FFCP PHASE1:Hg19::chr3:182880514..182880528,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|description=CAGE_peak_1_at_LAMP3_5end | |description=CAGE_peak_1_at_LAMP3_5end | ||
|id=chr3:182880514..182880528,- | |id=chr3:182880514..182880528,- | ||
|ontology_enrichment_celltype=CL: | |ontology_enrichment_celltype=CL:0000860;1.56e-11;33!CL:0002057;1.56e-11;33!CL:0000473;8.89e-08;39!CL:0000234;8.89e-08;39!CL:0000990;1.16e-07;8 | ||
| | |ontology_enrichment_development=CL:0002057;4.52e-08;42 | ||
| | |ontology_enrichment_disease=DOID:1749;8.65e-07;14 | ||
|ontology_enrichment_uberon= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,7.39557661096953,1.20538905604795,0,0.975865597581014,0,0,0.940364164434263,0,0,0,29.1899209957174,24.8764786033336,23.1409697062217,1.18009283054671,0.383829398097213,0.154816123316076,0,0,11.8321283253372,0,0,0.587200878669695,6.64794490238253,9.82667792603694,4.77423915574874,0.895661896959697,0.971680998056939,0,0,1.13362783106643,0.485168122375632,1.62700325833979,8.63452564845834,9.91060386864331,9.20615655430881,11.2710710872804,15.6078271726466,28.958637181876,42.6019891165325,54.1705946377367,0.752969358170419,1.36453075028923,1.34834090667051,19.8954530041087,35.3021929783703,38.9995646737415,4.94776950280074,5.78444607102732,7.2458207590558,43.5313857942876,98.1576438715672,110.862360321212,2.00998932205395,4.69334626578181,7.60160956467908,42.9833646869692,120.058509331946,121.5215567773,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0,0,2.84606484554724,0,0,0,8.40762844472304,0,4.72103448273199,1.57204305099666,2.05601498999509,0.501559486172034,4.56291173287027,5.20792586308207,1.94826728407911,0.779873198196215,3.24066498222321,2.43687284041983,4.60366568400527,1.79327847615945,2.60118695119756,1.15106533222573,0.276350017785848,0.869409257205157,2.37258501059297,2.67540828089713,0,0.113309342697566,2.68254345521345,3.09264700934367,2.27717722817553,0.637130828648193,0,0.950452044448374,1.35517607169996,1.02389288923535,0,0.710331756132051,0,3.62892137804518,2.13952156626806,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0.087834785693126,41.0619401685329,4.73583874780305,4.07862887062872,59.0676256451524,75.572305987882,49.7262772340556,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,3.35941786920128,4.98072767761394,12.0499420595281,22.1556124410031,23.5684352772739,37.5855568624181,3.67663080345869,0.81014194788176,1.69669483739752,1.79623498100936,1.68917220724983,0,0,0,6.58902087180316,7.75560528296651,3.92484646928281,0,0,0,0.573673241497627,0,0,0,0,0,0.808264032418128,0.326923806226917,0,0,3.98346434117454,0,0,0,0,0,0,0.204154171254893,0,0.309977343527296,0,0,0.910161361938026,0.718618141816238,0,0,0.277064115484183,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,8.18238361772504,2.58124135850103,0.609868530647977,0,0.464775771478074,1.24393266018445,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0,0,0,0,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,1.96781501668982,0,0.439001141634502,6.74410519545717,3.9206299240536,2.40729957412177,10.4258657699304,0,0,0.115930404975077,0.117408694235822,163.422818865536,73.6146964996811,94.1758053561261,1.58040879591855,1.71697232418975,0,1.8720341211139,0,0,3.19166043577833,8.79005602902796,1.25381931783988,1.16253575405585,2.68367875415648,3.4486426652716,0,1.03664057770386,0.144119953416961,1.51490920111656,0,0,0,11.9750712215894,0,0,0,0.224262168690721,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,1.57624608161542,0.862510299438069,1.66845947163673,0,1.30139853857622,0,0.167516265