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MacroAPE 1083:CNhs11279 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;560.8620931610902;165.3510039053229;202.42154722179134;109.16836751614187!2;185.35587126565332;201.24750397671042;541.3333984996841;109.8662...")
 
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32333!12177-128I8;0.00469271!12182-129A4;0.000754366!12183-129A5;0.00623936!12184-129A6;0.00225895!10809-111A8;0.00304015!10597-108E3;0.0497034!10717-109I6;0.0262932!10455-106G5;0.305253!10534-107G3;0.0313811!10429-106D6;0.024614!10464-106H5;0.0578616!10827-111C8;0.0367394!10789-110H6;0.135828!10828-111C9;0.456221!10788-110H5;0.462612!10792-110H9;0.0935911!10765-110E9;0.184272!10829-111D1;0.0277484!10830-111D2;0.226731!10831-111D3;0.0391599!10832-111D4;0.114422!10833-111D5;0.073983!10764-110E8;0.0686458!10770-110F5;0.00781844!10399-106A3;0.0943201!10400-106A4;0.0511955!10405-106A9;0.0264691!10834-111D6;0.0363262!10835-111D7;0.157091!10836-111D8;0.0013208!10837-111D9;0.00904378!10699-109G6;0.159411!10802-111A1;0.119221!10796-110I4;0.221262!10010-101C1;0.011171!10810-111A9;3.67945e-05!10421-106C7;0.014632!10708-109H6;0.039257!12235-129G3;0.0011299!12236-129G4;0.0221506!12237-129G5;0.107136!10167-103B5;0.00335345!10151-102I7;0.280481!10428-106D5;0.352257!10795-110I3;0.0350288!10805-111A4;0.00484551!10052-101G7;4.72669e-05!10189-103D9;0.00328357!10589-108D4;0.00490845!10425-106D2;0.0233314!10427-106D4;0.005421!10702-109G9;0.00601631!10432-106D9;0.0215043!10496-107C1;0.0332563!10718-109I7;0.367875!10011-101C2;0.0587671!10053-101G8;0.00786778!10686-109F2;0.0239169!10084-102B3;0.668918!10012-101C3;0.403476!10085-102B4;0.400689!10482-107A5;0.16128!10419-106C5;6.64791e-05!10080-102A8;6.87582e-06!10760-110E4;0.0212993!10709-109H7;0.334631!10710-109H8;0.0246203!10703-109H1;0.0210497!10719-109I8;0.0289363!10642-109A3;0.0028146!10177-103C6;0.00137668!10164-103B2;0.600288!10173-103C2;0.487241!10166-103B4;0.0583798!10083-102B2;0.118759!10188-103D8;0.14064!10552-107I3;0.370281!10553-107I4;0.0475523!10013-101C4;0.017372!10536-107G5;0.00561283!10618-108G6;0.000524185!10423-106C9;0.0208954!10785-110H2;0.0102161!12238-129G6;0.0220299!12239-129G7;0.910127!12240-129G8;0.00715864!10416-106C2;0.388966!10801-110I9;0.27841!10766-110F1;0.0767468!10824-111C5;0.159842!10825-111C6;0.0344591!10826-111C7;0.0391462!10454-106G4;0.0416192!10409-106B4;0.00745297!10638-108I8;0.086408!10636-108I6;0.0444146!10513-107D9;0.11038!10420-106C6;0.148167!10082-102B1;0.00254916!10014-101C5;0.0494766!10070-101I7;0.000944986!10452-106G2;0.0153538!10453-106G3;0.00256128!10449-106F8;0.00339219!10042-101F6;0.00389117!10069-101I6;0.945675!10193-103E4;0.000499059!10631-108I1;0.459349!10438-106E6;0.0585948!10488-107B2;0.0192303!10196-103E7;0.00153272!10071-101I8;0.145279!10071-101I8;0.00809827!10041-101F5;0.0462021!10451-106G1;0.00263951!10450-106F9;0.00013904!10604-108F1;5.40984e-05!10605-108F2;0.00113506!10606-108F3;0.0246572!10603-108E9;0.00233986!10497-107C2;0.0175606!10448-106F7;0.526483!10643-109A4;0.0891