Personal tools

FFCP PHASE1:Mm9::chr4:119212257..119212303,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=CL:0000791!7.67e-07!9;CL:0000789!7.67e-07!9;CL:0002420!7.67e-07!9;CL:0002419!7.67e-07!9;CL:0000790!7.67e-07!9
|ontology_enrichment_celltype=CL:0000791!7.67e-07!9;CL:0000789!7.67e-07!9;CL:0002420!7.67e-07!9;CL:0002419!7.67e-07!9;CL:0000790!7.67e-07!9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000153!4.73e-08!94;UBERON:0007811!5.55e-07!86
|phase1_expression=11.5307169915452,16.40184415905,19.1099680543605,11.1911758183527,18.5331420080148,11.7515490338323,8.64366770203445,23.1130748960421,36.1827015929784,29.7261948428932,20.2037202506096,28.7179772383211,23.7969014604376,23.0789862386153,9.32707333083856,11.3386149738303,11.8925519281785,15.930839350591,26.3259712523018,18.2487550273153,15.5629220976458,9.03547655928056,6.79119451761232,7.03966660290989,8.02932483735095,7.46501553349526,8.61523992318149,9.26526300549323,6.84084310042946,12.3494763582366,7.09537634096975,13.3356441426523,6.1506478758457,0,9.82095507154334,10.140313366868,10.6168065256432,9.62622750694888,12.5013655123808,8.37637990358077,9.41170380849623,21.8574555186703,15.0508209439658,7.93149953246137,8.00877756634165,6.60768307782054,5.47673941043627,2.61630187656536,3.51497892375155,5.63846707315422,3.77963338388479,7.18762821824858,17.6171736360623,33.3666585325218,37.3064117048135,8.7468208252222,8.5960031981627,6.18806510732931,16.1853168687678,6.87688273053643,13.3104594736298,4.74382344896785,3.55717918444456,7.19919773825119,2.96659908770092,4.2628806896766,3.29560121570245,3.07374644257244,19.3899575016853,18.765825428105,17.2466468308133,11.7116903605559,7.95126747425809,18.0061474845982,12.7474476454254,11.0306254393203,18.7196997698961,18.5146640223522,17.8183578577242,18.7278528576875,12.2593442427229,20.3156214517136,9.21303896704557,14.6318278608237,14.515833538797,12.374400589894,16.5151149726959,19.5719418116566,14.9937862799704,10.8067330952703,21.4499721639242,15.487629785665,18.3592260101093,2.15881276655127,3.89865850468601,6.2723764193627,11.5164424508037,6.47635225796619,4.1565760736459,2.82671659608272,16.760366953425,14.115912515575,15.2883143823987,7.11066703153331,8.44315059943735,9.88103475352884,11.1215377903252,10.3907330544345,32.6261733395436,18.5552673831031,11.9704875468634,10.3518262626128,8.99400439298628,10.399862198131,16.9327738275415,13.1949920896159,18.7868175478124,21.256105467227,14.153768831198,16.8237523945306,14.575540218386,13.5765070877862,7.45567044872489,20.7874365878198,23.0391377494801,12.2619386500124,10.9031763300387,8.39863823390771,7.37007317023775,19.9221550408414,18.7575247155637,33.8010207183605,22.0756886644191,23.2701066170601,17.2464076984435,16.5486088329113,23.3212143217224,12.5651040316194,15.9215337813215,12.8369532090749,17.3060189140396,14.0240283704418,12.0641626969584,14.6183673300644,25.4456506825966,18.1921482804487,19.5836604329833,23.2833033665114,14.2274875335676,17.5868654556072,14.0760899331159,13.5901354105096,21.9657326888222,22.984642990463,18.7261744131229,14.927570011387,3.51106593656617,5.66165395652373,7.10408748488982,15.7415587126981,12.4298811789981,14.7650890398032,16.8088762265499,17.5120166255189,14.8096428371883,19.0677834695334,15.5598572811779,21.0177616260905,17.9370236405694,14.4467368389604,22.6992666728396,17.8363984658905,12.2948064562988,16.7758023450465,21.6598647021051,26.9610084433725,25.7726650727362,12.4291766331866,17.0630600428187,19.9723537799977,14.6908905907186,12.5043785266472,12.6755484991576,11.7939888189787,12.8122846617018,14.493508015713,16.3367885720175,19.4977342600328,18.3266241891973,10.7858329038507,15.561939590978,17.922714592893,13.