Personal tools

CL:0000584: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{CL |id=CL:0000584 |name=enterocyte |namespace=cell |def="An epithelial cell that has its apical plasma membrane folded into microvilli to provide ample surface for the a...")
 
No edit summary
Line 20: Line 20:
|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:38, 15 June 2012

Name:enterocyte
Namespace:cell
Definition:"An epithelial cell that has its apical plasma membrane folded into microvilli to provide ample surface for the absorption of nutrients from the intestinal lumen." [SANBI:mhl]
Xrefs:
links:

BTO:0000398

FMA:62122


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000239(brush border epithelial cell),CL:0000677(gut absorptive cell),CL:0002563(intestinal epithelial cell)



Children


is a:FF:0011445 (CD326-positive+ enterocyte isolated from mice- treated with RANKL- day03)
derives from:FF:0011113 (mouse CD326-positive enterocyte isolated from mice- treated with RANKL- day03 sample),FF:0011149 (mouse CD326-positive enterocyte sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 11848-124I3 (CD326+ enterocyte, pool1)
  • 11849-124I4 (CD326+ enterocyte, pool2)
  • 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
  • 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)

Mouse (Mus musculus)

  • 11848-124I3 (CD326+ enterocyte, pool1)
  • 11849-124I4 (CD326+ enterocyte, pool2)
  • 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
  • 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000584 (enterocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.74e-65FFCP PHASE1:Mm9::chr9:50547790..50547793,+#_00d87bde04e38aeea45a494816ebdc5fp@chr9:50547790..50547793, +
3.74e-65FFCP PHASE2:Mm9::chr9:50547790..50547793,+#_00d87bde04e38aeea45a494816ebdc5fp@chr9:50547790..50547793, +
6.21e-65FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_f5e505321c529b43174b193c0425a054p@chr8:122335239..122335244, +
6.21e-65FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_f5e505321c529b43174b193c0425a054p@chr8:122335239..122335244, +
2.15e-58FFCP PHASE1:Mm9::chr4:141179191..141179200,+#_7599bca2bdec0c9947fc5fe7488e2066p@chr4:141179191..141179200, +
2.15e-58FFCP PHASE2:Mm9::chr12:79850576..79850587,-#_7599bca2bdec0c9947fc5fe7488e2066p@chr12:79850576..79850587, -
2.15e-58FFCP PHASE1:Mm9::chr12:79850576..79850587,-#_7599bca2bdec0c9947fc5fe7488e2066p@chr12:79850576..79850587, -
2.15e-58FFCP PHASE2:Mm9::chr4:141179191..141179200,+#_7599bca2bdec0c9947fc5fe7488e2066p@chr4:141179191..141179200, +
3.91e-58FFCP PHASE2:Mm9::chr15:84503292..84503296,+#_99ba64c05550b23fe204ed28b314a4f4p@chr15:84503292..84503296, +
