UBERON:0003099: Difference between revisions
From FANTOM5_SSTAR
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|id=UBERON:0003099
|name=cranial neural crest
|namespace=
|def="The cranial neural crest arises in the anterior and populates the face and the pharyngeal arches g...") |
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Revision as of 17:17, 15 June 2012
| Name: | cranial neural crest | ||
|---|---|---|---|
| Definition: | "The cranial neural crest arises in the anterior and populates the face and the pharyngeal arches giving rise to bones, cartilage, nerves and connective tissue [Wikipedia]." [Wikipedia:Cranial_neural_crest, ZFA:0001194, ZFIN:curator] | ||
| Xrefs: |
| ||
| Synonyms: |
"cephalic neural crest" RELATED [EMAPA:16091] "head crest" RELATED [] "head neural crest" RELATED [] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:XAO_0001001-ZFA_0001194 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000479(tissue),UBERON:0004121(ectoderm-derived structure),UBERON:0005291(embryonic tissue) |
|---|---|
| part_of: | UBERON:0002342(neural crest) |
Children
| is a: | UBERON:0003849 (mesencephalic neural crest),UBERON:0003852 (rhombencephalon neural crest),UBERON:0005565 (facio-acoustic neural crest) |
|---|---|
| develops from: | UBERON:0007213 (mesenchyme derived from head neural crest) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003099 (cranial neural crest), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_46a1de3b034d8ac104db806730ffa12b | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_46a1de3b034d8ac104db806730ffa12b | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_e90aa0e6f4d535799c52baae3511d780 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_e90aa0e6f4d535799c52baae3511d780 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_e90aa0e6f4d535799c52baae3511d780 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_e90aa0e6f4d535799c52baae3511d780 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_e90aa0e6f4d535799c52baae3511d780 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_e90aa0e6f4d535799c52baae3511d780 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_e90aa0e6f4d535799c52baae3511d780 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_e90aa0e6f4d535799c52baae3511d780 | p@chr8:57353655..57353662, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_ad74e28132eca1880239785893f812e8 | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_ad74e28132eca1880239785893f812e8 | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_ad74e28132eca1880239785893f812e8 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_ad74e28132eca1880239785893f812e8 | p@chr5:75912402..75912418, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_4f4681b0cb8f7ada521ad0508d74fe47 | p@chr4:151505582..151505614, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_4f4681b0cb8f7ada521ad0508d74fe47 | p@chr4:151505582..151505614, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_ffacbad1e0d41d92df8307a21fbfcc20 | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_ffacbad1e0d41d92df8307a21fbfcc20 | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_ffacbad1e0d41d92df8307a21fbfcc20 | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_ffacbad1e0d41d92df8307a21fbfcc20 | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_ffacbad1e0d41d92df8307a21fbfcc20 | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_ffacbad1e0d41d92df8307a21fbfcc20 | p17@RSRC1 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_cc47877f38ef60ef5466e278f7e1ef23 | p@chr8:57802672..57802682, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_cc47877f38ef60ef5466e278f7e1ef23 | p@chr8:57802672..57802682, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_6102483e4ed8d64c9633e27dda7e2e1e | p1@AK123925 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_6102483e4ed8d64c9633e27dda7e2e1e | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_6102483e4ed8d64c9633e27dda7e2e1e | p1@AK123925 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_6102483e4ed8d64c9633e27dda7e2e1e | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_6102483e4ed8d64c9633e27dda7e2e1e | p7@ALX1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_6102483e4ed8d64c9633e27dda7e2e1e | p7@ALX1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_de1216d24d90d9214dab7c4c1e9a2998 | p23@FLT1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_de1216d24d90d9214dab7c4c1e9a2998 | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_de1216d24d90d9214dab7c4c1e9a2998 | p23@FLT1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_de1216d24d90d9214dab7c4c1e9a2998 | p@chr2:33519090..33519092, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_c799d52fd5ae22eee0111a08d60b1f2f | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_c799d52fd5ae22eee0111a08d60b1f2f | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_c799d52fd5ae22eee0111a08d60b1f2f | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_c799d52fd5ae22eee0111a08d60b1f2f | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_c799d52fd5ae22eee0111a08d60b1f2f | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_c799d52fd5ae22eee0111a08d60b1f2f | p@chr8:57353779..57353790, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_b3472fc033383b7552f9fd817f6f9ad0 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_b3472fc033383b7552f9fd817f6f9ad0 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_b3472fc033383b7552f9fd817f6f9ad0 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_b3472fc033383b7552f9fd817f6f9ad0 