845756769575,15.3093006897037,14.6520056375005,16.2921062276251,17.2617713579187,21.6018325262181,19.919509194141,18.0084380535115,14.2868842335651,11.7227305725711,8.89357881261447,10.67808676583,13.3660116676978,9.44420872016386,8.31726497692862,8.92355491083942,11.7127891819453,9.49397253587675,11.0251954207024,7.68771956926628,14.3768206527355,13.3970741160661,11.8574315783533,10.1031551178845,7.17589654087649,7.23665282045051,24.9416806724916,16.8647356475731,14.5038829033403,16.1257831486429,14.5507953938871,16.7506257441816,14.2826184531608,27.123577052234,24.748717624672,22.1464689648775,23.5993057613081,16.877921415721,20.0314578964439,17.2132379711999,4.52373851817817,13.5976420954677,9.83528546038072,12.417153583713,18.7844190285717,16.2924244363162,6.88526770582037,16.6630811954886,13.566853434899,12.8844785617891,15.9413314322271,13.1432838873904,11.8083297263669,17.5507449089076,14.9779959619711,17.82760733259,18.1832377855401,23.1351347823701,18.4522110770749,13.7110514823787,23.2928351875614,21.7760562323747,22.5666735177937,11.6534705354391,11.4882951646605,12.8251454234011,8.85905678642318,12.912276213645,14.2135561242522,17.8131527443978,18.8943610543902,16.7499481705982,23.1920938864997,19.5957532171555,16.6815406819356,14.4048875225048,9.70190128370659,8.78781843629528,16.1379612614469,19.2638323010236,17.6067452044269,15.8321773539592,17.6003781047783,23.513359865884,12.5701186891328,27.8657767471101,25.8343082713449,20.4460815506448,18.0252239444736,16.4140899745061,17.488850197791,15.9465759729038,13.6696704638282,14.4470807574256,12.7784223885101,10.360265135258,15.8565304156389,15.7856939512501,13.9382312594961,16.5142713741916,19.2097963588149,10.5013767981662,13.91878371757,17.485474172909,15.768779759983,13.5907392409405,16.3771922809633,15.779128527024,17.1092653351445,13.8730649251536,13.73918716893,20.5041973318685,8.45539408026285,15.8487538806618,11.7475528224539,21.7785330945333,12.3993430538622,17.7403931765317,17.2515140809258,19.1400445720607,18.874681996628,17.6356408202984,15.2655903316669,23.7008340471134,8.71718425747706,11.7090491167903,12.9920822977795,13.2479754793936,13.510332125126,18.8706855746351,20.97191285879,16.4575313415481,19.127908470405,20.871020323326,20.855986478307,21.0703933192322,19.9859502730483,15.8711268530648,13.763129109192,18.5707683181615,17.2921154855001,15.6483571166074,13.7008207079363,15.9341913112521,16.0776284309299,14.5455910170255,16.942555278512,18.8733346967943,20.6242384838183,25.2624178045221,16.4419804744954,18.8848474347425,19.5756525067224,15.3109209096235,19.4851235863208,17.6038505995619,13.0772057956063,13.5668456956351,12.2928196142977,14.5864030240976,13.6248555708189,17.8328203196514,19.1132185909389,12.9802086060503,18.2923949467335,15.9199243411192,12.9274442944022,13.3924702384114,16.1063392848198,20.4240236171533,20.5044624171539,18.5754539600399,19.1209137809012,20.0625589282253,10.3021475200827,10.8927200899454,13.7147700954166,15.4403951358624,19.313331385733,11.3370204973216,13.5517507798076,18.9536721677355,17.9269413415317,12.3642764375786,18.3335553691913,8.41713407486608,16.7275375555086,21.1784637107461,11.0492381655816,20.1417893541756,18.7119412651707,17.2369298777183,15.9073493742878,15.6855869455258,18.9375448748155,19.4120448825174,11.8252596166415
