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MacroAPE 1083:Motif890: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;110195;0;0!02;0;0;0;110195!03;0;110195;0;0!04;0;0;0;110195!05;0;49365;0;60830!06;0;110195;0;0 |macroape_1083_sample_pvalues=11376-118A8;...")
 
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0.82365!10788-110H5;0.878497!10792-110H9;0.73803!10765-110E9;0.882178!10829-111D1;0.585923!10830-111D2;0.742008!10831-111D3;0.871629!10832-111D4;0.928491!10833-111D5;0.675564!10764-110E8;0.83392!10770-110F5;0.634947!10399-106A3;0.987804!10400-106A4;0.879983!10405-106A9;0.858069!10834-111D6;0.927554!10835-111D7;0.981009!10836-111D8;0.540845!10837-111D9;0.449009!10699-109G6;0.66479!10802-111A1;0.62119!10796-110I4;0.839225!10010-101C1;0.76735!10810-111A9;0.273799!10421-106C7;0.341068!10708-109H6;0.860495!12235-129G3;0.356641!12236-129G4;0.215128!12237-129G5;0.374941!10167-103B5;0.353965!10151-102I7;0.432493!10428-106D5;0.630921!10795-110I3;0.249778!10805-111A4;0.340276!10052-101G7;0.27132!10189-103D9;0.371104!10589-108D4;0.430019!10425-106D2;0.364093!10427-106D4;0.81348!10702-109G9;0.868934!10432-106D9;0.908533!10496-107C1;0.369047!10718-109I7;0.93085!10011-101C2;0.743217!10053-101G8;0.581399!10686-109F2;0.763912!10084-102B3;0.861067!10012-101C3;0.589054!10085-102B4;0.586214!10482-107A5;0.422627!10419-106C5;0.971085!10080-102A8;0.519069!10760-110E4;0.0963123!10709-109H7;0.774568!10710-109H8;0.966433!10703-109H1;0.923789!10719-109I8;0.398937!10642-109A3;0.400939!10177-103C6;0.454223!10164-103B2;0.521475!10173-103C2;0.535164!10166-103B4;0.377152!10083-102B2;0.518703!10188-103D8;0.457928!10552-107I3;0.58794!10553-107I4;0.342555!10013-101C4;0.777169!10536-107G5;0.634566!10618-108G6;0.561858!10423-106C9;0.823416!10785-110H2;0.821461!12238-129G6;0.747408!12239-129G7;0.033056!12240-129G8;0.186626!10416-106C2;0.0465532!10801-110I9;0.667743!10766-110F1;0.868417!10824-111C5;0.805869!10825-111C6;0.0918526!10826-111C7;0.0903321!10454-106G4;0.0757444!10409-106B4;0.279578!10638-108I8;0.882522!10636-108I6;0.937555!10513-107D9;0.526262!10420-106C6;0.795309!10082-102B1;0.428261!10014-101C5;0.17923!10070-101I7;0.223662!10452-106G2;0.40676!10453-106G3;0.179148!10449-106F8;0.305382!10042-101F6;0.253728!10069-101I6;0.822385!10193-103E4;0.618959!10631-108I1;0.566793!10438-106E6;0.61611!10488-107B2;0.582763!10196-103E7;0.335773!10071-101I8;0.581355!10071-101I8;0.492393!10041-101F5;0.491395!10451-106G1;0.613982!10450-106F9;0.415652!10604-108F1;0.381657!10605-108F2;0.283895!10606-108F3;0.941019!10603-108E9;0.563756!10497-107C2;0.429586!10448-106F7;0.498785!10643-109A4;0.70673!10426-106D3;0.594207!10431-106D8;0.243204!10197-103E8;0.842189!10443-106F2;0.328728!10815-111B5;0.749541!10816-111B6;0.750949!10817-111B7;0.704896!10015-101C6;0.771511!10410-106B5;0.23424!10054-101G9;0.333278!10758-110E2;0.941641!10711-109H9;0.747837!10040-101F4;0.333485!10470-106I2;0.514916!10415-106C1;0.879035!10198-103E9;0.0725228!10614-108G2;0.434616!10612-108F9;0.530459!10549-107H9;0.825581!10615-108G3;0.556721!10487-107B1;0.190769!10433-106E1;0.599403!10688-109F4;0.488082!10444-106F3;0.812541!10444-106F3;0.532306!10485-107A8;0.560054!10413-106B8;0.669426!10175-103C4;0.852897!10161-103A