CL:0002076: Difference between revisions
From FANTOM5_SSTAR
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|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=CL:0000223 | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
Revision as of 13:03, 27 June 2012
| Name: | endo-epithelial cell | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "An epithelial cell derived from endoderm." [FMA:69075, GOC:tfm, http://63.198.234.228/OpenFMA/Endo-epithelial%20cell.html] | ||
| Xrefs: |
| ||
| Created by: | tmeehan | ||
| Creation date: | 2010-06-29T03:38:14Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000066(epithelial cell),CL:0002371(somatic cell) |
|---|---|
| develops_from: | CL:0000223(endodermal cell) |
Children
| is a: | CL:0002149 (epithelial cell of uterus),CL:0002231 (epithelial cell of prostate),CL:0002251 (epithelial cell of alimentary canal),CL:0002261 (endothelial cell of viscerocranial mucosa),CL:0002293 (epithelial cell of thymus),CL:0002368 (respiratory epithelial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10434-106E2 (oral squamous cell carcinoma cell line:Ca9-22)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10511-107D7
- 10512-107D8
- 10513-107D9 (colon carcinoma cell line:CACO-2)
- 10523-107F1
- 10532-107G1
... further results Mouse (Mus musculus)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10434-106E2 (oral squamous cell carcinoma cell line:Ca9-22)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10511-107D7
- 10512-107D8
- 10513-107D9 (colon carcinoma cell line:CACO-2)
- 10523-107F1
- 10532-107G1
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002076 (endo-epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.06e-52 | FFCP PHASE1:Mm9::chr2:173090551..173090558,+#_e709aa2ebfec49a9fba8cb8d072abd37 | p@chr2:173090551..173090558, + |
| 5.06e-52 | FFCP PHASE2:Mm9::chr2:173090551..173090558,+#_e709aa2ebfec49a9fba8cb8d072abd37 | p@chr2:173090551..173090558, + |
| 5.94e-49 | FFCP PHASE2:Mm9::chr2:167904248..167904260,+#_6736af1f58aa4dce06b1346b22afce88 | p@chr2:167904248..167904260, + |
| 5.94e-49 | FFCP PHASE1:Mm9::chr2:167904248..167904260,+#_6736af1f58aa4dce06b1346b22afce88 | p@chr2:167904248..167904260, + |
| 1.31e-48 | FFCP PHASE1:Hg19::chr15:83953694..83953708,-#_50f8dec9b4b2a04e831d780b99d132ad | p4@BNC1 |
| 1.31e-48 | FFCP PHASE2:Hg19::chr15:83953694..83953708,-#_50f8dec9b4b2a04e831d780b99d132ad | p4@BNC1 |
| 6.25e-47 | FFCP PHASE2:Mm9::chr1:90912298..90912303,+#_deb1e0498dc8cb0822a154694f7d517a | p3@1700067G17Rik |
| 6.25e-47 | FFCP PHASE1:Mm9::chr1:90912298..90912303,+#_deb1e0498dc8cb0822a154694f7d517a | p3@1700067G17Rik |
