UBERON:0005399: Difference between revisions
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|obo_creation_date= | |obo_creation_date= | ||
|subset=organ_slim | |subset=organ_slim | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:06, 26 June 2012
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003937(sex gland) |
|---|
Children
| is a: | UBERON:0006868 (seminal fluid secreting gland),UBERON:0010147 (male accessory sex gland) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10022-101D4 (prostate, adult, pool1)
- 10092-102C2
- 10201-103F3 (seminal vesicle, adult)
- 10439-106E7 (prostate cancer cell line:PC-3)
- 10490-107B4 (prostate cancer cell line:DU145)
- 10491-107B5
- 11253-116F2 (Prostate Epithelial Cells (polarized), donor1)
- 11254-116F3 (Prostate Stromal Cells, donor1)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11331-117E8 (Prostate Epithelial Cells, donor2)
... further results Mouse (Mus musculus)
- 10022-101D4 (prostate, adult, pool1)
- 10092-102C2
- 10201-103F3 (seminal vesicle, adult)
- 10439-106E7 (prostate cancer cell line:PC-3)
- 10490-107B4 (prostate cancer cell line:DU145)
- 10491-107B5
- 11253-116F2 (Prostate Epithelial Cells (polarized), donor1)
- 11254-116F3 (Prostate Stromal Cells, donor1)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11331-117E8 (Prostate Epithelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005399 (male reproductive gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:124520338..124520341,+#_9f918517178583dbd25b2f87577d7bd0 | p5@C1rb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:122970964..122970995,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122970964..122970995, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:122949581..122949586,+#_9f918517178583dbd25b2f87577d7bd0 | p4@Tgm4 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42542355..42542361,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42542355..42542361, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:53713590..53713610,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr10:53713590..53713610, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:27934517..27934519,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr17:27934517..27934519, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28922127..28922139,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28922127..28922139, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:41580319..41580330,+#_9f918517178583dbd25b2f87577d7bd0 | p9@Dnaic1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:57794383..57794394,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:57794383..57794394, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28927502..28927529,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28927502..28927529, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:164101774..164101787,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:164101774..164101787, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:53713615..53713626,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr10:53713615..53713626, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:164160012..164160019,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:164160012..164160019, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:42536870..42536884,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42536870..42536884, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:94930111..94930121,+#_9f918517178583dbd25b2f87577d7bd0 | p5@Tmod4 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28932044..28932051,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28932044..28932051, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:103012501..103012510,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:103012501..103012510, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28942800..28942808,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28942800..28942808, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:164158520..164158525,+#_9f918517178583dbd25b2f87577d7bd0 | p5@Svs5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28940253..28940263,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28940253..28940263, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:33240968..33241002,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr5:33240968..33241002, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:14661555..14661583,-#_9f918517178583dbd25b2f87577d7bd0 | p2@uc008iko.1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42536870..42536884,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42536870..42536884, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:80142412..80142415,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:80142412..80142415, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28916507..28916522,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28916507..28916522, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:186196122..186196127,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr1:186196122..186196127, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:80158173..80158181,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:80158173..80158181, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:86673943..86673972,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr11:86673943..86673972, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28925200..28925211,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28925200..28925211, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:122976310..122976316,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122976310..122976316, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:44413083..44413113,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr18:44413083..44413113, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:95769561..95769572,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr10:95769561..95769572, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:42536268..42536279,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42536268..42536279, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:12166400..12166446,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr17:12166400..12166446, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28927432..28927441,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28927432..28927441, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:40762574..40762606,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:40762574..40762606, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28900367..28900381,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28900367..28900381, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:55821487..55821490,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr1:55821487..55821490, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:122965760..122965771,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122965760..122965771, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:87443461..87443465,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr16:87443461..87443465, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28944445..28944450,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28944445..28944450, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28914161..28914201,+#_9f918517178583dbd25b2f87577d7bd0 | p4@9530053A07Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:88222368..88222373,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:88222368..88222373, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:42535859..42535880,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42535859..42535880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:86673943..86673972,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr11:86673943..86673972, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28925146..28925155,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28925146..28925155, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:73951886..73951889,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr1:73951886..73951889, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28939595..28939598,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28939595..28939598, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:36300880..36300894,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:36300880..36300894, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:120000741..120000746,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr11:120000741..120000746, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:42544112..42544123,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42544112..42544123, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:122955651..122955667,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122955651..122955667, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:41338789..41338794,-#_9f918517178583dbd25b2f87577d7bd0 | p8@Tm9sf3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42536199..42536211,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42536199..42536211, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:40762574..40762606,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:40762574..40762606, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28922123..28922130,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28922123..28922130, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:105606509..105606520,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr3:105606509..105606520, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:122976591..122976643,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122976591..122976643, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:110122608..110122621,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr12:110122608..110122621, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:122960444..122960465,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122960444..122960465, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42544112..42544123,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42544112..42544123, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:118608760..118608766,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:118608760..118608766, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:54955334..54955338,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:54955334..54955338, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28922605..28922615,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28922605..28922615, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:120000750..120000762,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr11:120000750..120000762, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28931830..28931852,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28931830..28931852, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:11354120..11354127,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr19:11354120..11354127, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:42540847..42540852,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42540847..42540852, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:36341385..36341396,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:36341385..36341396, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42535803..42535831,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42535803..42535831, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:79852528..79852563,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr1:79852528..79852563, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28916507..28916522,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28916507..28916522, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28942567..28942583,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28942567..28942583, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42540847..42540852,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42540847..42540852, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:80142501..80142512,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:80142501..80142512, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:40222667..40222711,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr10:40222667..40222711, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:32075708..32075715,+#_9f918517178583dbd25b2f87577d7bd0 | p6@Slc26a3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28916770..28916787,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28916770..28916787, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:119352000..119352016,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:119352000..119352016, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28927281..28927289,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28927281..28927289, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:103891536..103891547,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr12:103891536..103891547, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:22867311..22867335,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr8:22867311..22867335, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28928876..28928883,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28928876..28928883, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:11354181..11354186,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr19:11354181..11354186, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:56985658..56985672,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr14:56985658..56985672, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:65665144..65665191,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr18:65665144..65665191, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:110113780..110113790,-#_9f918517178583dbd25b2f87577d7bd0 | p13@Wars, p8@LOC640248 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28942603..28942613,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28942603..28942613, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28914161..28914201,+#_9f918517178583dbd25b2f87577d7bd0 | p4@9530053A07Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28939659..28939670,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28939659..28939670, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:42547711..42547719,-#_9f918517178583dbd25b2f87577d7bd0 | p6@Fam115e |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:122970890..122970897,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122970890..122970897, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:19766363..19766365,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr17:19766363..19766365, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28922537..28922558,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28922537..28922558, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:116675921..116675953,-#_9f918517178583dbd25b2f87577d7bd0 | p5@9530003J23Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28947883..28947894,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28947883..28947894, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28914499..28914509,+#_9f918517178583dbd25b2f87577d7bd0 | p6@9530053A07Rik |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28924932..28924940,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28924932..28924940, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:122970933..122970940,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122970933..122970940, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:83050951..83050986,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr15:83050951..83050986, + |