|phase1_expression=11.5307169915452,16.40184415905,19.1099680543605,11.1911758183527,18.5331420080148,11.7515490338323,8.64366770203445,23.1130748960421,36.1827015929784,29.7261948428932,20.2037202506096,28.7179772383211,23.7969014604376,23.0789862386153,9.32707333083856,11.3386149738303,11.8925519281785,15.930839350591,26.3259712523018,18.2487550273153,15.5629220976458,9.03547655928056,6.79119451761232,7.03966660290989,8.02932483735095,7.46501553349526,8.61523992318149,9.26526300549323,6.84084310042946,12.3494763582366,7.09537634096975,13.3356441426523,6.1506478758457,0,9.82095507154334,10.140313366868,10.6168065256432,9.62622750694888,12.5013655123808,8.37637990358077,9.41170380849623,21.8574555186703,15.0508209439658,7.93149953246137,8.00877756634165,6.60768307782054,5.47673941043627,2.61630187656536,3.51497892375155,5.63846707315422,3.77963338388479,7.18762821824858,17.6171736360623,33.3666585325218,37.3064117048135,8.7468208252222,8.5960031981627,6.18806510732931,16.1853168687678,6.87688273053643,13.3104594736298,4.74382344896785,3.55717918444456,7.19919773825119,2.96659908770092,4.2628806896766,3.29560121570245,3.07374644257244,19.3899575016853,18.765825428105,17.2466468308133,11.7116903605559,7.95126747425809,18.0061474845982,12.7474476454254,11.0306254393203,18.7196997698961,18.5146640223522,17.8183578577242,18.7278528576875,12.2593442427229,20.3156214517136,9.21303896704557,14.6318278608237,14.515833538797,12.374400589894,16.5151149726959,19.5719418116566,14.9937862799704,10.8067330952703,21.4499721639242,15.487629785665,18.3592260101093,2.15881276655127,3.89865850468601,6.2723764193627,11.5164424508037,6.47635225796619,4.1565760736459,2.82671659608272,16.760366953425,14.115912515575,15.2883143823987,7.11066703153331,8.44315059943735,9.88103475352884,11.1215377903252,10.3907330544345,32.6261733395436,18.5552673831031,11.9704875468634,10.3518262626128,8.99400439298628,10.399862198131,16.9327738275415,13.1949920896159,18.7868175478124,21.256105467227,14.153768831198,16.8237523945306,14.575540218386,13.5765070877862,7.45567044872489,20.7874365878198,23.0391377494801,12.2619386500124,10.9031763300387,8.39863823390771,7.37007317023775,19.9221550408414,18.7575247155637,33.8010207183605,22.0756886644191,23.2701066170601,17.2464076984435,16.5486088329113,23.3212143217224,12.5651040316194,15.9215337813215,12.8369532090749,17.3060189140396,14.0240283704418,12.0641626969584,14.6183673300644,25.4456506825966,18.1921482804487,19.5836604329833,23.2833033665114,14.2274875335676,17.5868654556072,14.0760899331159,13.5901354105096,21.9657326888222,22.984642990463,18.7261744131229,14.927570011387,3.51106593656617,5.66165395652373,7.10408748488982,15.7415587126981,12.4298811789981,14.7650890398032,16.8088762265499,17.5120166255189,14.8096428371883,19.0677834695334,15.5598572811779,21.0177616260905,17.9370236405694,14.4467368389604,22.6992666728396,17.8363984658905,12.2948064562988,16.7758023450465,21.6598647021051,26.9610084433725,25.7726650727362,12.4291766331866,17.0630600428187,19.9723537799977,14.6908905907186,12.5043785266472,12.6755484991576,11.7939888189787,12.8122846617018,14.493508015713,16.3367885720175,19.4977342600328,18.3266241891973,10.7858329038507,15.561939590978,17.922714592893,13.845756769575,15.3093006897037,14.6520056375005,16.2921062276251,17.2617713579187,21.6018325262181,19.919509194141,18.0084380535115,14.2868842335651,11.7227305725711,8.89357881261447,10.67808676583,13.3660116676978,9.44420872016386,8.31726497692862,8.92355491083942,11.7127891819453,9.49397253587675,11.0251954207024,7.68771956926628,14.3768206527355,13.3970741160661,11.8574315783533,10.1031551178845,7.17589654087649,7.23665282045051,24.9416806724916,16.8647356475731,14.5038829033403,16.1257831486429,14.5507953938871,16.7506257441816,14.2826184531608,27.123577052234,24.748717624672,22.1464689648775,23.5993057613081,16.877921415721,20.0314578964439,17.2132379711999,4.52373851817817,13.5976420954677,9.83528546038072,12.417153583713,18.7844190285717,16.2924244363162,6.88526770582037,16.6630811954886,13.566853434899,12.8844785617891,15.9413314322271,