| 2.35e-46 | FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_3fb2c77b4603b13f479d0901a1be0e54 | p@chr8:122335239..122335244, + |
| 2.35e-46 | FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_3fb2c77b4603b13f479d0901a1be0e54 | p@chr8:122335239..122335244, + |
| 6.82e-46 | FFCP PHASE2:Hg19::chr2:131669765..131669776,+#_763f9d536e4f09d4b0f6d29385a397c1 | p@chr2:131669765..131669776, + |
| 6.82e-46 | FFCP PHASE1:Hg19::chr2:131669765..131669776,+#_763f9d536e4f09d4b0f6d29385a397c1 | p@chr2:131669765..131669776, + |
| 3.7e-44 | FFCP PHASE2:Hg19::chr3:189653493..189653498,-#_f2eef1d1dc4891adbd7d33e8c15afe2f | p@chr3:189653493..189653498, - |
| 3.7e-44 | FFCP PHASE1:Hg19::chr3:189653493..189653498,-#_f2eef1d1dc4891adbd7d33e8c15afe2f | p@chr3:189653493..189653498, - |
| 4.73e-44 | FFCP PHASE2:Hg19::chr6:56484092..56484104,-#_94e9fcc09347e2ee4b7c74a5799cedac | p63@DST |
| 4.73e-44 | FFCP PHASE1:Hg19::chr6:56484092..56484104,-#_94e9fcc09347e2ee4b7c74a5799cedac | p63@DST |
| 8.81e-44 | FFCP PHASE1:Mm9::chr7:123602470..123602475,-#_59774b8b6567f24cc9708cd3ca12f63f | p@chr7:123602470..123602475, - |
| 8.81e-44 | FFCP PHASE2:Mm9::chr7:123602470..123602475,-#_59774b8b6567f24cc9708cd3ca12f63f | p@chr7:123602470..123602475, - |
| 1.67e-43 | FFCP PHASE2:Hg19::chr20:60953877..60953897,-#_ad2dd4d142f61f60defad88e94f3f700 | p@chr20:60953877..60953897, - |
| 1.67e-43 | FFCP PHASE1:Hg19::chr20:60953877..60953897,-#_ad2dd4d142f61f60defad88e94f3f700 | p@chr20:60953877..60953897, - |
| 9.2e-43 | FFCP PHASE1:Mm9::chr17:57201412..57201418,-#_8cca1d1d952dab1a7ef48a68bcb91e5e | p@chr17:57201412..57201418, - |
| 9.2e-43 | FFCP PHASE2:Mm9::chr17:57201412..57201418,-#_8cca1d1d952dab1a7ef48a68bcb91e5e | p@chr17:57201412..57201418, - |
| 1.73e-42 | FFCP PHASE2:Hg19::chr3:69590414..69590433,-#_7b89c448da949131d1ead15aa162f26a | p14@FRMD4B |
| 1.73e-42 | FFCP PHASE1:Hg19::chr3:69590414..69590433,-#_7b89c448da949131d1ead15aa162f26a | p14@FRMD4B |
| 4.83e-42 | FFCP PHASE2:Hg19::chr17:39942208..39942219,-#_49b933f1d44be20cc80cdbb2b3bff720 | p7@JUP |
| 4.83e-42 | FFCP PHASE1:Hg19::chr17:39942208..39942219,-#_49b933f1d44be20cc80cdbb2b3bff720 | p7@JUP |
| 5.81e-42 | FFCP PHASE2:Hg19::chr1:153534037..153534052,-#_f115aa91d058350bdea02d51c2fe10e7 | p@chr1:153534037..153534052, - |
| 5.81e-42 | FFCP PHASE1:Hg19::chr1:153534037..153534052,-#_f115aa91d058350bdea02d51c2fe10e7 | p@chr1:153534037..153534052, - |
| 7.07e-42 | FFCP PHASE2:Hg19::chr1:153536234..153536259,-#_4ac3c77a6996a1743d35e0c4b12fb8cd | p9@S100A2 |
| 7.07e-42 | FFCP PHASE1:Hg19::chr1:153536234..153536259,-#_4ac3c77a6996a1743d35e0c4b12fb8cd | p9@S100A2 |
