CL:0002549: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date=2011-02-28T05:01:39Z | |obo_creation_date=2011-02-28T05:01:39Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:27, 26 June 2012
| Name: | fibroblast of choroid plexus |
|---|---|
| Namespace: | cell |
| Definition: | "A fibroblast that is part of the choroid plexus." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-02-28T05:01:39Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000057(fibroblast) |
|---|
Children
| derives from: | FF:0000060 (human fibroblast of choroid plexus sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11492-119E7 (Fibroblast - Choroid Plexus, donor1)
- 11572-120E6 (Fibroblast - Choroid Plexus, donor2)
- 11653-122E6 (Fibroblast - Choroid Plexus, donor3)
Mouse (Mus musculus)
- 11492-119E7 (Fibroblast - Choroid Plexus, donor1)
- 11572-120E6 (Fibroblast - Choroid Plexus, donor2)
- 11653-122E6 (Fibroblast - Choroid Plexus, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002549 (fibroblast of choroid plexus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:201708474..201708479,+#_17efbaee1e6730ebd38f8e4074f71a0b | p58@NAV1 |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:201708474..201708479,+#_17efbaee1e6730ebd38f8e4074f71a0b | p58@NAV1 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:201708485..201708494,+#_17efbaee1e6730ebd38f8e4074f71a0b | p55@NAV1 |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:201708485..201708494,+#_17efbaee1e6730ebd38f8e4074f71a0b | p55@NAV1 |
| 8.99e-131 | FFCP PHASE1:Hg19::chr8:24997361..24997368,-#_8eb2bba94b48a623360b0e3bc9b13c21 | p@chr8:24997361..24997368, - |
| 8.99e-131 | FFCP PHASE2:Hg19::chr8:24997361..24997368,-#_8eb2bba94b48a623360b0e3bc9b13c21 | p@chr8:24997361..24997368, - |
| 3.96e-66 | FFCP PHASE2:Hg19::chr17:75471711..75471726,+#_264969a3a95a35b9d937e93e50b2170b | p73@SEPT9 |
| 3.96e-66 | FFCP PHASE1:Hg19::chr17:75471711..75471726,+#_264969a3a95a35b9d937e93e50b2170b | p73@SEPT9 |
| 3.96e-66 | FFCP PHASE1:Hg19::chr3:146517344..146517356,+#_264969a3a95a35b9d937e93e50b2170b | p@chr3:146517344..146517356, + |
| 3.96e-66 | FFCP PHASE2:Hg19::chr3:146517344..146517356,+#_264969a3a95a35b9d937e93e50b2170b | p@chr3:146517344..146517356, + |
| 4.77e-57 | FFCP PHASE2:Hg19::chr12:15941738..15941768,+#_9b56d05c49a28cc5bd9e9ca39f366f32 | p@chr12:15941738..15941768, + |
| 4.77e-57 | FFCP PHASE1:Hg19::chr12:15941738..15941768,+#_9b56d05c49a28cc5bd9e9ca39f366f32 | p@chr12:15941738..15941768, + |
| 6.36e-57 | FFCP PHASE1:Hg19::chr5:149537789..149537803,-#_60504f26dd8f2144cbe8dadc5de5cfac | p@chr5:149537789..149537803, - |
| 6.36e-57 | FFCP PHASE2:Hg19::chr5:149537789..149537803,-#_60504f26dd8f2144cbe8dadc5de5cfac | p@chr5:149537789..149537803, - |
| 8.82e-51 | FFCP PHASE2:Hg19::chr10:105677427..105677438,-#_dfbbc4137800a9137038aa5a00a71381 | p7@OBFC1 |
| 8.82e-51 | FFCP PHASE1:Hg19::chr14:76072096..76072107,+#_dfbbc4137800a9137038aa5a00a71381 | p7@FLVCR2 |
| 8.82e-51 | FFCP PHASE2:Hg19::chr14:76072096..76072107,+#_dfbbc4137800a9137038aa5a00a71381 | p7@FLVCR2 |
| 8.82e-51 | FFCP PHASE1:Hg19::chr10:105677427..105677438,-#_dfbbc4137800a9137038aa5a00a71381 | p7@OBFC1 |
| 5.15e-50 | FFCP PHASE1:Hg19::chr16:65159735..65159744,-#_a96b58d1e255be6be53098a8de608bd3 | p@chr16:65159735..65159744, - |