013!10426-106D3;0.0199791!10431-106D8;0.126572!10197-103E8;0.0117605!10443-106F2;0.000477899!10815-111B5;0.2119!10816-111B6;0.0531009!10817-111B7;0.0121851!10015-101C6;0.0455603!10410-106B5;0.00540173!10054-101G9;0.0556099!10758-110E2;0.0215222!10711-109H9;0.173011!10040-101F4;0.0479763!10470-106I2;0.236057!10415-106C1;0.127553!10198-103E9;0.28688!10614-108G2;0.00513845!10612-108F9;0.00897562!10549-107H9;0.0127385!10615-108G3;0.000331668!10487-107B1;0.00185702!10433-106E1;0.0583643!10688-109F4;0.124107!10444-106F3;0.141603!10444-106F3;0.411293!10485-107A8;0.494466!10413-106B8;0.103239!10175-103C4;0.0827238!10161-103A8;0.448994!12131-128D7;0.875244!10624-108H3;0.0210836!10712-109I1;0.0841748!10205-103F7;0.199641!10206-103F8;0.00361567!10207-103F9;0.00601085!10050-101G5;0.0701127!10051-101G6;0.0475605!10016-101C7;0.0154396!10046-101G1;0.00300117!10778-110G4;0.00138175!10633-108I3;0.14182!10818-111B8;0.00316666!10819-111B9;0.18424!10820-111C1;0.291716!10484-107A7;0.13518!10808-111A7;0.0025696!10169-103B7;0.0112695!10153-102I9;0.375236!13425-144D5;0.641314!13433-144E4;0.0999533!13437-144E8;0.109747!11904-125F5;0.0712177!11905-125F6;0.105006!10039-101F3;0.0555149!10791-110H8;0.288246!10017-101C8;0.334933!10045-101F9;0.00352185!10509-107D5;0.0116221!10839-111E2;0.569692!10692-109F8;0.917747!10079-102A7;0.00484066!10078-102A6;0.00233353!10721-110A1;0.0149618!10569-108B2;0.135134!10570-108B3;0.0739016!10571-108B4;0.0364169!10647-109A8;0.097023!10752-110D5;0.11865!10782-110G8;0.0319559!10726-110A6;0.92772!10018-101C9;0.125957!10086-102B5;0.0130025!10182-103D2;0.00741422!10165-103B3;0.337019!10499-107C4;0.920411!10408-106B3;0.04834!10019-101D1;0.740007!10068-101I5;0.000522066!10075-102A3;0.000384144!10077-102A5;0.000570884!10727-110A7;2.40374e-08!10775-110G1;0.0165508!10412-106B7;0.0425655!12231-129F8;0.0126612!12232-129F9;0.358258!12233-129G1;0.924617!12234-129G2;0.934905!10414-106B9;0.308305!10170-103B8;0.00488371!10183-103D3;0.22188!10150-102I6;0.20498!10174-103C3;0.379485!10155-103A2;0.756525!10038-101F2;0.68046!10838-111E1;0.742052!10759-110E3;0.00848848!10514-107E1;3.35761e-05!10465-106H6;5.17845e-05!10691-109F7;0.000589095!10843-111E6;0.591111!10844-111E7;0.0014802!11747-123G1;0.0260645!11748-123G2;0.0205423!11749-123G3;0.0604399!11750-123G4;0.0168947!11751-123G5;0.0799303!11840-124H4;0.0159359!11752-123G6;0.0118695!11753-123G7;0.0244734!11754-123G8;0.143687!11755-123G9;0.0498078!11756-123H1;0.338583!11833-124G6;0.095672!11760-123H5;0.109615!11836-124G9;0.097233!11758-123H3;0.0476097!11835-124G8;0.0390774!11762-123H7;0.00188774!11838-124H2;0.0356418!11757-123H2;0.166622!11759-123H4;0.285344!11761-123H6;0.145403!11842-124H6;0.0958556!11837-124H1;0.52934!10568-108B1;0.0246734!13230-141I8;0.922912!13231-141I9;0.0235953!10696-109G3;0.011528!10493-107B7;0.0763252!10494-107B8;0.00119309!10850-111F4;0.501576!10851-111F5;0.517343!10852-111F6;0.983064!10853-111F7;0.764166!10854-111F8;0.0572351!10855-111F9;0.489113!10856-111G1;0.194348!10847-111F1;0.130371!10846-111E9;0.0299331!10848-111F2;0