UBERON:0007375: Difference between revisions
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{{UBERON | {{UBERON | ||
|id=UBERON:0007375 | |id=UBERON:0007375 | ||
|name=palate | |name=primary or secondary palate | ||
|namespace= | |namespace= | ||
|def= | |def="Either the primary or secondary palate" [UBERON:cjm] | ||
|xref=AAO:0010535 | |xref=AAO:0010535 | ||
|is_a=UBERON:0000061 | |is_a=UBERON:0000061 | ||
|synonym= | |synonym="palate" EXACT [];;"palatum" EXACT INCONSISTENT [] | ||
|comment= | |comment= | ||
|alt_id= | |alt_id= | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset=grouping_class | |subset=grouping_class | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Roof of the mouth lined with ciliated epithelium.[AAO]" xsd:string | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:08, 26 June 2012
| Name: | primary or secondary palate | ||
|---|---|---|---|
| Definition: | "Either the primary or secondary palate" [UBERON:cjm] | ||
| Xrefs: |
| ||
| Synonyms: |
"palate" EXACT [] "palatum" EXACT INCONSISTENT [] | ||
| Subset: | grouping_class |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000061(anatomical structure) |
|---|
Children
| is a: | UBERON:0005620 (primary palate) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007375 (primary or secondary palate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_f0367b0ecb3e205773bd3f98c7ad5e20 | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_f0367b0ecb3e205773bd3f98c7ad5e20 | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_2b24e17463255fbd45dab940947f814e | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_2b24e17463255fbd45dab940947f814e | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_2b24e17463255fbd45dab940947f814e | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_2b24e17463255fbd45dab940947f814e | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_2b24e17463255fbd45dab940947f814e | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_2b24e17463255fbd45dab940947f814e | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_2b24e17463255fbd45dab940947f814e | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_2b24e17463255fbd45dab940947f814e | p12@C17orf67 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_a01fe4f58f21ab364750af64cd8d7521 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_a01fe4f58f21ab364750af64cd8d7521 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_a01fe4f58f21ab364750af64cd8d7521 | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_a01fe4f58f21ab364750af64cd8d7521 | p14@MAB21L2 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_ccae960e7bc61b5e081fb2129790b7d7 | p@chr4:151505582..151505614, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_ccae960e7bc61b5e081fb2129790b7d7 | p@chr4:151505582..151505614, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_ad41000988d7759f2e7c22bd22507b3c | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_ad41000988d7759f2e7c22bd22507b3c | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_ad41000988d7759f2e7c22bd22507b3c | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_ad41000988d7759f2e7c22bd22507b3c | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_ad41000988d7759f2e7c22bd22507b3c | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_ad41000988d7759f2e7c22bd22507b3c | p@chr8:57354278..57354286, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_87f5c14479ed13e18ab0cb8009dbe53e | p@chr8:57802672..57802682, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_87f5c14479ed13e18ab0cb8009dbe53e | p@chr8:57802672..57802682, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_afdf9b96367b5684bf787bb4b592e587 | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_afdf9b96367b5684bf787bb4b592e587 | p1@AK123925 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_afdf9b96367b5684bf787bb4b592e587 | p7@ALX1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_afdf9b96367b5684bf787bb4b592e587 | p7@ALX1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_afdf9b96367b5684bf787bb4b592e587 | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_afdf9b96367b5684bf787bb4b592e587 | p1@AK123925 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_50bda54c014fd7cc45ee8ef979efe88f | p23@FLT1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_50bda54c014fd7cc45ee8ef979efe88f | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_50bda54c014fd7cc45ee8ef979efe88f | p23@FLT1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_50bda54c014fd7cc45ee8ef979efe88f | p@chr2:33519090..33519092, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_4aec8fa41226b670d288bae575cd0bc8 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_4aec8fa41226b670d288bae575cd0bc8 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_4aec8fa41226b670d288bae575cd0bc8 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_4aec8fa41226b670d288bae575cd0bc8 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_4aec8fa41226b670d288bae575cd0bc8 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_4aec8fa41226b670d288bae575cd0bc8 | p@chr8:57354143..57354152, + |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_36ce2d803b7e7b56d8d06074dc2c9136 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_36ce2d803b7e7b56d8d06074dc2c9136 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_36ce2d803b7e7b56d8d06074dc2c9136 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_36ce2d803b7e7b56d8d06074dc2c9136 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_36ce2d803b7e7b56d8d06074dc2c9136 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_36ce2d803b7e7b56d8d06074dc2c9136 | p2@TAS1R1 |