| 5.15e-50 | FFCP PHASE2:Hg19::chr16:65159735..65159744,-#_a96b58d1e255be6be53098a8de608bd3 | p@chr16:65159735..65159744, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr5:158523468..158523481,-#_5f18db5ccdb18cdd0d16e4e3cc8b786d | p20@EBF1 |
| 1.22e-44 | FFCP PHASE2:Hg19::chr5:158523468..158523481,-#_5f18db5ccdb18cdd0d16e4e3cc8b786d | p20@EBF1 |
| 1.53e-44 | FFCP PHASE1:Hg19::chr11:60680190..60680212,+#_88964c7b4b7186242c7ca42b1e025511 | p@chr11:60680190..60680212, + |
| 1.53e-44 | FFCP PHASE2:Hg19::chr11:60680190..60680212,+#_88964c7b4b7186242c7ca42b1e025511 | p@chr11:60680190..60680212, + |
| 5.99e-41 | FFCP PHASE1:Hg19::chr9:132390755..132390781,+#_4f4c9f72aaeaa169bea392b9eb5f1e38 | p7@METTL11A |
| 5.99e-41 | FFCP PHASE2:Hg19::chr9:132390755..132390781,+#_4f4c9f72aaeaa169bea392b9eb5f1e38 | p7@METTL11A |
| 8.98e-41 | FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_94a003d3cd30fd6674e7120be9851575 | p@chr1:19778678..19778689, - |
| 8.98e-41 | FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_94a003d3cd30fd6674e7120be9851575 | p@chr1:19778678..19778689, - |
| 1.34e-40 | FFCP PHASE1:Hg19::chr4:111397216..111397250,+#_77bc6814b90ccc8e8dccd42b2ea386ab | p8@ENPEP |
| 1.34e-40 | FFCP PHASE2:Hg19::chr4:111397216..111397250,+#_77bc6814b90ccc8e8dccd42b2ea386ab | p8@ENPEP |
| 9.84e-37 | FFCP PHASE1:Hg19::chr11:44331735..44331747,-#_8c5e88632f61ac04407e86e3c6e3bab4 | p3@ALX4 |
| 9.84e-37 | FFCP PHASE2:Hg19::chr11:44331735..44331747,-#_8c5e88632f61ac04407e86e3c6e3bab4 | p3@ALX4 |
| 1.18e-36 | FFCP PHASE2:Hg19::chr1:236203048..236203055,-#_9ef24b682ff86d46de966f6fd9384645 | p@chr1:236203048..236203055, - |
| 1.18e-36 | FFCP PHASE1:Hg19::chr1:236203048..236203055,-#_9ef24b682ff86d46de966f6fd9384645 | p@chr1:236203048..236203055, - |
| 1.42e-36 | FFCP PHASE1:Hg19::chr6:72970377..72970387,+#_a4631b3d7a36849b87f2878e209a7f0c | p20@RIMS1 |
| 1.42e-36 | FFCP PHASE2:Hg19::chr6:72970377..72970387,+#_a4631b3d7a36849b87f2878e209a7f0c | p20@RIMS1 |
| 1.7e-36 | FFCP PHASE1:Hg19::chr14:87636652..87636657,-#_8a8323ce671094ec231db8d5787bf597 | p@chr14:87636652..87636657, - |
| 1.7e-36 | FFCP PHASE2:Hg19::chr14:87636652..87636657,-#_8a8323ce671094ec231db8d5787bf597 | p@chr14:87636652..87636657, - |
| 2.04e-36 | FFCP PHASE2:Hg19::chr14:61654271..61654282,+#_68cbc75eb7ba90f379cd25a1c9b8aa20 | p30@PRKCH |
| 2.04e-36 | FFCP PHASE1:Hg19::chr14:61654271..61654282,+#_68cbc75eb7ba90f379cd25a1c9b8aa20 | p30@PRKCH |
| 1.11e-34 | FFCP PHASE1:Hg19::chr12:108732917..108732935,-#_38926426e8184158f1a4fb5561a26fdb | p5@CMKLR1 |
| 1.11e-34 | FFCP PHASE2:Hg19::chr12:108732917..108732935,-#_38926426e8184158f1a4fb5561a26fdb | p5@CMKLR1 |
| 5.04e-34 | FFCP PHASE1:Hg19::chr9:130830760..130830783,+#_25427ab105d9a97203346ed7cea19682 | p11@SLC25A25 |
| 5.04e-34 | FFCP PHASE2:Hg19::chr9:130830760..130830783,+#_25427ab105d9a97203346ed7cea19682 | p11@SLC25A25 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr8:128902610..128902630,+#_bb6cd3274cb81a5e8dbca8696852d815 | p17@PVT1 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr6:36906253..36906260,-#_bb6cd3274cb81a5e8dbca8696852d815 | p@chr6:36906253..36906260, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr6:36906253..36906260,-#_bb6cd3274cb81a5e8dbca8696852d815 | p@chr6:36906253..36906260, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr2:231988425..231988433,-#_bb6cd3274cb81a5e8dbca8696852d815 | p11@HTR2B |