| 1.64e-41 | FFCP PHASE1:Hg19::chr8:144815895..144815912,-#_8c21ab541e0cc157db7c0591f285abd5 | p4@FAM83H |
| 1.64e-41 | FFCP PHASE2:Hg19::chr8:144815895..144815912,-#_8c21ab541e0cc157db7c0591f285abd5 | p4@FAM83H |
| 2.3e-41 | FFCP PHASE1:Hg19::chr1:35220725..35220754,+#_976ba146628c4c26780a1a2073935136 | p2@GJB5 |
| 2.3e-41 | FFCP PHASE2:Hg19::chr1:35220725..35220754,+#_976ba146628c4c26780a1a2073935136 | p2@GJB5 |
| 3.02e-41 | FFCP PHASE2:Hg19::chr17:39942245..39942256,-#_bd5dc97225f6f1e051ea3f9b49b058ec | p9@JUP |
| 3.02e-41 | FFCP PHASE1:Hg19::chr17:39942245..39942256,-#_bd5dc97225f6f1e051ea3f9b49b058ec | p9@JUP |
| 3.42e-41 | FFCP PHASE1:Mm9::chr4:155434167..155434177,+#_47add4bfcdb13262961400021ceeca41 | p@chr4:155434167..155434177, + |
| 3.42e-41 | FFCP PHASE2:Mm9::chr4:155434167..155434177,+#_47add4bfcdb13262961400021ceeca41 | p@chr4:155434167..155434177, + |
| 3.68e-41 | FFCP PHASE1:Hg19::chr1:153536265..153536284,-#_d007c32f0315bfc3833c1fdb5d60551d | p11@S100A2 |
| 3.68e-41 | FFCP PHASE2:Hg19::chr1:153536265..153536284,-#_d007c32f0315bfc3833c1fdb5d60551d | p11@S100A2 |
| 4.0e-41 | FFCP PHASE1:Mm9::chr18:36576247..36576252,-#_3618b53916512bb518e401c29a21ca7a | p@chr18:36576247..36576252, - |
| 4.0e-41 | FFCP PHASE2:Mm9::chr18:36576247..36576252,-#_3618b53916512bb518e401c29a21ca7a | p@chr18:36576247..36576252, - |
| 4.1e-41 | FFCP PHASE2:Hg19::chr1:2360084..2360095,+#_10987fbd8ad12cbc5e371e9dac2834d8 | p@chr1:2360084..2360095, + |
| 4.1e-41 | FFCP PHASE1:Hg19::chr1:2360084..2360095,+#_10987fbd8ad12cbc5e371e9dac2834d8 | p@chr1:2360084..2360095, + |
| 4.99e-41 | FFCP PHASE1:Hg19::chr14:51955873..51955899,+#_f5a6dbc8605257b5cde78987f3257ae9 | p12@FRMD6 |
| 4.99e-41 | FFCP PHASE2:Hg19::chr14:51955873..51955899,+#_f5a6dbc8605257b5cde78987f3257ae9 | p12@FRMD6 |
| 1.03e-40 | FFCP PHASE2:Mm9::chr8:64192378..64192389,+#_aacbd67e2e53724be0f30d03fb4aa81d | p@chr8:64192378..64192389, + |
| 1.03e-40 | FFCP PHASE1:Mm9::chr8:64192378..64192389,+#_aacbd67e2e53724be0f30d03fb4aa81d | p@chr8:64192378..64192389, + |
| 1.34e-40 | FFCP PHASE2:Hg19::chr14:51955524..51955550,+#_30db77e0c44a2555d6334819bd37fc73 | p9@FRMD6 |
| 1.34e-40 | FFCP PHASE1:Hg19::chr14:51955524..51955550,+#_30db77e0c44a2555d6334819bd37fc73 | p9@FRMD6 |
| 2.97e-40 | FFCP PHASE2:Hg19::chr3:189027876..189027892,+#_2a36f27b4613f30e3e7c8049a3e3b344 | p1@TPRG1 |
| 2.97e-40 | FFCP PHASE1:Hg19::chr3:189027876..189027892,+#_2a36f27b4613f30e3e7c8049a3e3b344 | p1@TPRG1 |
| 3.08e-40 | FFCP PHASE2:Hg19::chr1:209602671..209602695,+#_533400f4f2c63ec6058467b85ffb42fc | p1@ENST00000458250 |