334349,0,3.74503511973591,2.99161459204025,8.28831026872071,0,0,3.52644530809656,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.07857100409308,2.34800627167578,1.21251028578504,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,0,2.1754700926492,0.200506470303285,47.6058712798584,0.114814448164607,0.182091168006717,0.131124414959424,2.70719767744447,0.770153371044148,0.784349769176855,0,0.316654886678627,0,0.850468526382578,2.15915916102139,7.71136263451447,0,0,2.80363900349542,3.3243040357149,0,0,0,0,0,3.25378394664303,55.9512693247132,0,0,14.3566384499043,12.3511446746939,0,0.386682873168488,0,0,0,0.107420244868274,0,0.255679882248303,0.178064071293475,12.2310837367124,16.5283457933991,3.31793052485919,98.8311518958723,0,0.31481234683064,0.6970372701606,2.46426864140871,0,0.869932992075073,0.55597265731176,0,0,0,0,0,4.2793898803392,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,15.5976633364022,2.11300293513511,0,0,0,0,1.32687795048244,2.19225442626881,0,0,0,1.239293992399,0,0,0.196498082026242,0,0,0,0,0.379473173765715,1.74967360122491,4.52243929809907,0.670302275535787,1.08890984861323,48.9547764039252,2.15252686335615,3.36942951335251,0.443430153536676,1.1486170010348,1.01489521846434,2.29391162142713,0.569647187174163,0.238231775457789,1.23408681925858,0.648473311192717,1.62009431171434,0.79312517629427,0,0,4.90080431962063,0,0,0,3.18852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55567026775618,0.439524537815682,0.242721043499027,0,0,0,0.296964680832639,1.22864280839693,0,0,0.779160935160341,0,0,0.996239941255349,39.232316005423,0,0,21.0475017338429,0,5.30223271769228,14.1426727993731,0,0.986434056369336,4.7896618469388,0,0,0,0,2.60427761085233,0,0,17.4103975876814,1.77977555204936,2.6002644994473,0.689486746482929,0,0.694499979733169,0,0,0,0,0,0.219385397153973,0,123.8082849194,1.00035336054936,0,14.0643981676717,2.33369875465408,22.9245954755437,0.31900115973192,0,1.06606955203727,0,0,0,0.225595660617181,0.19606253431774,0,0,0,1.68798451622422,1.30586246527318,0.565412285735763,0,5.97157158647103,0.973033209536731,5.49927130440263,0,0,0,0.134802265961354,1.60515529459758,0,0.182454789215666,43.4375454029239,1.94224303627274,1.18375320854817,7.25944296291983,0,2.78020950365347,3.30711522711884,0.103688191397247,0,0,0.941798755221676,0,33.014707339456,0,0,16.5607151630298,1.21882889212564,1.57254001417827,1.0319161948297,0,0,0,3.9765496760252,44.2163194724416,0.451961481561065,0,0.596143835108969,0,47.9100887700267,0.721429382263803,1.70762395791482,3.9961921916426,47.1175664093927,9.62107407793692,0.343189995723929,0,0,2.59263438078475,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0.229160424011684,0,27.1563440678628,0,0,0,0,22.1342304102162,0,0.164831716762333,0,1.87012214878023,0.931406652723629,0,0,0,0.275078873194468,0,367.157391012049,58.8089485464042,0.0607495566580247,1.0063040627978,0.788057072991982,0.314727528809989,0.528001682597033,0,113.421881615792,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,1.01980882368113,0.58620893471233,0,0,0,4.44825778499256,5.63852017853338,295.373983162243,904.867980153677,450.277853162402,28.2814632432812,0,0.487170393523584,126.391569038496,0,0,0.306345576763462,0,69.2608564463533,0,0,0,0,0.110929051536852,1.42821726765182,0,0,0,0,1.6468607378872,0,0,0,0,0,0,0,0,1.14420034198462,0,0,0.147855149989634,0.159296767163702,9.8956684675993,0,0,0,1.04349012362347,0,0,0.406870733204662,0,0.322231671127465,0,0.398095888698616,0,0,0,0,3.46715694733146,100.57310635484,12.0057374303997,0,0,9.0552580667393,0,5.86722749605847,0.438568099157414,0.