.173581!10845-111E8;0.466058!10857-111G2;0.0297784!10858-111G3;0.117296!10156-103A3;0.593452!11901-125F2;0.318134!11902-125F3;0.0822068!11903-125F4;0.00752923!10689-109F5;0.0803981!10648-109A9;0.753656!10784-110H1;0.0471668!10744-110C6;0.0172666!10772-110F7;0.10594!10474-106I6;0.00988913!10600-108E6;0.0682475!10684-109E9;0.109907!12226-129F3;0.00310764!12227-129F4;0.719841!10508-107D4;0.902281!10539-107G8;0.0113002!10607-108F4;0.00229164!10555-107I6;0.00267197!10774-110F9;0.000960011!10637-108I7;0.0373356!10663-109C6;0.00857972!10728-110A8;0.0151409!10729-110A9;0.00741463!10430-106D7;0.103964!10730-110B1;0.00250828!10813-111B3;0.0122056!10812-111B2;0.286222!10037-101F1;0.0598266!10172-103C1;0.368234!10163-103B1;0.167964!10076-102A4;0.293207!10073-102A1;0.223234!10036-101E9;0.0437166!10195-103E6;0.369327!10277-104E7;0.317603!10434-106E2;0.727499!10550-107I1;0.114976!10545-107H5;0.00810701!10544-107H4;0.457829!10704-109H2;0.0228179!10510-107D6;0.341026!10558-107I9;0.00383712!10020-101D2;0.00064836!10732-110B3;0.00586688!10049-101G4;0.321159!10698-109G5;0.527544!10437-106E5;0.00230723!10417-106C3;0.216113!10035-101E8;0.149331!10171-103B9;0.239923!10157-103A4;0.161487!10034-101E7;0.285469!10072-101I9;0.294945!10199-103F1;0.0263315!10200-103F2;0.00957689!10697-109G4;0.00248777!10723-110A3;0.0111929!10179-103C8;0.368912!10160-103A7;0.918665!10180-103C9;0.861746!10162-103A9;0.580794!10021-101D3;0.771487!10840-111E3;0.000113762!10706-109H4;0.000553845!10033-101E6;0.47053!10032-101E5;0.51851!10490-107B4;0.30481!10439-106E7;0.0191619!10022-101D4;0.100552!10176-103C5;0.00528415!10469-106I1;0.269494!10067-101I4;0.141382!10411-106B6;0.479061!10471-106I3;0.147338!10030-101E3;0.119861!10475-106I7;0.03844!10787-110H4;0.00221924!10477-106I9;0.00285839!10695-109G2;0.0229646!11771-123I7;0.712716!11772-123I8;0.239216!11773-123I9;0.0986195!10093-102C3;0.0853668!10442-106F1;0.0116261!10442-106F1;0.344936!10201-103F3;0.282774!10639-108I9;0.0362445!11843-124H7;0.0098225!11841-124H5;0.0117752!10693-109F9;0.0243853!10436-106E4;0.0862216!10483-107A6;0.0186814!10282-104F3;0.0942285!10023-101D5;0.129219!10066-101I3;0.00437845!10065-101I2;0.0027001!10800-110I8;0.00152261!10610-108F7;0.000769142!10841-111E4;3.8558e-05!10541-107H1;0.00533371!10842-111E5;0.00115085!10562-108A4;0.00711548!10024-101D6;0.0100741!10064-101I1;0.000115687!10609-108F6;0.0110538!10048-101G3;0.001777!10781-110G7;0.20135!10181-103D1;0.00152707!10159-103A6;0.794171!10056-101H2;0.899851!10737-110B8;0.727287!10025-101D7;0.0603263!10044-101F8;9.4055e-06!10424-106D1;0.00082243!10463-106H4;0.00539171!10616-108G4;0.00207587!10486-107A9;0.063103!10062-101H8;0.110799!10202-103F4;0.0545478!10158-103A5;0.00083167!10441-106E9;0.529477!10031-101E4;0.00560545!10063-101H9;0.446626!10063-101H9;0.0316851!11763-123H8;0.00824413!11765-123I1;0.021717!11768-123I4;0.0379664!10807-111A6;0.00798641!10790-110H7;0.0215295!10798-110I6;0.0504416!10786-110H3;0.0921068!10591-108D6;0.0939818!10593-108D8;0.0182616!10590-108D5;0.029645!10026-101D8;0.0262004!10096-102C6;0