| 7.05e-34 | FFCP PHASE2:Hg19::chr8:128902610..128902630,+#_bb6cd3274cb81a5e8dbca8696852d815 | p17@PVT1 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr2:231988425..231988433,-#_bb6cd3274cb81a5e8dbca8696852d815 | p11@HTR2B |
| 7.05e-34 | FFCP PHASE1:Hg19::chr15:95869480..95869493,+#_bb6cd3274cb81a5e8dbca8696852d815 | p@chr15:95869480..95869493, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr15:95869480..95869493,+#_bb6cd3274cb81a5e8dbca8696852d815 | p@chr15:95869480..95869493, + |
| 1.37e-31 | FFCP PHASE2:Hg19::chr2:223536233..223536234,+#_2eaa7cfc22cef8fb60a39a297218cfb8 | p3@MOGAT1 |
| 1.37e-31 | FFCP PHASE1:Hg19::chr2:223536233..223536234,+#_2eaa7cfc22cef8fb60a39a297218cfb8 | p3@MOGAT1 |
| 4.71e-31 | FFCP PHASE1:Hg19::chr3:147127961..147127972,+#_13dbed3a41fa5c07b2db8f8f2b264411 | p3@AB464362 |
| 4.71e-31 | FFCP PHASE2:Hg19::chr3:147127961..147127972,+#_13dbed3a41fa5c07b2db8f8f2b264411 | p3@AB464362 |
| 4.71e-31 | FFCP PHASE1:Hg19::chr5:134260455..134260471,-#_13dbed3a41fa5c07b2db8f8f2b264411 | p@chr5:134260455..134260471, - |
| 4.71e-31 | FFCP PHASE2:Hg19::chr5:134260455..134260471,-#_13dbed3a41fa5c07b2db8f8f2b264411 | p@chr5:134260455..134260471, - |
| 6.96e-30 | FFCP PHASE1:Hg19::chr16:65159902..65159909,-#_909fd6bcfcf6ac170e5474f274bfb30d | p@chr16:65159902..65159909, - |
| 6.96e-30 | FFCP PHASE2:Hg19::chr16:65159902..65159909,-#_909fd6bcfcf6ac170e5474f274bfb30d | p@chr16:65159902..65159909, - |
| 1.08e-29 | FFCP PHASE1:Hg19::chr5:149537807..149537827,-#_65b8f63959f0998309c709327ce6e18b | p@chr5:149537807..149537827, - |
| 1.08e-29 | FFCP PHASE2:Hg19::chr5:149537807..149537827,-#_65b8f63959f0998309c709327ce6e18b | p@chr5:149537807..149537827, - |
| 9.09e-27 | FFCP PHASE1:Hg19::chr3:147124547..147124563,-#_008607af4a8f211801d9f7a3579352a1 | p6@ZIC4 |
| 9.09e-27 | FFCP PHASE2:Hg19::chr3:147124547..147124563,-#_008607af4a8f211801d9f7a3579352a1 | p6@ZIC4 |
| 1.67e-26 | FFCP PHASE1:Hg19::chr2:238066183..238066194,-#_cfd74cef7dfcb9e986d3964086b32383 | p@chr2:238066183..238066194, - |
| 1.67e-26 | FFCP PHASE2:Hg19::chr2:238066183..238066194,-#_cfd74cef7dfcb9e986d3964086b32383 | p@chr2:238066183..238066194, - |
| 4.08e-26 | FFCP PHASE1:Hg19::chr5:40910094..40910097,+#_13995dbc570647ab53d266457c4540d0 | p@chr5:40910094..40910097, + |
| 4.08e-26 | FFCP PHASE2:Hg19::chr5:40910094..40910097,+#_13995dbc570647ab53d266457c4540d0 | p@chr5:40910094..40910097, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr11:61634768..61634777,+#_890b8e37ac5525d8706dd3108e489c36 | p@chr11:61634768..61634777, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr11:61634768..61634777,+#_890b8e37ac5525d8706dd3108e489c36 | p@chr11:61634768..61634777, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr8:58658778..58658788,+#_30b5345358b85ef14dd30f9e2b8c77ff | p2@ENST00000518934, p2@uc003xti.1 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr8:58658778..58658788,+#_30b5345358b85ef14dd30f9e2b8c77ff | p2@ENST00000518934, p2@uc003xti.1 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr6:129504885..129504896,-#_e52a57810cb08898e884071ebb898e31 | p@chr6:129504885..129504896, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr6:129504885..129504896,-#_e52a57810cb08898e884071ebb898e31 | p@chr6:129504885..129504896, - |