353378291891762,0.771656153083659,3.54779125371453,0,2.41801239211839,0.303859956177382,0,2765.65236335744,1108.49136273439,2673.96706529454,4.25892803500336,0,21.7651487059386,0.999936979274649,0,3.2720846135555,0,0,31.3330097291556,12.4415452006595,0.255788742607303,0,3.77438260454151,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,21.3962026332236,2.00548529691159,10.8222873127791,0.924205329202706,0,0,0,0.752103283492572,0,7.03362610109783,6.54766736203556,23.9106999564741,16.7077377425261,0.0675375846183947,0,0,0,0,9.3203820365721,0.992422356778588,0,96.9716825784528,0,0,0.606965604236632,0.682986574053893,1.33053555243958,24.544839349381,0,0,0,1.30013224972365,3.67063626243828,1.80534113556182,0,39.5183750272443,3.65263488203798,0,0.47775168788705,0.214429632529969,0,0,1.56472445072321,0,0.207216164163037,0,0,5.16272830584333,0,0.170426809518315,3.81048345171836,8.01874039904175,0,0,0.894843454382338,69.5885156332073,1.5849330247695,0,0,0,1.45713297917742,0.467878926924211,0.994753875806841,0.118920090777569,3.04954421505192,0,71.5563878506033,1.69783147837478,5.02686989159102,8.93602863086893,0.245148321753905,102.519297989207,0,0.297046400327086,0.4226557275834,0.169927114687817,2.81951753939561,9.47530953211585,871.386938509455,81.2420420655742,7.41079230602953,2.08627553391837,2.92134555298607,6.88093925106811,0,0.631086248772738,0,0,10.0515099697926,0,0,0,0.126166424835079,0.327796715891087,0.126698501011437,8.26109520910052,58.5206117531577,13.3247604325525,5.51556586443225,0.227336094654718,0.535928260312357,0,0,3.19850972851471,0.952257725854961,45.9873038032364,29.8579375763077,0.224263725161227,17.9484986344425,1.0105859447911,6.7492191848058,0.684466602170562,25.7284842515724,8.39149803094313,0.665320713092027,4.23296996777067,8.53818767021724,0,1.70667884002515,11.7320471201727,0.244482888365733,0,0,27.3732359283796,150.026054397913 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,7.39557661096953,1.20538905604795,0,0.975865597581014,0,0,0.940364164434263,0,0,0,29.1899209957174,24.8764786033336,23.1409697062217,1.18009283054671,0.383829398097213,0.154816123316076,0,0,11.8321283253372,0,0,0.587200878669695,6.64794490238253,9.82667792603694,4.77423915574874,0.895661896959697,0.971680998056939,0,0,1.13362783106643,0.485168122375632,1.62700325833979,8.63452564845834,9.91060386864331,9.20615655430881,11.2710710872804,15.6078271726466,28.958637181876,42.6019891165325,54.1705946377367,0.752969358170419,1.36453075028923,1.34834090667051,19.8954530041087,35.3021929783703,38.9995646737415,4.94776950280074,5.78444607102732,7.2458207590558,43.5313857942876,98.1576438715672,110.862360321212,2.00998932205395,4.69334626578181,7.60160956467908,42.9833646869692,120.058509331946,121.5215567773,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0,0,2.84606484554724,0,0,0,8.40762844472304,0,4.72103448273199,1.57204305099666,2.05601498999509,0.501559486172034,4.56291173287027,5.20792586308207,1.94826728407911,0.779873198196215,3.24066498222321,2.43687284041983,4.60366568400527,1.79327847615945,2.60118695119756,1.15106533222573,0.276350017785848,0.869409257205157,2.37258501059297,2.67540828089713,0,0.113309342697566,2.68254345521345,3.09264700934367,2.27717722817553,0.637130828648193,0,0.950452044448374,1.35517607169996,1.02389288923535,0,0.710331756132051,0,3.62892137804518,2.13952156626806,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0.087834785693126,41.0619401685329,4.73583874780305,4.07862887062872,59.0676256451524,75.572305987882,49.7262772340556,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