FFCP PHASE1:Hg19::chr17:39780497..39780517,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr17:39780497..39780517,+ | |id=chr17:39780497..39780517,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.31e-33!43;CL:0000066!6.60e-33!254;CL:0000223!2.76e-22!59;CL:0002368!1.01e-21!13;CL:0002159!9.01e-17!13;CL:0002251!1.26e-15!21;CL:0002202!3.84e-13!9;CL:0002632!3.84e-13!9;CL:0000622!7.66e-12!5;CL:0000244!5.92e-10!4;CL:0000731!5.92e-10!4;CL:0000154!8.57e-10!6;CL:0002328!8.25e-09!3;CL:0000068!1.61e-08!3;CL:0000069!1.61e-08!3;CL:0000307!1.61e-08!3;CL:0000377!1.61e-08!3;CL:0000063!3.83e-08!578;CL:0002621!6.27e-08!3;CL:0002077!6.66e-08!33;CL:0002623!8.68e-08!3;CL:0002166!1.51e-07!3;CL:0000362!1.51e-07!8;CL:0000240!5.53e-07!6;CL:0000311!5.53e-07!6;CL:0000079!5.53e-07!6;CL:0000237!5.53e-07!6;CL:0000036!5.53e-07!6;CL:0000357!5.53e-07!6;CL:0000114!5.53e-07!6 | |ontology_enrichment_celltype=CL:0002076!1.31e-33!43;CL:0000066!6.60e-33!254;CL:0000223!2.76e-22!59;CL:0002368!1.01e-21!13;CL:0002159!9.01e-17!13;CL:0002251!1.26e-15!21;CL:0002202!3.84e-13!9;CL:0002632!3.84e-13!9;CL:0000622!7.66e-12!5;CL:0000244!5.92e-10!4;CL:0000731!5.92e-10!4;CL:0000154!8.57e-10!6;CL:0002328!8.25e-09!3;CL:0000068!1.61e-08!3;CL:0000069!1.61e-08!3;CL:0000307!1.61e-08!3;CL:0000377!1.61e-08!3;CL:0000063!3.83e-08!578;CL:0002621!6.27e-08!3;CL:0002077!6.66e-08!33;CL:0002623!8.68e-08!3;CL:0002166!1.51e-07!3;CL:0000362!1.51e-07!8;CL:0000240!5.53e-07!6;CL:0000311!5.53e-07!6;CL:0000079!5.53e-07!6;CL:0000237!5.53e-07!6;CL:0000036!5.53e-07!6;CL:0000357!5.53e-07!6;CL:0000114!5.53e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.43e-38;13!CL:0002076;4.08e-27;42!CL:0002202;7.78e-21;9!CL:0002632;7.78e-21;9!CL:0002328;6.62e-17;3!CL:0002159;1.14e-16;14!CL:0000307;2.03e-16;3!CL:0000240;9.35e-14;6!CL:0000311;9.35e-14;6!CL:0000079;9.35e-14;6!CL:0000237;9.35e-14;6!CL:0000244;8.66e-12;4!CL:0000731;8.66e-12;4!CL:0002327;1.00e-11;4!CL:0000575;5.26e-11;2!CL:0000312;9.82e-10;5!CL:0000622;1.70e-09;5!CL:0002077;2.26e-09;34!CL:0000362;3.32e-09;9!CL:0002251;1.83e-08;20!CL:0000154;5.48e-08;6!CL:0002231;7.28e-08;3!CL:0002621;1.71e-07;3!CL:0002623;1.71e-07;3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.03e-16;3!CL:0000223;3.90e-14;58!CL:0000357;9.35e-14;6!CL:0000114;9.35e-14;6 | |||
|ontology_enrichment_disease=DOID:1749!2.74e-11!14;DOID:305!1.75e-08!106 | |ontology_enrichment_disease=DOID:1749!2.74e-11!14;DOID:305!1.75e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_uberon=UBERON:0001004!8.68e-28!72;UBERON:0004119!9.35e-23!169;UBERON:0000925!9.35e-23!169;UBERON:0006595!9.35e-23!169;UBERON:0000065!1.87e-22!53;UBERON:0000072!4.47e-18!46;UBERON:0008947!3.38e-15!38;UBERON:0003258!3.38e-15!38;UBERON:0001737!1.20e-14!9;UBERON:0001007!4.24e-14!155;UBERON:0001555!4.24e-14!155;UBERON:0007026!4.24e-14!155;UBERON:0001557!7.87e-14!19;UBERON:0000077!8.72e-13!130;UBERON:0007196!1.80e-12!14;UBERON:0001558!1.80e-12!14;UBERON:0000365!9.84e-12!5;UBERON:0005631!1.76e-11!14;UBERON:0000158!1.76e-11!14;UBERON:0001041!1.76e-11!98;UBERON:0000166!1.07e-10!21;UBERON:0004921!4.87e-10!129;UBERON:0004185!4.87e-10!129;UBERON:0005910!1.05e-09!6;UBERON:0000064!1.33e-09!219;UBERON:0000161!1.76e-09!35;UBERON:0000165!4.82e-09!28;UBERON:0000930!4.82e-09!28;UBERON:0004815!8.25e-09!3;UBERON:0002031!8.25e-09!3;UBERON:0003126!2.79e-08!7;UBERON:0001005!2.79e-08!7;UBERON:0001949!6.27e-08!3;UBERON:0000305!6.76e-08!7;UBERON:0005178!1.83e-07!34;UBERON:0002224!1.83e-07!34;UBERON:0003729!2.29e-07!5;UBERON:0000063!3.00e-07!97;UBERON:0005181!3.57e-07!35;UBERON:0000062!5.13e-07!511;UBERON:0003102!5.18e-07!95;UBERON:0001723!6.21e-07!3;UBERON:0001033!6.21e-07!3;UBERON:0010056!6.21e-07!3;UBERON:0004871!7.39e-07!8 | |ontology_enrichment_uberon=UBERON:0001004!8.68e-28!72;UBERON:0004119!9.35e-23!169;UBERON:0000925!9.35e-23!169;UBERON:0006595!9.35e-23!169;UBERON:0000065!1.87e-22!53;UBERON:0000072!4.47e-18!46;UBERON:0008947!3.38e-15!38;UBERON:0003258!3.38e-15!38;UBERON:0001737!1.20e-14!9;UBERON:0001007!4.24e-14!155;UBERON:0001555!4.24e-14!155;UBERON:0007026!4.24e-14!155;UBERON:0001557!7.87e-14!19;UBERON:0000077!8.72e-13!130;UBERON:0007196!1.80e-12!14;UBERON:0001558!1.80e-12!14;UBERON:0000365!9.84e-12!5;UBERON:0005631!1.76e-11!14;UBERON:0000158!1.76e-11!14;UBERON:0001041!1.76e-11!98;UBERON:0000166!1.07e-10!21;UBERON:0004921!4.87e-10!129;UBERON:0004185!4.87e-10!129;UBERON:0005910!1.05e-09!6;UBERON:0000064!1.33e-09!219;UBERON:0000161!1.76e-09!35;UBERON:0000165!4.82e-09!28;UBERON:0000930!4.82e-09!28;UBERON:0004815!8.25e-09!3;UBERON:0002031!8.25e-09!3;UBERON:0003126!2.79e-08!7;UBERON:0001005!2.79e-08!7;UBERON:0001949!6.27e-08!3;UBERON:0000305!6.76e-08!7;UBERON:0005178!1.83e-07!34;UBERON:0002224!1.83e-07!34;UBERON:0003729!2.29e-07!5;UBERON:0000063!3.00e-07!97;UBERON:0005181!3.57e-07!35;UBERON:0000062!5.13e-07!511;UBERON:0003102!5.18e-07!95;UBERON:0001723!6.21e-07!3;UBERON:0001033!6.21e-07!3;UBERON:0010056!6.21e-07!3;UBERON:0004871!7.39e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.62e-17;3!UBERON:0002031;6.62e-17