13.1432838873904,11.8083297263669,17.5507449089076,14.9779959619711,17.82760733259,18.1832377855401,23.1351347823701,18.4522110770749,13.7110514823787,23.2928351875614,21.7760562323747,22.5666735177937,11.6534705354391,11.4882951646605,12.8251454234011,8.85905678642318,12.912276213645,14.2135561242522,17.8131527443978,18.8943610543902,16.7499481705982,23.1920938864997,19.5957532171555,16.6815406819356,14.4048875225048,9.70190128370659,8.78781843629528,16.1379612614469,19.2638323010236,17.6067452044269,15.8321773539592,17.6003781047783,23.513359865884,12.5701186891328,27.8657767471101,25.8343082713449,20.4460815506448,18.0252239444736,16.4140899745061,17.488850197791,15.9465759729038,13.6696704638282,14.4470807574256,12.7784223885101,10.360265135258,15.8565304156389,15.7856939512501,13.9382312594961,16.5142713741916,19.2097963588149,10.5013767981662,13.91878371757,17.485474172909,15.768779759983,13.5907392409405,16.3771922809633,15.779128527024,17.1092653351445,13.8730649251536,13.73918716893,20.5041973318685,8.45539408026285,15.8487538806618,11.7475528224539,21.7785330945333,12.3993430538622,17.7403931765317,17.2515140809258,19.1400445720607,18.874681996628,17.6356408202984,15.2655903316669,23.7008340471134,8.71718425747706,11.7090491167903,12.9920822977795,13.2479754793936,13.510332125126,18.8706855746351,20.97191285879,16.4575313415481,19.127908470405,20.871020323326,20.855986478307,21.0703933192322,19.9859502730483,15.8711268530648,13.763129109192,18.5707683181615,17.2921154855001,15.6483571166074,13.7008207079363,15.9341913112521,16.0776284309299,14.5455910170255,16.942555278512,18.8733346967943,20.6242384838183,25.2624178045221,16.4419804744954,18.8848474347425,19.5756525067224,15.3109209096235,19.4851235863208,17.6038505995619,13.0772057956063,13.5668456956351,12.2928196142977,14.5864030240976,13.6248555708189,17.8328203196514,19.1132185909389,12.9802086060503,18.2923949467335,15.9199243411192,12.9274442944022,13.3924702384114,16.1063392848198,20.4240236171533,20.5044624171539,18.5754539600399,19.1209137809012,20.0625589282253,10.3021475200827,10.8927200899454,13.7147700954166,15.4403951358624,19.313331385733,11.3370204973216,13.5517507798076,18.9536721677355,17.9269413415317,12.3642764375786,18.3335553691913,8.41713407486608,16.7275375555086,21.1784637107461,11.0492381655816,20.1417893541756,18.7119412651707,17.2369298777183,15.9073493742878,15.6855869455258,18.9375448748155,19.4120448825174,11.8252596166415
|short_description=p1@Foxj3
|short_description=p1@Foxj3
}}
}}

Revision as of 12:20, 19 April 2012

Short description:p1@Foxj3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Foxj3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000044564, ENSMUST00000106310, ENSMUST00000138845, ENSMUST00000161196, ENSMUST00000162267, NM_172699, uc008umq.1, uc008umr.1, uc008ums.1, uc008umt.1, uc008umu.1_5end
EntrezGene:Foxj3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Foxj3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.19
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.75
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E923.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E736.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F229.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F128.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.80
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E823.08
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.34
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.93
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A426.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.79
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.03