3.91e-58FFCP PHASE2:Mm9::chr12:40668168..40668171,+#_99ba64c05550b23fe204ed28b314a4f4p@chr12:40668168..40668171, +
3.91e-58FFCP PHASE1:Mm9::chr12:40668168..40668171,+#_99ba64c05550b23fe204ed28b314a4f4p@chr12:40668168..40668171, +
3.91e-58FFCP PHASE1:Mm9::chr15:84503292..84503296,+#_99ba64c05550b23fe204ed28b314a4f4p@chr15:84503292..84503296, +
1.25e-52FFCP PHASE1:Mm9::chr2:33323607..33323635,+#_e02e474651e8b2e1e2ae22b1372f91d2p@chr2:33323607..33323635, +
1.25e-52FFCP PHASE2:Mm9::chr2:33323607..33323635,+#_e02e474651e8b2e1e2ae22b1372f91d2p@chr2:33323607..33323635, +
2.53e-52FFCP PHASE2:Mm9::chr8:107365938..107365944,+#_ba0e910ddcdf553caf8b01cb7c583753p@chr8:107365938..107365944, +
2.53e-52FFCP PHASE1:Mm9::chr8:107365938..107365944,+#_ba0e910ddcdf553caf8b01cb7c583753p@chr8:107365938..107365944, +
3.23e-52FFCP PHASE1:Mm9::chr3:104598813..104598825,+#_d235f39e246f0cd3226ed5412671c69ap@chr3:104598813..104598825, +
3.23e-52FFCP PHASE2:Mm9::chr3:104598813..104598825,+#_d235f39e246f0cd3226ed5412671c69ap@chr3:104598813..104598825, +
4.11e-52FFCP PHASE2:Mm9::chr8:125098705..125098710,+#_55e61a0b781415b46892ad3f2c5075fcp@chr8:125098705..125098710, +
4.11e-52FFCP PHASE1:Mm9::chr8:125098705..125098710,+#_55e61a0b781415b46892ad3f2c5075fcp@chr8:125098705..125098710, +
5.18e-52FFCP PHASE2:Mm9::chr5:135465906..135465912,+#_23903cd002fc42ef2b39d7affb54f107p@chr5:135465906..135465912, +
5.18e-52FFCP PHASE1:Mm9::chr5:135465906..135465912,+#_23903cd002fc42ef2b39d7affb54f107p@chr5:135465906..135465912, +
2.22e-51FFCP PHASE2:Mm9::chr9:84127758..84127761,+#_90fec5dff022511987959fae7ec4d0dbp@chr9:84127758..84127761, +
2.22e-51FFCP PHASE1:Mm9::chr9:84127758..84127761,+#_90fec5dff022511987959fae7ec4d0dbp@chr9:84127758..84127761, +
8.37e-49FFCP PHASE2:Mm9::chr5:64219055..64219063,-#_901fcc5ef9dee3a9da891cdb79a82cebp@chr5:64219055..64219063, -
8.37e-49FFCP PHASE1:Mm9::chr5:64219055..64219063,-#_901fcc5ef9dee3a9da891cdb79a82cebp@chr5:64219055..64219063, -
2.57e-48FFCP PHASE2:Mm9::chr15:82182200..82182204,+#_5ab47d1986b9ee5092177b7c5ab5b6d5p@chr15:82182200..82182204, +
2.57e-48FFCP PHASE1:Mm9::chr15:82182200..82182204,+#_5ab47d1986b9ee5092177b7c5ab5b6d5p@chr15:82182200..82182204, +
4.49e-48FFCP PHASE1:Mm9::chr9:46051244..46051255,+#_ecf79f1a987022893055ac9dc976d842p@chr9:46051244..46051255, +
4.49e-48FFCP PHASE2:Mm9::chr9:46051244..46051255,+#_ecf79f1a987022893055ac9dc976d842p@chr9:46051244..46051255, +
5.4e-48FFCP PHASE1:Mm9::chr1:156931282..156931291,-#_eed8fb7a3342b979db77dd22ccfc4282p@chr1:156931282..156931291, -