| 3.08e-40 | FFCP PHASE1:Hg19::chr1:209602671..209602695,+#_533400f4f2c63ec6058467b85ffb42fc | p1@ENST00000458250 |
| 3.29e-40 | FFCP PHASE1:Mm9::chr7:107413155..107413177,+#_f37c23bd4f97ddb3d14a27475af57ffe | p1@Gpx2-ps1 |
| 3.29e-40 | FFCP PHASE2:Mm9::chr7:107413155..107413177,+#_f37c23bd4f97ddb3d14a27475af57ffe | p1@Gpx2-ps1 |
| 5.71e-40 | FFCP PHASE2:Hg19::chr17:39942268..39942282,-#_a021d3be31e3e2be80dad217ce1bbcd8 | p6@JUP |
| 5.71e-40 | FFCP PHASE1:Hg19::chr17:39942268..39942282,-#_a021d3be31e3e2be80dad217ce1bbcd8 | p6@JUP |
| 6.87e-40 | FFCP PHASE2:Hg19::chr11:72432950..72432974,-#_51ca60bd0336ff3ed8a6a7638becff25 | p9@ARAP1 |
| 6.87e-40 | FFCP PHASE1:Hg19::chr11:72432950..72432974,-#_51ca60bd0336ff3ed8a6a7638becff25 | p9@ARAP1 |
| 8.62e-40 | FFCP PHASE2:Hg19::chr15:40532837..40532851,+#_5048c6a3005885c6c3cce02740b46355 | p8@PAK6 |
| 8.62e-40 | FFCP PHASE1:Hg19::chr15:40532837..40532851,+#_5048c6a3005885c6c3cce02740b46355 | p8@PAK6 |
| 1.12e-39 | FFCP PHASE2:Hg19::chr2:167041528..167041552,+#_5577f122e80ef16688bcba364d4cc2f5 | p1@BC029452 |
| 1.12e-39 | FFCP PHASE1:Hg19::chr2:167041528..167041552,+#_5577f122e80ef16688bcba364d4cc2f5 | p1@BC029452 |
| 2.16e-39 | FFCP PHASE2:Hg19::chr6:150346656..150346674,-#_f88b37642d00d1dda747089f340b6f48 | p1@RAET1L |
| 2.16e-39 | FFCP PHASE1:Hg19::chr6:150346656..150346674,-#_f88b37642d00d1dda747089f340b6f48 | p1@RAET1L |
| 2.66e-39 | FFCP PHASE2:Hg19::chr1:209979375..209979386,-#_d9a80c3f19e76c7fccfbadf7b1646827 | p4@IRF6 |
| 2.66e-39 | FFCP PHASE1:Hg19::chr1:209979375..209979386,-#_d9a80c3f19e76c7fccfbadf7b1646827 | p4@IRF6 |
| 4.52e-39 | FFCP PHASE1:Hg19::chr16:68679261..68679268,+#_8636f9cbe08c78e0dbb210243219fc94 | p3@CDH3 |
| 4.52e-39 | FFCP PHASE2:Hg19::chr16:68679261..68679268,+#_8636f9cbe08c78e0dbb210243219fc94 | p3@CDH3 |
| 6.24e-39 | FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_46be5c5943dc3f17cbd6f3b6011b47cd | p@chr3:122215917..122215967, - |
| 6.24e-39 | FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_46be5c5943dc3f17cbd6f3b6011b47cd | p@chr3:122215917..122215967, - |
| 7.01e-39 | FFCP PHASE2:Hg19::chr3:189507523..189507535,+#_88aa4b830e6d1113ebb425c066e9bfca | p5@TP63 |
| 7.01e-39 | FFCP PHASE1:Hg19::chr3:189507523..189507535,+#_88aa4b830e6d1113ebb425c066e9bfca | p5@TP63 |
| 8.61e-39 | FFCP PHASE2:Hg19::chr11:72432903..72432945,-#_12e9586679ef782dedd3f890eadde783 | p7@ARAP1 |
| 8.61e-39 | FFCP PHASE1:Hg19::chr11:72432903..72432945,-#_12e9586679ef782dedd3f890eadde783 | p7@ARAP1 |
| 9.06e-39 | FFCP PHASE2:Hg19::chr4:15939984..15939995,-#_6ad083ad6557efc2ab210732d79e45ab | p2@FGFBP1 |
| 9.06e-39 | FFCP PHASE1:Hg19::chr4:15939984..15939995,-#_6ad083ad6557efc2ab210732d79e45ab | p2@FGFBP1 |
