f03a8b47a182e1721f | p5@GLYATL3 |