8;0.64787!12131-128D7;0.895701!10624-108H3;0.681226!10712-109I1;0.609281!10205-103F7;0.763257!10206-103F8;0.761691!10207-103F9;0.918298!10050-101G5;0.694891!10051-101G6;0.64794!10016-101C7;0.944456!10046-101G1;0.528978!10778-110G4;0.895204!10633-108I3;0.987923!10818-111B8;0.742538!10819-111B9;0.607227!10820-111C1;0.611678!10484-107A7;0.569908!10808-111A7;0.582543!10169-103B7;0.620204!10153-102I9;0.418836!13425-144D5;0.609713!13433-144E4;0.498101!13437-144E8;0.439602!11904-125F5;0.405033!11905-125F6;0.865778!10039-101F3;0.770458!10791-110H8;0.543707!10017-101C8;0.651338!10045-101F9;0.069099!10509-107D5;0.20542!10839-111E2;0.565903!10692-109F8;0.523032!10079-102A7;0.88581!10078-102A6;0.939406!10721-110A1;0.625891!10569-108B2;0.223544!10570-108B3;0.525722!10571-108B4;0.830859!10647-109A8;0.515267!10752-110D5;0.851585!10782-110G8;0.65815!10726-110A6;0.622566!10018-101C9;0.312157!10086-102B5;0.284512!10182-103D2;0.257242!10165-103B3;0.675499!10499-107C4;0.738456!10408-106B3;0.59646!10019-101D1;0.289796!10068-101I5;0.171548!10075-102A3;0.445822!10077-102A5;0.231771!10727-110A7;0.630603!10775-110G1;0.831528!10412-106B7;0.855256!12231-129F8;0.482332!12232-129F9;0.616947!12233-129G1;0.347707!12234-129G2;0.603523!10414-106B9;0.564888!10170-103B8;0.333525!10183-103D3;0.382259!10150-102I6;0.440248!10174-103C3;0.592089!10155-103A2;0.669099!10038-101F2;0.846434!10838-111E1;0.795618!10759-110E3;0.423468!10514-107E1;0.829715!10465-106H6;0.630885!10691-109F7;0.304124!10843-111E6;0.0367705!10844-111E7;0.155396!11747-123G1;0.255432!11748-123G2;0.785493!11749-123G3;0.781144!11750-123G4;0.594109!11751-123G5;0.240452!11840-124H4;0.531241!11752-123G6;0.713353!11753-123G7;0.761901!11754-123G8;0.849133!11755-123G9;0.77004!11756-123H1;0.787924!11833-124G6;0.348514!11760-123H5;0.144087!11836-124G9;0.450975!11758-123H3;0.470174!11835-124G8;0.710572!11762-123H7;0.57602!11838-124H2;0.443495!11757-123H2;0.567162!11759-123H4;0.687186!11761-123H6;0.922697!11842-124H6;0.380994!11837-124H1;0.520098!10568-108B1;0.395858!13230-141I8;0.898321!13231-141I9;0.982859!10696-109G3;0.924816!10493-107B7;0.647629!10494-107B8;0.672557!10850-111F4;0.313842!10851-111F5;0.914998!10852-111F6;0.461404!10853-111F7;0.64359!10854-111F8;0.902401!10855-111F9;0.885593!10856-111G1;0.314054!10847-111F1;0.330857!10846-111E9;0.890134!10848-111F2;0.888276!10845-111E8;0.476517!10857-111G2;0.755787!10858-111G3;0.885207!10156-103A3;0.581377!11901-125F2;0.601277!11902-125F3;0.521092!11903-125F4;0.695333!10689-109F5;0.915537!10648-109A9;0.997409!10784-110H1;0.965889!10744-110C6;0.616473!10772-110F7;0.87313!10474-106I6;0.941499!10600-108E6;0.858752!10684-109E9;0.757034!12226-129F3;0.60019!12227-129F4;0.896505!10508-107D4;0.757473!10539-107G8;0.368237!10607-108F4;0.362594!10555-107I6;0.433828!10774-110F9;0.198484!10637-108I7;0.386662!10663-109C6;0.390993!10728-110A8;0.475257!10729-110A9;0.756152!10430-106D7;0.6939!10730-110B1;0.065412!10813-111B3;0.398676!10812-111B2;0.847617!10037-101F1;0.392285!10172-103C1;0.563021!10163-103B1;0.481417!10076-102A4;0.684788!10073-102A1;0.532925!10036-101E9;0.492722!10195-103E6;0.614067!10277-104E7;0.554175!10434-106E2;0.664521!10550-107I1;0.695145!10545-107H5;0.697597!10544-107H4;0.75983!10704