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I29.27
Ileum epithelium, pool1.CNhs13199.10252-104B96.84
Ileum epithelium, pool2.CNhs13232.10253-104C112.35
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H221.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A217.62
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I933.37
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A137.31
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C316.19
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.77
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.01
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.57
Mouse Schwann, donor1.CNhs12507.11728-123D914.99
Mouse Schwann, donor2.CNhs12573.11746-123F910.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C418.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.39
accessory axillary lymph node, adult.CNhs10475.1063-29H932.63
adrenal gland, adult.CNhs10508.49-24D718.56
adrenal gland, embryo E14.CNhs11038.406-44C511.97
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F510.40
adrenal gland, neonate N00.CNhs11191.1311-23C116.93
adrenal gland, neonate N25.CNhs11223.1377-27I313.19
amnion, adult pregnant day17.5.CNhs10488.583-22A818.79
aorta, adult.CNhs10498.46-23H121.26
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F516.82
bone (os femoris), neonate N16.CNhs11225.1525-43A614.58
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B220.79
cerebellum, neonate N30.CNhs11135.1395-42I223.04
colon, adult.CNhs10468.36-18H712.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.90
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.37
corpora quadrigemina, adult.CNhs10501.16-22A419.92
corpus striatum, adult.CNhs10487.19-21D818.76
corpus striatum, neonate N00.CNhs11226.630-43F133.80
cortex, adult.CNhs10473.12-14D522.08
cortex, neonate N30.CNhs11107.1392-42F223.27
diencephalon, adult.CNhs10482.20-12F217.25
diencephalon, neonate N30.CNhs11201.1388-42B216.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B123.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.57
epididymis, adult.CNhs10490.58-23B215.92
eyeball, adult.CNhs10484.31-12G412.84
eyeball, embryo E12.CNhs11016.345-16C617.31
eyeball, embryo E14.CNhs10521.399-16E214.02
eyeball, embryo E15.CNhs10593.426-16C912.06
eyeball, embryo E17.CNhs11023.1261-18D414.62
eyeball, neonate N00.CNhs11207.633-15C625.45
eyeball, neonate N01.CNhs11140.1532-43E718.19
eyeball, neonate N02.CNhs11205.1551-44G819.58
eyeball, neonate N16.CNhs11188.777-19A223.28
forelimb, embryo E11.CNhs10596.335-25E214.23
forelimb, embryo E12.CNhs10600.359-14H217.59
forelimb, embryo E13.CNhs10589.384-1E214.08
forelimb, embryo E14.CNhs10577.413-26A813.59
forelimb, embryo E15.CNhs11007.437-20E721.97
forelimb, embryo E17.CNhs10598.1517-43C422.98
forelimb, embryo E18.CNhs11008.1520-43B518.73
gonad, embryo E13.CNhs11044.1564-45I614.93
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.66
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E915.74
heart, embryo E12.CNhs11015.353-12F512.43
heart, embryo E13.CNhs11013.376-3I914.77
heart, embryo E14.CNhs10597.403-26D416.81
heart, embryo E15.CNhs11017.431-16C817.51
heart, embryo E16.CNhs11021.457-17C614.81
heart, embryo E17.CNhs11025.479-18E519.07
heart, embryo E18.CNhs11030.1283-20G315.56
heart, neonate N00.CNhs11213.639-21E321.02
heart, neonate N03.CNhs11221.1349-25I217.94
heart, neonate N10.CNhs11118.749-24G114.45
heart, neonate N16.CNhs11209.782-15G122.70
heart, neonate N20.CNhs11127.821-26I617.84
heart, neonate N25.CNhs11196.1351-25D312.29
heart, neonate N30.CNhs11202.1390-42D216.78
hippocampus, adult.CNhs10478.13-16E821.66
hippocampus, neonate N00.CNhs11228.627-43G126.96
intestinal mucosa, adult.CNhs10506.860-29I325.77
