CL:0002248: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002248
|name=pluripotent stem cell
|namespace=cell
|def="A pluripotent stem cell has the ability to form cells from all three germ layers (ectoderm, mesoderm,...") |
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|def="A pluripotent stem cell has the ability to form cells from all three germ layers (ectoderm, mesoderm, and endoderm). However, unlike totipotent stem cells, they cell can not generate all the cells of the whole organism such as placenta." [GOC:tfm, PMID: 19343304] | |def="A pluripotent stem cell has the ability to form cells from all three germ layers (ectoderm, mesoderm, and endoderm). However, unlike totipotent stem cells, they cell can not generate all the cells of the whole organism such as placenta." [GOC:tfm, PMID:19343304] | ||
|xref=FMA:70570 | |xref=FMA:70570 | ||
|is_a=CL:0000723 | |is_a=CL:0000723 | ||
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|obo_creation_date=2010-09-07T04:26:06Z | |obo_creation_date=2010-09-07T04:26:06Z | ||
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
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Revision as of 17:27, 26 June 2012
| Name: | pluripotent stem cell | ||
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| Namespace: | cell | ||
| Definition: | "A pluripotent stem cell has the ability to form cells from all three germ layers (ectoderm, mesoderm, and endoderm). However, unlike totipotent stem cells, they cell can not generate all the cells of the whole organism such as placenta." [GOC:tfm, PMID:19343304] | ||
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| Created by: | tmeehan | ||
| Creation date: | 2010-09-07T04:26:06Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000723(somatic stem cell) |
|---|
Children
| derives from: | FF:0300101 (hIPS sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 14380-156B6 (hIPS, biol_rep1)
- 14381-156B7 (hIPS, biol_rep2)
- 14382-156B8 (hIPS, biol_rep3)
- 14383-156B9 (hIPS +CCl2, biol_rep1)
- 14384-156C1 (hIPS +CCl2, biol_rep2)
- 14385-156C2 (hIPS +CCl2, biol_rep3)
Mouse (Mus musculus)
- 14380-156B6 (hIPS, biol_rep1)
- 14381-156B7 (hIPS, biol_rep2)
- 14382-156B8 (hIPS, biol_rep3)
- 14383-156B9 (hIPS +CCl2, biol_rep1)
- 14384-156C1 (hIPS +CCl2, biol_rep2)
- 14385-156C2 (hIPS +CCl2, biol_rep3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002248 (pluripotent stem cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