-109H2;0.802203!10510-107D6;0.385566!10558-107I9;0.853506!10020-101D2;0.627706!10732-110B3;0.721791!10049-101G4;0.574288!10698-109G5;0.135538!10437-106E5;0.968054!10417-106C3;0.456441!10035-101E8;0.181241!10171-103B9;0.550957!10157-103A4;0.458007!10034-101E7;0.569985!10072-101I9;0.563421!10199-103F1;0.422483!10200-103F2;0.100137!10697-109G4;0.691164!10723-110A3;0.202653!10179-103C8;0.356527!10160-103A7;0.40283!10180-103C9;0.476854!10162-103A9;0.21444!10021-101D3;0.334211!10840-111E3;0.0151629!10706-109H4;0.842403!10033-101E6;0.197066!10032-101E5;0.613967!10490-107B4;0.568333!10439-106E7;0.675106!10022-101D4;0.538634!10176-103C5;0.49884!10469-106I1;0.430533!10067-101I4;0.885413!10411-106B6;0.781366!10471-106I3;0.397912!10030-101E3;0.778014!10475-106I7;0.971353!10787-110H4;0.235688!10477-106I9;0.218919!10695-109G2;0.329018!11771-123I7;0.688793!11772-123I8;0.858292!11773-123I9;0.862432!10093-102C3;0.698991!10442-106F1;0.198094!10442-106F1;0.145381!10201-103F3;0.115396!10639-108I9;0.626898!11843-124H7;0.731748!11841-124H5;0.617948!10693-109F9;0.801867!10436-106E4;0.72213!10483-107A6;0.749099!10282-104F3;0.830792!10023-101D5;0.485905!10066-101I3;0.903474!10065-101I2;0.507734!10800-110I8;0.717645!10610-108F7;0.354496!10841-111E4;0.291596!10541-107H1;0.56198!10842-111E5;0.232259!10562-108A4;0.421879!10024-101D6;0.654964!10064-101I1;0.183326!10609-108F6;0.292848!10048-101G3;0.252492!10781-110G7;0.775718!10181-103D1;0.357944!10159-103A6;0.663249!10056-101H2;0.773913!10737-110B8;0.728!10025-101D7;0.372675!10044-101F8;0.51729!10424-106D1;0.3051!10463-106H4;0.661588!10616-108G4;0.727717!10486-107A9;0.9144!10062-101H8;0.873017!10202-103F4;0.556819!10158-103A5;0.23945!10441-106E9;0.887095!10031-101E4;0.394236!10063-101H9;0.600491!10063-101H9;0.487058!11763-123H8;0.56783!11765-123I1;0.754311!11768-123I4;0.705981!10807-111A6;0.710652!10790-110H7;0.625942!10798-110I6;0.343223!10786-110H3;0.468501!10591-108D6;0.920532!10593-108D8;0.467367!10590-108D5;0.96285!10026-101D8;0.516503!10096-102C6;0.88239!10168-103B6;0.446389!10154-103A1;0.540757!10209-103G2;0.797213!10061-101H7;0.213326!10027-101D9;0.733542!10043-101F7;0.740019!10783-110G9;0.564646!10028-101E1;0.535918!10060-101H6;0.431311!10203-103F5;0.908189!10059-101H5;0.444729!10047-101G2;0.469581!10029-101E2;0.424421!10058-101H4;0.180813!10418-106C4;0.577086!10492-107B6;0.434531!10694-109G1;0.486758!10797-110I5;0.977323!10057-101H3;0.442194!10100-102D1;0.693667!10055-101H1;0.790232!10204-103F6;0.66755!10191-103E2;0.429896!10563-108A5;0.46277
|name=motif890
|name=motif890
|tomtom_result=GABPA#MA0062.1;0;0.00191386;0.911;1;6;CTCTTC;CTCTTCCGGT;-!RXR::RAR_DR5#MA0159.1;4;0.0121521;5.78441;1;6;CTCTTC;TGACCTCTCCGTGACCT;-!Trl#MA0205.1;3;0.0125408;5.96941;1;6;CTCTTC;TTGCTCTCTC;+
}}
}}

Latest revision as of 12:41, 7 September 2012

Full Name: motif890

Motif matrix
POACGT
01011019500
02000110195
03011019500
04000110195
05049365060830
06011019500

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
GABPA#MA0062.100.001913860.91116CTCTTCCTCTTCCGGT-
RXR::RAR_DR5#MA0159.140.01215215.7844116CTCTTCTGACCTCTCCGTGACCT-
Trl#MA0205.130.01254085.9694116CTCTTCTTGCTCTCTC+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif890&oldid=2133735"