| 9.27e-39 | FFCP PHASE2:Hg19::chr3:189507460..189507471,+#_a9646354a04302d1831fd94a8811c1f4 | p3@TP63 |
| 9.27e-39 | FFCP PHASE1:Hg19::chr3:189507460..189507471,+#_a9646354a04302d1831fd94a8811c1f4 | p3@TP63 |
| 9.3e-39 | FFCP PHASE1:Hg19::chr12:52913784..52913810,+#_5bbb7e042c02543ff0bf16e85b5a7fc4 | p@chr12:52913784..52913810, + |
| 9.3e-39 | FFCP PHASE2:Hg19::chr12:52913784..52913810,+#_5bbb7e042c02543ff0bf16e85b5a7fc4 | p@chr12:52913784..52913810, + |
| 9.38e-39 | FFCP PHASE2:Mm9::chr2:143738263..143738267,+#_57d19cb05fd5934c4b457b04546942ba | p@chr2:143738263..143738267, + |
| 9.38e-39 | FFCP PHASE1:Mm9::chr2:143738263..143738267,+#_57d19cb05fd5934c4b457b04546942ba | p@chr2:143738263..143738267, + |
| 9.42e-39 | FFCP PHASE1:Mm9::chr5:135442713..135442733,+#_e10ecc1b245d0cb91c96462b60446302 | p@chr5:135442713..135442733, + |
| 9.42e-39 | FFCP PHASE2:Mm9::chr5:135442713..135442733,+#_e10ecc1b245d0cb91c96462b60446302 | p@chr5:135442713..135442733, + |
| 9.59e-39 | FFCP PHASE1:Hg19::chr4:3388057..3388075,+#_486335716d35a0bb021342ce871e5a37 | p9@RGS12 |
| 9.59e-39 | FFCP PHASE2:Hg19::chr4:3388057..3388075,+#_486335716d35a0bb021342ce871e5a37 | p9@RGS12 |
| 1.18e-38 | FFCP PHASE2:Hg19::chr1:200864071..200864088,+#_35b42a796a1585ae71628e0040fd8e74 | p3@C1orf106 |
| 1.18e-38 | FFCP PHASE1:Hg19::chr1:200864071..200864088,+#_35b42a796a1585ae71628e0040fd8e74 | p3@C1orf106 |
| 1.62e-38 | FFCP PHASE2:Hg19::chr1:24646263..24646277,+#_5bb5b2e81d3a0dd1401990eeba1785a5 | p4@GRHL3 |
| 1.62e-38 | FFCP PHASE1:Hg19::chr1:24646263..24646277,+#_5bb5b2e81d3a0dd1401990eeba1785a5 | p4@GRHL3 |
| 1.92e-38 | FFCP PHASE2:Hg19::chr3:189586378..189586390,+#_3d45a7e398ee7aa2127e3d6e48c5c890 | p@chr3:189586378..189586390, + |
| 1.92e-38 | FFCP PHASE1:Hg19::chr3:189586378..189586390,+#_3d45a7e398ee7aa2127e3d6e48c5c890 | p@chr3:189586378..189586390, + |
| 2.14e-38 | FFCP PHASE2:Hg19::chr19:45281245..45281260,+#_a2528fd57dcfe004bd16ec5f3717210a | p1@CU688574 |
| 2.14e-38 | FFCP PHASE1:Hg19::chr19:45281245..45281260,+#_a2528fd57dcfe004bd16ec5f3717210a | p1@CU688574 |
| 2.9e-38 | FFCP PHASE1:Hg19::chr1:209827500..209827512,-#_c01830c2322de2c2c2f1cf7570de8ee6 | p@chr1:209827500..209827512, - |
| 2.9e-38 | FFCP PHASE2:Hg19::chr1:209827500..209827512,-#_c01830c2322de2c2c2f1cf7570de8ee6 | p@chr1:209827500..209827512, - |
| 3.76e-38 | FFCP PHASE2:Hg19::chr17:39741249..39741272,-#_259c9f829d79f6a301ce2dd2e3987107 | p@chr17:39741249..39741272, - |
| 3.76e-38 | FFCP PHASE1:Hg19::chr17:39741249..39741272,-#_259c9f829d79f6a301ce2dd2e3987107 | p@chr17:39741249..39741272, - |