5.4e-48FFCP PHASE2:Mm9::chr1:156931282..156931291,-#_eed8fb7a3342b979db77dd22ccfc4282p@chr1:156931282..156931291, -
6.51e-48FFCP PHASE2:Mm9::chr17:57201412..57201418,-#_fa95084cf2bad19e8b35a5c4e3677065p@chr17:57201412..57201418, -
6.51e-48FFCP PHASE1:Mm9::chr17:57201412..57201418,-#_fa95084cf2bad19e8b35a5c4e3677065p@chr17:57201412..57201418, -
1.37e-47FFCP PHASE1:Mm9::chr17:46693370..46693378,+#_58d4d0e064f67d775de2bd0f30180b33p@chr17:46693370..46693378, +
1.37e-47FFCP PHASE2:Mm9::chr17:46693370..46693378,+#_58d4d0e064f67d775de2bd0f30180b33p@chr17:46693370..46693378, +
6.34e-47FFCP PHASE2:Mm9::chr6:137486449..137486455,+#_5752ac64c9ae5c8b28c47f91d9f9fdf8p@chr6:137486449..137486455, +
6.34e-47FFCP PHASE1:Mm9::chr4:142835790..142835793,-#_5752ac64c9ae5c8b28c47f91d9f9fdf8p@chr4:142835790..142835793, -
6.34e-47FFCP PHASE2:Mm9::chr1:13659869..13659873,-#_5752ac64c9ae5c8b28c47f91d9f9fdf8p@chr1:13659869..13659873, -
6.34e-47FFCP PHASE2:Mm9::chr4:142835790..142835793,-#_5752ac64c9ae5c8b28c47f91d9f9fdf8p@chr4:142835790..142835793, -
6.34e-47FFCP PHASE1:Mm9::chr2:76337146..76337155,+#_5752ac64c9ae5c8b28c47f91d9f9fdf8p5@Osbpl6
6.34e-47FFCP PHASE1:Mm9::chr1:13659869..13659873,-#_5752ac64c9ae5c8b28c47f91d9f9fdf8p@chr1:13659869..13659873, -
6.34e-47FFCP PHASE1:Mm9::chr6:137486449..137486455,+#_5752ac64c9ae5c8b28c47f91d9f9fdf8p@chr6:137486449..137486455, +
6.34e-47FFCP PHASE1:Mm9::chr14:26286217..26286232,+#_5752ac64c9ae5c8b28c47f91d9f9fdf8p@chr14:26286217..26286232, +
6.34e-47FFCP PHASE2:Mm9::chr2:76337146..76337155,+#_5752ac64c9ae5c8b28c47f91d9f9fdf8p5@Osbpl6
6.34e-47FFCP PHASE2:Mm9::chr2:24234641..24234644,+#_5752ac64c9ae5c8b28c47f91d9f9fdf8p@chr2:24234641..24234644, +
6.34e-47FFCP PHASE2:Mm9::chr14:26286217..26286232,+#_5752ac64c9ae5c8b28c47f91d9f9fdf8p@chr14:26286217..26286232, +
6.34e-47FFCP PHASE1:Mm9::chr2:24234641..24234644,+#_5752ac64c9ae5c8b28c47f91d9f9fdf8p@chr2:24234641..24234644, +
1.09e-46FFCP PHASE2:Mm9::chr5:136252496..136252506,+#_3a5401972feea66ca8a10212d973a18ap@chr5:136252496..136252506, +
1.09e-46FFCP PHASE1:Mm9::chr5:136252496..136252506,+#_3a5401972feea66ca8a10212d973a18ap@chr5:136252496..136252506, +
6.32e-46FFCP PHASE1:Mm9::chr2:31008686..31008692,-#_7b6b087c8d9519fb342ad57f6dd87ed6p@chr2:31008686..31008692, -
6.32e-46FFCP PHASE1:Mm9::chr19:11893526..11893532,+#_7b6b087c8d9519fb342ad57f6dd87ed6p@chr19:11893526..11893532, +
6.32e-46FFCP PHASE2:Mm9::chr19:11893526..11893532,+#_7b6b087c8d9519fb342ad57f6dd87ed6p@chr19:11893526..11893532, +
6.32e-46FFCP PHASE2:Mm9::chr2:31008686..31008692,-#_7b6b087c8d9519fb342ad57f6dd87ed6p@chr2:31008686..31008692, -