intestine, adult.CNhs10496.178-9A312.43
intestine, embryo E12.CNhs11019.1251-16I517.06
intestine, embryo E13.CNhs11010.381-16D519.97
intestine, embryo E15.CNhs10602.976-16D814.69
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D312.68
intestine, embryo E18.CNhs10526.1289-20F711.79
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E914.49
intestine, neonate N06.CNhs11102.688-20B816.34
intestine, neonate N07.CNhs11095.720-20F219.50
intestine, neonate N10.CNhs11098.755-23A518.33
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E315.56
intestine, neonate N30.CNhs11131.1384-42G117.92
kidney, embryo E14.CNhs10606.411-4I913.85
kidney, embryo E15.CNhs10997.434-16F815.31
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I216.29
kidney, embryo E18.CNhs11001.1288-20C717.26
kidney, neonate N00.CNhs11214.646-21G721.60
kidney, neonate N10.CNhs11206.758-6D519.92
kidney, neonate N20.CNhs11113.832-19I118.01
kidney, neonate N25.CNhs11122.1353-25F314.29
kidney, neonate N30.CNhs11203.1385-42H111.72
liver, adult pregnant day01.CNhs10466.508-5B28.89
liver, embryo E12.CNhs10601.355-15F810.68
liver, embryo E13.CNhs10524.378-3H613.37
liver, embryo E14.CNhs10594.409-16E19.44
liver, embryo E15.CNhs10520.433-16D78.32
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A311.71
liver, embryo E18.CNhs10579.499-43G49.49
liver, neonate N00.CNhs11117.641-24F411.03
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H213.40
liver, neonate N10.CNhs11115.751-24B911.86
liver, neonate N20.CNhs11220.823-25A310.10
liver, neonate N25.CNhs11198.1368-26H17.18
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B124.94
lung, embryo E12.CNhs10522.354-16G216.86
lung, embryo E14.CNhs10604.404-26F814.50
lung, embryo E15.CNhs11020.432-17C516.13
lung, embryo E16.CNhs10998.458-17B614.55
lung, embryo E17.CNhs10605.480-44A616.75
lung, embryo E18.CNhs10583.1287-20I614.28
lung, neonate N00.CNhs11224.640-42C627.12
lung, neonate N06.CNhs11212.683-20E524.75
lung, neonate N07.CNhs11111.715-19A322.15
lung, neonate N10.CNhs11219.750-23E623.60
lung, neonate N20.CNhs11109.822-18A416.88
lung, neonate N25.CNhs11119.1359-25C720.03
lung, neonate N30.CNhs11133.1394-42H217.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.60
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H212.42
medulla oblongata, adult.CNhs10477.17-12C218.78
medulla oblongata, neonate N30.CNhs11200.1396-42A316.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.66
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.88
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.14
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.81
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.83
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.18
olfactory brain, adult.CNhs10489.18-22I923.14
ovary, adult.CNhs10507.91-2I718.45
ovary, embryo E18.CNhs11040.505-44H713.71
ovary, neonate N00.CNhs11217.1299-22I423.29
oviduct, adult pregnant day01.CNhs10500.988-6G621.78
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F411.65
pancreas, embryo E15.CNhs11042.1556-45F211.49
pancreas, embryo E16.CNhs11003.460-26E512.83
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I712.91
pancreas, neonate N00.CNhs11105.645-26G914.21
pancreas, neonate N01.CNhs11138.1531-43D717.81
pancreas, neonate N02.CNhs11139.1539-43D818.89
pancreas, neonate N16.CNhs11136.787-43B616.75
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G816.68
pituitary gland, embryo E12.CNhs11018.346-16E614.40
pituitary gland, embryo E13.CNhs11009.370-44C79.70
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B916.14
pituitary gland, embryo E16.CNhs11036.449-43F619.26
pituitary gland, embryo E17.CNhs11039.1265-44F517.61
pituitary gland, neonate N00.CNhs11190.1308-22E915.83