| 2.21e-40 | FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_e3c7af59ae19cc04e16e700663ff3629 | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_e3c7af59ae19cc04e16e700663ff3629 | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_e3c7af59ae19cc04e16e700663ff3629 | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_e3c7af59ae19cc04e16e700663ff3629 | p@chr16:67687543..67687559, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_8f339128fdf7bfa0d8710c2e4a70b8ee | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_8f339128fdf7bfa0d8710c2e4a70b8ee | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_8f339128fdf7bfa0d8710c2e4a70b8ee | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_8f339128fdf7bfa0d8710c2e4a70b8ee | p@chr6:46190219..46190230, - |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_f8541a4b9ef00c8dfc64cd6ea5cfac01 | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_f8541a4b9ef00c8dfc64cd6ea5cfac01 | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_f8541a4b9ef00c8dfc64cd6ea5cfac01 | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_f8541a4b9ef00c8dfc64cd6ea5cfac01 | p5@PENK |
| 1.84e-34 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_f8541a4b9ef00c8dfc64cd6ea5cfac01 | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_f8541a4b9ef00c8dfc64cd6ea5cfac01 | p5@PENK |
| 2.58e-34 | FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_af080c5c767a677250e912fdd847c581 | p9@SIX1 |
| 2.58e-34 | FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_af080c5c767a677250e912fdd847c581 | p9@SIX1 |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_f320f675b1a1f1c05698b152df2ff611 | p@chr6:134327986..134327991, - |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_f320f675b1a1f1c05698b152df2ff611 | p@chr6:134327986..134327991, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_b9372f4a3699f542f3dcf41acc9c375b | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_b9372f4a3699f542f3dcf41acc9c375b | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_b9372f4a3699f542f3dcf41acc9c375b | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_b9372f4a3699f542f3dcf41acc9c375b | p@chr8:57353676..57353688, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_11f3d32e3d791c7b93293efb5a10181e | p12@FBN2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_11f3d32e3d791c7b93293efb5a10181e | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_11f3d32e3d791c7b93293efb5a10181e | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_11f3d32e3d791c7b93293efb5a10181e | p12@FBN2 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_11f3d32e3d791c7b93293efb5a10181e | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_11f3d32e3d791c7b93293efb5a10181e | p4@PLAC1 |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_0ed5db72b18b15e9bedecefb4177d121 | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_0ed5db72b18b15e9bedecefb4177d121 | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_0ed5db72b18b15e9bedecefb4177d121 | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_0ed5db72b18b15e9bedecefb4177d121 | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_0ed5db72b18b15e9bedecefb4177d121 | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_0ed5db72b18b15e9bedecefb4177d121 | p@chr8:57353982..57353991, - |
| 9.99e-30 | FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_0aa8e0e7b91ea7ff2038d0da37325706 | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_0aa8e0e7b91ea7ff2038d0da37325706 | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_0aa8e0e7b91ea7ff2038d0da37325706 | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_0aa8e0e7b91ea7ff2038d0da37325706 | p10@ITGA8 |
| 1.33e-29 | FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_b44196f77a18b62908f3a6d8cb815f01 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_b44196f77a18b62908f3a6d8cb815f01 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_b44196f77a18b62908f3a6d8cb815f01 | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_b44196f77a18b62908f3a6d8cb815f01 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_b44196f77a18b62908f3a6d8cb815f01 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_b44196f77a18b62908f3a6d8cb815f01 | p@chr17:79071218..79071221, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_9a9cddab09283ea459d4466dbc60a3cf | p@chr1:21904551..21904569, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_9a9cddab09283ea459d4466dbc60a3cf | p@chr1:21904551..21904569, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_4c127edb343380c384ac44d155571fbd | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_4c127edb343380c384ac44d155571fbd | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_4c127edb343380c384ac44d155571fbd | p18@MEF2D |
| 3.16e-29 | FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_4c127edb343380c384ac44d155571fbd | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_4c127edb343380c384ac44d155571fbd | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_4c127edb343380c384ac44d155571fbd | p18@MEF2D |
| 4.2e-29 | FFCP PHASE1:Hg19::chr15:52606315..52606320,-#_939abc95ab2ec0dfaa1121291d6bd802 | p@chr15:52606315..52606320, - |
| 4.2e-29 | FFCP PHASE2:Hg19::chr4:151503350..151503358,+#_939abc95ab2ec0dfaa1121291d6bd802 | p11@MAB21L2 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Roof of the mouth lined with ciliated epithelium.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