| 1.44e-25 | FFCP PHASE1:Hg19::chr12:279773..279812,+#_396cff8488ba43f04553127a0681c184 | p@chr12:279773..279812, + |
| 1.44e-25 | FFCP PHASE1:Hg19::chr3:147127358..147127369,+#_396cff8488ba43f04553127a0681c184 | p16@ZIC1 |
| 1.44e-25 | FFCP PHASE2:Hg19::chr3:147127358..147127369,+#_396cff8488ba43f04553127a0681c184 | p16@ZIC1 |
| 1.44e-25 | FFCP PHASE2:Hg19::chr12:279773..279812,+#_396cff8488ba43f04553127a0681c184 | p@chr12:279773..279812, + |
| 2.37e-25 | FFCP PHASE1:Hg19::chr3:147112699..147112713,-#_e9502dcef9587e3266c27ba9d5d38416 | p@chr3:147112699..147112713, - |
| 2.37e-25 | FFCP PHASE2:Hg19::chr3:147112699..147112713,-#_e9502dcef9587e3266c27ba9d5d38416 | p@chr3:147112699..147112713, - |
| 1.15e-24 | FFCP PHASE2:Hg19::chr1:47903765..47903783,+#_d2a4012b276ed7d5378059ff230105f8 | p5@FOXD2 |
| 1.15e-24 | FFCP PHASE1:Hg19::chr1:47903765..47903783,+#_d2a4012b276ed7d5378059ff230105f8 | p5@FOXD2 |
| 1.45e-24 | FFCP PHASE1:Hg19::chr9:16138889..16138902,-#_ac5d9f76a843e04f70822420aafbca98 | p@chr9:16138889..16138902, - |
| 1.45e-24 | FFCP PHASE2:Hg19::chr9:16138889..16138902,-#_ac5d9f76a843e04f70822420aafbca98 | p@chr9:16138889..16138902, - |
| 2.97e-24 | FFCP PHASE2:Hg19::chr2:192128035..192128057,+#_60aa778a5e66ee0c420b6448b3be8a7e | p6@MYO1B |
| 2.97e-24 | FFCP PHASE1:Hg19::chr2:192128035..192128057,+#_60aa778a5e66ee0c420b6448b3be8a7e | p6@MYO1B |
| 3.34e-24 | FFCP PHASE1:Hg19::chr3:147088197..147088208,-#_3a89c0085ab6814a7b6effed69729b10 | p@chr3:147088197..147088208, - |
| 3.34e-24 | FFCP PHASE2:Hg19::chr3:147088197..147088208,-#_3a89c0085ab6814a7b6effed69729b10 | p@chr3:147088197..147088208, - |
| 5.35e-24 | FFCP PHASE1:Hg19::chr17:1013251..1013277,-#_54981a26d06eb00da9e962421897f5ae | p@chr17:1013251..1013277, - |
| 5.35e-24 | FFCP PHASE2:Hg19::chr17:1013251..1013277,-#_54981a26d06eb00da9e962421897f5ae | p@chr17:1013251..1013277, - |
| 1.01e-23 | FFCP PHASE1:Hg19::chr11:60640905..60640919,+#_9f087921ce93e22b24a424ef1a5e6243 | p@chr11:60640905..60640919, + |
| 1.01e-23 | FFCP PHASE2:Hg19::chr11:60640905..60640919,+#_9f087921ce93e22b24a424ef1a5e6243 | p@chr11:60640905..60640919, + |
| 1.42e-23 | FFCP PHASE2:Hg19::chr17:75446774..75446783,+#_248e55bbcdb9e1f9c3c7e05d075eda31 | p49@SEPT9 |
| 1.42e-23 | FFCP PHASE1:Hg19::chr17:75446774..75446783,+#_248e55bbcdb9e1f9c3c7e05d075eda31 | p49@SEPT9 |
| 3.49e-23 | FFCP PHASE1:Hg19::chr11:8832119..8832124,-#_facd3a9bb733486247f1a35c9dd58198 | p30@ST5 |
| 3.49e-23 | FFCP PHASE2:Hg19::chr11:8832119..8832124,-#_facd3a9bb733486247f1a35c9dd58198 | p30@ST5 |
| 6.84e-23 | FFCP PHASE1:Hg19::chr6:55739244..55739256,-#_74cdc73adb9fe6503409526a6150cbac | p2@AB527577, p2@CU693346 |
| 6.84e-23 | FFCP PHASE2:Hg19::chr6:55739244..55739256,-#_74cdc73adb9fe6503409526a6150cbac | p2@AB527577, p2@CU693346 |
| 2.06e-22 | FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_a01dfa4400a636188737e6482f4d2245 | p6@CCDC86 |
| 2.06e-22 | FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_a01dfa4400a636188737e6482f4d2245 | p6@CCDC86 |