placenta, adult pregnant day10.CNhs10472.539-13I717.60
placenta, adult pregnant day17.CNhs10464.577-18G323.51
prostate, adult.CNhs10470.859-1F812.57
skin, adult.CNhs10492.30-1C327.87
skin, neonate N00.CNhs11124.650-25G425.83
skin, neonate N03.CNhs11215.662-22H320.45
skin, neonate N06.CNhs11097.693-20I518.03
skin, neonate N10.CNhs11108.762-6C416.41
small intestine, neonate N16.CNhs11114.790-21I117.49
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G213.67
spleen, embryo E16.CNhs11035.461-43C114.45
spleen, embryo E18.CNhs11011.1271-21F212.78
spleen, neonate N10.CNhs11116.752-24D110.36
spleen, neonate N20.CNhs11112.824-19H115.86
spleen, neonate N25.CNhs11099.1354-25G315.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C916.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D319.21
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E313.92
stomach, embryo E15.CNhs10603.1252-16G817.49
stomach, embryo E16.CNhs11022.459-17D415.77
stomach, embryo E17.CNhs11006.1035-18D513.59
stomach, embryo E18.CNhs10999.1286-20C616.38
stomach, neonate N03.CNhs11193.1340-24B815.78
stomach, neonate N07.CNhs11210.718-18A917.11
stomach, neonate N25.CNhs11104.1355-25E413.87
stomach, neonate N30.CNhs11134.1386-42I113.74
submandibular gland, adult.CNhs10469.59-29C120.50
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F515.85
testis, embryo E15.CNhs11034.443-27C511.75
testis, embryo E16.CNhs11033.470-26G521.78
testis, embryo E17.CNhs11029.486-18I512.40
testis, embryo E18.CNhs11027.503-18G517.74
testis, neonate N00.CNhs11189.1300-22B717.25
testis, neonate N07.CNhs11222.726-26I419.14
testis, neonate N10.CNhs11204.763-44D918.87
testis, neonate N20.CNhs11110.839-18H317.64
testis, neonate N30.CNhs11130.1391-42E215.27
thymus, adult.CNhs10471.38-12B523.70
thymus, embryo E14.CNhs11041.402-44I48.72
thymus, embryo E15.CNhs11005.430-45I211.71
thymus, embryo E16.CNhs11002.456-26C512.99
thymus, embryo E17.CNhs10581.478-18C113.25
thymus, embryo E18.CNhs10595.1273-19G413.51
thymus, neonate N02.CNhs11181.1541-43F818.87
thymus, neonate N03.CNhs11137.2104-43C720.97
thymus, neonate N06.CNhs11197.681-26C416.46
thymus, neonate N07.CNhs11211.713-19D319.13
thymus, neonate N10.CNhs11194.748-24E420.87
thymus, neonate N20.CNhs11186.820-7A220.86
thymus, neonate N25.CNhs11125.1362-25G721.07
thymus, neonate N30.CNhs11132.1393-42G219.99
tongue, adult.CNhs10499.32-1B415.87
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F718.57
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.29
urinary bladder, adult.CNhs10481.879-12E415.65
uterus, adult pregnant day19.CNhs10497.590-15F513.70
uterus, adult.CNhs10509.92-27E515.93
vagina, adult.CNhs10502.89-27D516.08
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I813.08
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H212.29
whole body, embryo E14.5.CNhs10578.420-27D214.59
whole body, embryo E14.CNhs10519.395-14B113.62
whole body, embryo E16.CNhs10514.453-14F217.83
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.92
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.93
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.11
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.06
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.31
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.14
whole body, embryo E17.5.CNhs10513.490-9F918.71
whole body, embryo E17.CNhs10517.475-3I517.24
whole body, embryo E18.CNhs10516.493-3B315.91
whole body, neonate N00.CNhs10525.657-19C215.69
whole body, neonate N01.CNhs10576.659-23C618.94
whole body, neonate N06.CNhs10515.692-21D119.41
whole body, neonate N10.CNhs10518.761-6B411.83





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:119212257..119212303,%2B&oldid=1066698"