.110444!10168-103B6;0.141939!10154-103A1;0.525594!10209-103G2;0.744396!10061-101H7;0.000247859!10027-101D9;0.000629957!10043-101F7;0.575627!10783-110G9;0.109943!10028-101E1;0.0376516!10060-101H6;0.00558752!10203-103F5;0.00669547!10059-101H5;0.00494561!10047-101G2;0.00194551!10029-101E2;9.44454e-05!10058-101H4;7.42156e-05!10418-106C4;0.000247075!10492-107B6;0.0083477!10694-109G1;0.0293397!10797-110I5;0.500018!10057-101H3;0.0100567!10100-102D1;0.000542453!10055-101H1;0.0281839!10204-103F6;0.111287!10191-103E2;0.108162!10563-108A5;7.18985e-05
|name=CNhs11279_bu_f2
|name=CNhs11279_bu_f2
|tomtom_result=RUNX1#MA0002.2;0;0.000315529;0.150192;0.300383;11;AGACCTCAGGA;AAACCACAGAC;-!Zfp423#MA0116.1;0;0.00362263;1.72437;1;11;AGACCTCAGGA;GGCACCCAGGGGTGC;+!ADR1#MA0268.1;-2;0.00388025;1.847;1;7;AGACCTCAGGA;ACCCCAC;+!YPR022C#MA0436.1;-3;0.00737996;3.51286;1;7;AGACCTCAGGA;CCCCACG;+!Macho-1#MA0118.1;0;0.00780086;3.71321;1;9;AGACCTCAGGA;GAACCCCCA;-!EBF1#MA0154.1;-2;0.00793382;3.7765;1;9;AGACCTCAGGA;ACCCAAGGGA;+!PPARG::RXRA#MA0065.1;10;0.0110819;5.27498;1;10;AGACCTCAGGA;AGATGACCTTTGACCCCTGA;-!MIG1#MA0337.1;-2;0.0116912;5.56503;1;7;AGACCTCAGGA;CCCCCGC;+!Esrrb#MA0141.1;-2;0.0165116;7.85951;1;9;AGACCTCAGGA;AGCTCAAGGTCA;+!ARO80#MA0273.1;3;0.0170577;8.11948;1;11;AGACCTCAGGA;GATAATTCTCGGCAAGTATGT;+!YJL103C#MA0427.1;-2;0.0197815;9.41599;1;9;AGACCTCAGGA;AGCTCCGGAGA;+
}}
}}

Latest revision as of 12:13, 7 September 2012

Full Name: CNhs11279_bu_f2

Motif matrix
POACGT
1560.8620931610902165.3510039053229202.42154722179134109.16836751614187
2185.35587126565332201.24750397671042541.3333984996841109.8662380622986
3480.5288491761688235.67127343055864162.99710780636838158.60578139125107
472.34749778726504545.6948137809838203.47325368337806216.2874465527195
517.14227662539898973.741306547808922.39397524810983224.52545338302769
66.908698075495475478.4987488173073310.826589205591453541.5689757059522
73.60424401126944631019.35235056256999.9665433398025794.8798738907035375
8910.489206875190634.97272450481534664.2105878320351628.130492592304883
9349.45923324348996153.64426675896618476.351239870775658.34827193111516
10138.8338077033372171.54497135872066576.2706966127719151.15353612951685
11403.89120681404484205.99237729966183308.4423664692831119.47706122135708

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RUNX1#MA0002.200.0003155290.1501920.30038311AGACCTCAGGAAAACCACAGAC-
Zfp423#MA0116.100.003622631.72437111AGACCTCAGGAGGCACCCAGGGGTGC+
ADR1#MA0268.1-20.003880251.84717AGACCTCAGGAACCCCAC+
YPR022C#MA0436.1-30.007379963.5128617AGACCTCAGGACCCCACG+
Macho-1#MA0118.100.007800863.7132119AGACCTCAGGAGAACCCCCA-
EBF1#MA0154.1-20.007933823.776519AGACCTCAGGAACCCAAGGGA+
PPARG::RXRA#MA0065.1100.01108195.27498110AGACCTCAGGAAGATGACCTTTGACCCCTGA-
MIG1#MA0337.1-20.01169125.5650317AGACCTCAGGACCCCCGC+
Esrrb#MA0141.1-20.01651167.8595119AGACCTCAGGAAGCTCAAGGTCA+
ARO80#MA0273.130.01705778.11948111AGACCTCAGGAGATAATTCTCGGCAAGTATGT+
YJL103C#MA0427.1-20.01978159.4159919AGACCTCAGGAAGCTCCGGAGA+
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