,3.35941786920128,4.98072767761394,12.0499420595281,22.1556124410031,23.5684352772739,37.5855568624181,3.67663080345869,0.81014194788176,1.69669483739752,1.79623498100936,1.68917220724983,0,0,0,6.58902087180316,7.75560528296651,3.92484646928281,0,0,0,0.573673241497627,0,0,0,0,0,0.808264032418128,0.326923806226917,0,0,3.98346434117454,0,0,0,0,0,0,0.204154171254893,0,0.309977343527296,0,0,0.910161361938026,0.718618141816238,0,0,0.277064115484183,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,8.18238361772504,2.58124135850103,0.609868530647977,0,0.464775771478074,1.24393266018445,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0,0,0,0,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,1.96781501668982,0,0.439001141634502,6.74410519545717,3.9206299240536,2.40729957412177,10.4258657699304,0,0,0.115930404975077,0.117408694235822,163.422818865536,73.6146964996811,94.1758053561261,1.58040879591855,1.71697232418975,0,1.8720341211139,0,0,3.19166043577833,8.79005602902796,1.25381931783988,1.16253575405585,2.68367875415648,3.4486426652716,0,1.03664057770386,0.144119953416961,1.51490920111656,0,0,0,11.9750712215894,0,0,0,0.224262168690721,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,1.57624608161542,0.862510299438069,1.66845947163673,0,1.30139853857622,0,0.167516265334349,0,3.74503511973591,2.99161459204025,8.28831026872071,0,0,3.52644530809656,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.07857100409308,2.34800627167578,1.21251028578504,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,0,2.1754700926492,0.200506470303285,47.6058712798584,0.114814448164607,0.182091168006717,0.131124414959424,2.70719767744447,0.770153371044148,0.784349769176855,0,0.316654886678627,0,0.850468526382578,2.15915916102139,7.71136263451447,0,0,2.80363900349542,3.3243040357149,0,0,0,0,0,3.25378394664303,55.9512693247132,0,0,14.3566384499043,12.3511446746939,0,0.386682873168488,0,0,0,0.107420244868274,0,0.255679882248303,0.178064071293475,12.2310837367124,16.5283457933991,3.31793052485919,98.8311518958723,0,0.31481234683064,0.6970372701606,2.46426864140871,0,0.869932992075073,0.55597265731176,0,0,0,0,0,4.2793898803392,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,15.5976633364022,2.11300293513511,0,0,0,0,1.32687795048244,2.19225442626881,0,0,0,1.239293992399,0,0,0.196498082026242,0,0,0,0,0.379473173765715,1.74967360122491,4.52243929809907,0.670302275535787,1.08890984861323,48.9547764039252,2.15252686335615,3.36942951335251,0.443430153536676,1.1486170010348,1.01489521846434,2.29391162142713,0.569647187174163,0.238231775457789,1.23408681925858,0.648473311192717,1.62009431171434,0.79312517629427,0,0,4.90080431962063,0,0,0,3.18852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55567026775618,0.439524537815682,0.242721043499027,0,0,0,0.296964680832639,1.22864280839693,0,0,0.779160935160341,0,0,0.996239941255349,39.232316005423,0,0,21.0475017338429,0,5.30223271769228,14.1426727993731,0,0.986434056369336,4.7896618469388,0,0,0,0,2.60427761085233,0,0,17.4103975876814,1.77977555204936,2.6002644994473,0.689486746482929,0,0.694499979733169,0,0,0,0,0,0.219385397153973,0,123.8082849194,1.00035336054936,0,14.0643981676717,2.33369875465408,22.9245954755437,0.31900115973192,0,1.06606955203727,0,0,0,0.225595660617181,0.19606253431774,0,0,0,1.68798451622422,1.30586246527318,0.565412285735763,0,5.97157158647103,0.973033209536731,5.49927130440263,0,0,0,0.134802265961354,1.60515529459758,0,0.182454789215666,43.4375454029239,1.94224303627274,1.18375320854817,7.25944296291983,0,2.78020950365347,3.30711522711884,0.103688191397247,0,0,0