7.81e-46FFCP PHASE1:Mm9::chr10:79561288..79561291,-#_75e8a581beb65ff13f67dbf9b040fd10p@chr10:79561288..79561291, -
7.81e-46FFCP PHASE2:Mm9::chr10:79561288..79561291,-#_75e8a581beb65ff13f67dbf9b040fd10p@chr10:79561288..79561291, -
1.47e-45FFCP PHASE1:Mm9::chr3:35620179..35620188,+#_9a14c44b1f66ce8272a26a15ddcaa885p@chr3:35620179..35620188, +
1.47e-45FFCP PHASE2:Mm9::chr3:35620179..35620188,+#_9a14c44b1f66ce8272a26a15ddcaa885p@chr3:35620179..35620188, +
1.2e-44FFCP PHASE1:Mm9::chr18:66636209..66636215,-#_6ca49222d3235f5c33be1135adfab59fp@chr18:66636209..66636215, -
1.2e-44FFCP PHASE1:Mm9::chr15:103135874..103135880,+#_6ca49222d3235f5c33be1135adfab59fp@chr15:103135874..103135880, +
1.2e-44FFCP PHASE2:Mm9::chr18:66636209..66636215,-#_6ca49222d3235f5c33be1135adfab59fp@chr18:66636209..66636215, -
1.2e-44FFCP PHASE2:Mm9::chr15:103135874..103135880,+#_6ca49222d3235f5c33be1135adfab59fp@chr15:103135874..103135880, +
1.42e-44FFCP PHASE2:Mm9::chr16:78268076..78268083,-#_82f54b21f37d55f3d28c6e5974217b04p@chr16:78268076..78268083, -
1.42e-44FFCP PHASE1:Mm9::chr10:80565428..80565433,+#_82f54b21f37d55f3d28c6e5974217b04p@chr10:80565428..80565433, +
1.42e-44FFCP PHASE1:Mm9::chr16:78268076..78268083,-#_82f54b21f37d55f3d28c6e5974217b04p@chr16:78268076..78268083, -
1.42e-44FFCP PHASE2:Mm9::chr10:80565428..80565433,+#_82f54b21f37d55f3d28c6e5974217b04p@chr10:80565428..80565433, +
5.38e-44FFCP PHASE1:Mm9::chr1:132748706..132748715,+#_5a05362a0af96b9fd8f721047940c95ap@chr1:132748706..132748715, +
5.38e-44FFCP PHASE2:Mm9::chr1:132748706..132748715,+#_5a05362a0af96b9fd8f721047940c95ap@chr1:132748706..132748715, +
5.58e-44FFCP PHASE2:Mm9::chr2:143738263..143738267,+#_89482daa7d8263737275cc19565ac07fp@chr2:143738263..143738267, +
5.58e-44FFCP PHASE1:Mm9::chr2:143738263..143738267,+#_89482daa7d8263737275cc19565ac07fp@chr2:143738263..143738267, +
7.05e-43FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_c9c210a27fb18a07fa762c3b8724ed49p@chr3:122215917..122215967, -
7.05e-43FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_c9c210a27fb18a07fa762c3b8724ed49p@chr3:122215917..122215967, -
2.1e-41FFCP PHASE1:Mm9::chr12:111682896..111682907,+#_840800bf80dcc17bf0bfeb8aa006162fp@chr12:111682896..111682907, +
2.1e-41FFCP PHASE2:Mm9::chr12:111682896..111682907,+#_840800bf80dcc17bf0bfeb8aa006162fp@chr12:111682896..111682907, +
2.46e-41FFCP PHASE1:Mm9::chr16:32380022..32380027,+#_81b1c93fef46dae7a34bb5b735704b1dp@chr16:32380022..32380027, +
2.46e-41FFCP PHASE2:Mm9::chr16:32380022..32380027,+#_81b1c93fef46dae7a34bb5b735704b1dp@chr16:32380022..32380027, +
2.88e-41FFCP PHASE1:Mm9::chr7:96869911..96869915,+#_1a5b533bf41e45e2d301f8c77ddb3f0dp@chr7:96869911..96869915, +