;3!UBERON:0007196;2.97e-12;15!UBERON:0001558;2.97e-12;15!UBERON:0001911;1.00e-11;4!UBERON:0000065;6.16e-11;44!UBERON:0002185;2.49e-10;5!UBERON:0000486;3.87e-10;12!UBERON:0000365;1.58e-09;5!UBERON:0005911;2.54e-09;36!UBERON:0005178;2.82e-08;34!UBERON:0002224;2.82e-08;34!UBERON:0005910;5.15e-08;6!UBERON:0005181;5.49e-08;35!UBERON:0004807;6.50e-08;22!UBERON:0001004;1.47e-07;65!UBERON:0001949;1.71e-07;3!UBERON:0000485;1.72e-07;7!UBERON:0003126;2.73e-07;7!UBERON:0001005;2.73e-07;7!UBERON:0000072;3.24e-07;37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1136334692682,7.228942050678,6.28581817283539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709446689665756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,1.09288586487763,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54141078213801,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89891279744945,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.882351781859152,0.217879444092406,1.18635309555548,0.943819157121151,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0,0,9.98727597218493,2.24803506515239,1.70899253099772,2.77765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.839910640994298,0.425325291727159,1.43293636324557,1.45316969256981,5.75074018747817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9125925720653,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6065841139427,6.35358823657685,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,2.60024098414608,0,0,0,0,0,0,0,0,0,6.28082678371717,3.0750410778417,1.78657797492418,2.8324178639554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48466042535419,10.0545341330368,2.17781969722645,0,1.29151611801369,1.68471475667626,6.20802214951346,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,1.18785872333055,0.921482106297696,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0.435296032902013,0,0,0.290268993867255,0,0.164230914106418,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,2.82832841540154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01891218839339,0,0,0,0,2.49489756515279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.43445735509445,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.733714394086716,0.577628330751691,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27937780579341,0.6828739083758,1.38251932362818,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92818664932447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0.342233301085281,0,0.143444410785353,0.332660356546013,0.407016343054873,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1136334692682,7.228942050678,6.28581817283539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709446689665756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,1.09288586487763,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54141078213801,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89891279744945,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.882351781859152,0.217879444092406,1.18635309555548,0.943819157121151,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0,0,9.98727597218493,2.24803506515239,1.70899253099772,2.77765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.839910640994298,0.425325291727159,1.43293636324557,1.45316969256981,5.75074018747817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9125925720653,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6065841139427,6.35358823657685,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,2.60024098414608,0,0,0,0,0,0,0,0,0,6.28082678371717,3.0750410778417,1.78657797492418,2.8324178639554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48466042535419,10.0545341330368,2.17781969722645,0,1.29151611801369,1.68471475667626,6.20802214951346,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,1.18785872333055,0.921482106297696,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0.435296032902013,0,0,0.290268993867255,0,0.164230914106418,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,2.82832841540154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01891218839339,0,0,0,0,2.49489756515279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.43445735509445,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.733714394086716,0.577628330751691,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27937780579341,0.6828739083758,1.38251932362818,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92818664932447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0.342233301085281,0,0.143444410785353,0.332660356546013,0.407016343054873,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:39780497..39780517,+ | |short_description=p@chr17:39780497..39780517,+ | ||
}} | }} |
Revision as of 11:25, 14 August 2012
Short description: | p@chr17:39780497..39780517, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:39780497..39780517, + |
Coexpression cluster: | C544_nasal_Keratinocyte_Esophageal_Urothelial_Placental_Corneal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.