.941798755221676,0,33.014707339456,0,0,16.5607151630298,1.21882889212564,1.57254001417827,1.0319161948297,0,0,0,3.9765496760252,44.2163194724416,0.451961481561065,0,0.596143835108969,0,47.9100887700267,0.721429382263803,1.70762395791482,3.9961921916426,47.1175664093927,9.62107407793692,0.343189995723929,0,0,2.59263438078475,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0.229160424011684,0,27.1563440678628,0,0,0,0,22.1342304102162,0,0.164831716762333,0,1.87012214878023,0.931406652723629,0,0,0,0.275078873194468,0,367.157391012049,58.8089485464042,0.0607495566580247,1.0063040627978,0.788057072991982,0.314727528809989,0.528001682597033,0,113.421881615792,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,1.01980882368113,0.58620893471233,0,0,0,4.44825778499256,5.63852017853338,295.373983162243,904.867980153677,450.277853162402,28.2814632432812,0,0.487170393523584,126.391569038496,0,0,0.306345576763462,0,69.2608564463533,0,0,0,0,0.110929051536852,1.42821726765182,0,0,0,0,1.6468607378872,0,0,0,0,0,0,0,0,1.14420034198462,0,0,0.147855149989634,0.159296767163702,9.8956684675993,0,0,0,1.04349012362347,0,0,0.406870733204662,0,0.322231671127465,0,0.398095888698616,0,0,0,0,3.46715694733146,100.57310635484,12.0057374303997,0,0,9.0552580667393,0,5.86722749605847,0.438568099157414,0.353378291891762,0.771656153083659,3.54779125371453,0,2.41801239211839,0.303859956177382,0,2765.65236335744,1108.49136273439,2673.96706529454,4.25892803500336,0,21.7651487059386,0.999936979274649,0,3.2720846135555,0,0,31.3330097291556,12.4415452006595,0.255788742607303,0,3.77438260454151,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,21.3962026332236,2.00548529691159,10.8222873127791,0.924205329202706,0,0,0,0.752103283492572,0,7.03362610109783,6.54766736203556,23.9106999564741,16.7077377425261,0.0675375846183947,0,0,0,0,9.3203820365721,0.992422356778588,0,96.9716825784528,0,0,0.606965604236632,0.682986574053893,1.33053555243958,24.544839349381,0,0,0,1.30013224972365,3.67063626243828,1.80534113556182,0,39.5183750272443,3.65263488203798,0,0.47775168788705,0.214429632529969,0,0,1.56472445072321,0,0.207216164163037,0,0,5.16272830584333,0,0.170426809518315,3.81048345171836,8.01874039904175,0,0,0.894843454382338,69.5885156332073,1.5849330247695,0,0,0,1.45713297917742,0.467878926924211,0.994753875806841,0.118920090777569,3.04954421505192,0,71.5563878506033,1.69783147837478,5.02686989159102,8.93602863086893,0.245148321753905,102.519297989207,0,0.297046400327086,0.4226557275834,0.169927114687817,2.81951753939561,9.47530953211585,871.386938509455,81.2420420655742,7.41079230602953,2.08627553391837,2.92134555298607,6.88093925106811,0,0.631086248772738,0,0,10.0515099697926,0,0,0,0.126166424835079,0.327796715891087,0.126698501011437,8.26109520910052,58.5206117531577,13.3247604325525,5.51556586443225,0.227336094654718,0.535928260312357,0,0,3.19850972851471,0.952257725854961,45.9873038032364,29.8579375763077,0.224263725161227,17.9484986344425,1.0105859447911,6.7492191848058,0.684466602170562,25.7284842515724,8.39149803094313,0.665320713092027,4.23296996777067,8.53818767021724,0,1.70667884002515,11.7320471201727,0.244482888365733,0,0,27.3732359283796,150.026054397913 | ||
|short_description=p1@LAMP3 | |short_description=p1@LAMP3 | ||
}} | }} |
Revision as of 21:06, 31 July 2012
Short description: | p1@LAMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LAMP3_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 138bp_to_NM_014398, uc003flh.3_5end |
EntrezGene: | LAMP3 |
HGNC: | 14582 |
UniProt: | Q9UQV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.