2.88e-41FFCP PHASE2:Mm9::chr7:96869911..96869915,+#_1a5b533bf41e45e2d301f8c77ddb3f0dp@chr7:96869911..96869915, +
3.41e-41FFCP PHASE2:Mm9::chr11:120478620..120478628,+#_19f25265dec35424d75dda130f794c10p@chr11:120478620..120478628, +
3.41e-41FFCP PHASE1:Mm9::chr11:120478620..120478628,+#_19f25265dec35424d75dda130f794c10p@chr11:120478620..120478628, +
4.98e-41FFCP PHASE2:Mm9::chr5:66443992..66444014,-#_7ae684e8ae977d0bb3c6a6a7785d3455p@chr5:66443992..66444014, -
4.98e-41FFCP PHASE1:Mm9::chr5:66443992..66444014,-#_7ae684e8ae977d0bb3c6a6a7785d3455p@chr5:66443992..66444014, -
5.43e-41FFCP PHASE2:Mm9::chr7:4101973..4101978,-#_17f249a0e28829e70a68d26333b2d716p4@Leng9
5.43e-41FFCP PHASE1:Mm9::chr7:4101973..4101978,-#_17f249a0e28829e70a68d26333b2d716p4@Leng9
6.02e-41FFCP PHASE1:Mm9::chr9:95715941..95715947,+#_8f81ece6879751946c46e0452d7ac8d7p@chr9:95715941..95715947, +
6.02e-41FFCP PHASE2:Mm9::chr9:95715941..95715947,+#_8f81ece6879751946c46e0452d7ac8d7p@chr9:95715941..95715947, +
7.27e-41FFCP PHASE2:Mm9::chr2:75543070..75543079,-#_9d1c12b0224bbd9ea8fa7c33f6b19356p7@Nfe2l2
7.27e-41FFCP PHASE1:Mm9::chr2:75543070..75543079,-#_9d1c12b0224bbd9ea8fa7c33f6b19356p7@Nfe2l2
1.28e-40FFCP PHASE2:Mm9::chr5:29704314..29704350,+#_7e47943394663e080269058819751e5ap@chr5:29704314..29704350, +
1.28e-40FFCP PHASE1:Mm9::chr5:29704314..29704350,+#_7e47943394663e080269058819751e5ap@chr5:29704314..29704350, +
1.54e-40FFCP PHASE1:Mm9::chr2:38781010..38781017,+#_3377216a110b4100d3fa1209ab39fff6p@chr2:38781010..38781017, +
1.54e-40FFCP PHASE2:Mm9::chr2:38781010..38781017,+#_3377216a110b4100d3fa1209ab39fff6p@chr2:38781010..38781017, +
1.63e-40FFCP PHASE2:Mm9::chr17:71337821..71337827,+#_3b84524e745dbd675222ed8bda5358bbp@chr17:71337821..71337827, +
1.63e-40FFCP PHASE1:Mm9::chr17:71337821..71337827,+#_3b84524e745dbd675222ed8bda5358bbp@chr17:71337821..71337827, +
2.24e-40FFCP PHASE1:Mm9::chr1:127346940..127346945,-#_7714eddb243d1338645017f1be3fa357p@chr1:127346940..127346945, -
2.24e-40FFCP PHASE2:Mm9::chr1:127346940..127346945,-#_7714eddb243d1338645017f1be3fa357p@chr1:127346940..127346945, -
3.57e-40FFCP PHASE1:Mm9::chr5:91570078..91570084,+#_e4ae00e497ff0d49e2c2f721d7de58a3p@chr5:91570078..91570084, +
3.57e-40FFCP PHASE2:Mm9::chr5:91570078..91570084,+#_e4ae00e497ff0d49e2c2f721d7de58a3p@chr5:91570078..91570084, +
5.71e-40FFCP PHASE2:Mm9::chr7:4101821..4101832,-#_3f0e5fcfea5f1c54acaf0ab5add4e6d7p5@Leng9
5.71e-40FFCP PHASE1:Mm9::chr7:4101821..4101832,-#_3f0e5fcfea5f1c54acaf0ab5add4e6d7p5@Leng9

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000584&oldid=1833654"