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_b3472fc033383b7552f9fd817f6f9ad0 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_b3472fc033383b7552f9fd817f6f9ad0 | p8@LHX8 |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_84a2235c76e29c17e2130c10f1c42378 | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_84a2235c76e29c17e2130c10f1c42378 | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_84a2235c76e29c17e2130c10f1c42378 | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_84a2235c76e29c17e2130c10f1c42378 | p@chr5:75912831..75912842, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_f9a9e963b3adcb2e502d9e9b3abe88db | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_f9a9e963b3adcb2e502d9e9b3abe88db | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_f9a9e963b3adcb2e502d9e9b3abe88db | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_f9a9e963b3adcb2e502d9e9b3abe88db | p@chr6:46190219..46190230, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_75e7e95384083b97dbd96e9abab4fb00 | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_75e7e95384083b97dbd96e9abab4fb00 | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_75e7e95384083b97dbd96e9abab4fb00 | p5@PENK |
| 1.84e-34 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_75e7e95384083b97dbd96e9abab4fb00 | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_75e7e95384083b97dbd96e9abab4fb00 | p5@PENK |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_75e7e95384083b97dbd96e9abab4fb00 | p4@CPZ |
| 2.58e-34 | FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_79fa4f6f580d0c7a62de77c403004d4b | p9@SIX1 |
| 2.58e-34 | FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_79fa4f6f580d0c7a62de77c403004d4b | p9@SIX1 |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_e1455b68b6d09f1837fe4b81a02a336e | p@chr6:134327986..134327991, - |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_e1455b68b6d09f1837fe4b81a02a336e | p@chr6:134327986..134327991, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_7124d92e1e06c1955ff6f71b108ecce9 | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_7124d92e1e06c1955ff6f71b108ecce9 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_7124d92e1e06c1955ff6f71b108ecce9 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_7124d92e1e06c1955ff6f71b108ecce9 | p@chr13:58291223..58291226, + |
| 9.85e-34 | FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_055b758cfbded20170e848b851c73ed2 | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_055b758cfbded20170e848b851c73ed2 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_055b758cfbded20170e848b851c73ed2 | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_055b758cfbded20170e848b851c73ed2 | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_055b758cfbded20170e848b851c73ed2 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_055b758cfbded20170e848b851c73ed2 | p@chr5:19721484..19721507, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_297640b28d1bcb0c639cdba3f06f7c09 | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_297640b28d1bcb0c639cdba3f06f7c09 | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_297640b28d1bcb0c639cdba3f06f7c09 | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_297640b28d1bcb0c639cdba3f06f7c09 | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_297640b28d1bcb0c639cdba3f06f7c09 | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_297640b28d1bcb0c639cdba3f06f7c09 | p@chr8:57354360..57354367, + |
| 9.99e-30 | FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_109e9a8648a226eca7d99f4071cbff4e | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_109e9a8648a226eca7d99f4071cbff4e | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_109e9a8648a226eca7d99f4071cbff4e | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_109e9a8648a226eca7d99f4071cbff4e | p7@SHOX2 |
| 1.33e-29 | FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_e50fe49600b3c3855bdce5efd3c8a3fd | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_e50fe49600b3c3855bdce5efd3c8a3fd | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_e50fe49600b3c3855bdce5efd3c8a3fd | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_e50fe49600b3c3855bdce5efd3c8a3fd | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_e50fe49600b3c3855bdce5efd3c8a3fd | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_e50fe49600b3c3855bdce5efd3c8a3fd | p@chr22:28193943..28193956, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_a2dc04693305706e2bcacfbd49930e86 | p@chr1:21904551..21904569, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_a2dc04693305706e2bcacfbd49930e86 | p@chr1:21904551..21904569, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_ca9f4b8669898df264db249505fd46b3 | p18@MEF2D |
| 3.16e-29 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_ca9f4b8669898df264db249505fd46b3 | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_ca9f4b8669898df264db249505fd46b3 | p18@MEF2D |
| 3.16e-29 | FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_ca9f4b8669898df264db249505fd46b3 | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_ca9f4b8669898df264db249505fd46b3 | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_ca9f4b8669898df264db249505fd46b3 | p@chr8:57359975..57359992, - |
| 4.2e-29 | FFCP PHASE2:Hg19::chr15:52606315..52606320,-#_82b2166c7c3fe31a05e36be88246e87c | p@chr15:52606315..52606320, - |
| 4.2e-29 | FFCP PHASE2:Hg19::chr10:28033565..28033575,-#_82b2166c7c3fe31a05e36be88246e87c | p@chr10:28033565..28033575, - |
