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MacroAPE 1083:Motif970: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;47502;75493!02;0;0;122995;0!03;0;0;122995;0!04;0;0;122995;0!05;122995;0;0;0!06;0;0;122995;0 |macroape_1083_sample_pvalues=11376-118A8;...")
 
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07B7;0.478585!10494-107B8;0.430677!10850-111F4;0.726979!10851-111F5;0.804578!10852-111F6;0.600631!10853-111F7;0.584981!10854-111F8;0.679357!10855-111F9;0.968851!10856-111G1;0.335048!10847-111F1;0.991015!10846-111E9;0.867411!10848-111F2;0.673058!10845-111E8;0.790429!10857-111G2;0.94551!10858-111G3;0.0550869!10156-103A3;0.524122!11901-125F2;0.460602!11902-125F3;0.0864173!11903-125F4;0.0502958!10689-109F5;0.088369!10648-109A9;0.448223!10784-110H1;0.571694!10744-110C6;0.990899!10772-110F7;0.597633!10474-106I6;0.33533!10600-108E6;0.653244!10684-109E9;0.866664!12226-129F3;0.490369!12227-129F4;0.726181!10508-107D4;0.138475!10539-107G8;0.761025!10607-108F4;0.866865!10555-107I6;0.843932!10774-110F9;0.371344!10637-108I7;0.501348!10663-109C6;0.426205!10728-110A8;0.564848!10729-110A9;0.929628!10430-106D7;0.49497!10730-110B1;0.176458!10813-111B3;0.244468!10812-111B2;0.67244!10037-101F1;0.773674!10172-103C1;0.458908!10163-103B1;0.502238!10076-102A4;0.521895!10073-102A1;0.590119!10036-101E9;0.492489!10195-103E6;0.491104!10277-104E7;0.443215!10434-106E2;0.643915!10550-107I1;0.69042!10545-107H5;0.664747!10544-107H4;0.966679!10704-109H2;0.810317!10510-107D6;0.836121!10558-107I9;0.649128!10020-101D2;0.338198!10732-110B3;0.572476!10049-101G4;0.991338!10698-109G5;0.100867!10437-106E5;0.826423!10417-106C3;0.112235!10035-101E8;0.861504!10171-103B9;0.482339!10157-103A4;0.572768!10034-101E7;0.469822!10072-101I9;0.512567!10199-103F1;0.533496!10200-103F2;0.206801!10697-109G4;0.367287!10723-110A3;0.654893!10179-103C8;0.838153!10160-103A7;0.520425!10180-103C9;0.698054!10162-103A9;0.341427!10021-101D3;0.487028!10840-111E3;0.341825!10706-109H4;0.510067!10033-101E6;0.379718!10032-101E5;0.580428!10490-107B4;0.477479!10439-106E7;0.378772!10022-101D4;0.598299!10176-103C5;0.486564!10469-106I1;0.424602!10067-101I4;0.121001!10411-106B6;0.504632!10471-106I3;0.752636!10030-101E3;0.104654!10475-106I7;0.646064!10787-110H4;0.368651!10477-106I9;0.945634!10695-109G2;0.807251!11771-123I7;0.756718!11772-123I8;0.730812!11773-123I9;0.667474!10093-102C3;0.411647!10442-106F1;0.306945!10442-106F1;0.429342!10201-103F3;0.484332!10639-108I9;0.644308!11843-124H7;0.760683!11841-124H5;0.819039!10693-109F9;0.767742!10436-106E4;0.136431!10483-107A6;0.358235!10282-104F3;0.825021!10023-101D5;0.0455682!10066-101I3;0.212708!10065-101I2;0.64832!10800-110I8;0.253318!10610-108F7;0.0469734!10841-111E4;0.0391716!10541-107H1;0.32541!10842-111E5;0.025417!10562-108A4;0.207187!10024-101D6;0.153464!10064-101I1;0.439148!10609-108F6;0.411672!10048-101G3;0.146105!10781-110G7;0.636116!10181-103D1;0.0206747!10159-103A6;0.467!10056-101H2;0.603423!10737-110B8;0.398854!10025-101D7;0.581088!10044-101F8;0.609161!10424-106D1;0.479756!10463-106H4;0.605683!10616-108G4;0.382967!10486-107A9;0.666005!10062-101H8;0.497479!10202-103F4;0.645819!10158-103A5;0.359702!10441-106E9;0.630552!10031-101E4;0.865336!10063-101H9;0.447847!10063-101H9;0.37239!11763-123H8;0.198462!11765-123I1;0.328077!11768-123I4;0.429516!10807-111A6;0.416516!10790-110H7;0.534523!10798-110I6;0.584666!10786-110H3;0.62542!10591-108D6;0.284756!10593-108D8;0.248847!10590-108D5;0.476646!10026-101D8;0.19342!10096-102C6;0.156461!10168-103B6;0.45822!10154-103A1;0.579211!10209-103G2;0.516641!10061-101H7;0.220717!10027-101D9;0.351345!10043-101F7;0.80718!10783-110G9;0.306565!10028-101E1;0.816054!10060-101H6;0.279747!10203-103F5;0.467783!10059-101H5;0.194355!10047-101G2;0.192759!10029-101E2;0.201582!10058-101H4;0.331158!10418-106C4;0.2585!10492-107B6;0.545971!10694-109G1;0.973588!10797-110I5;0.744366!10057-101H3;0.675479!10100-102D1;0.483366!10055-101H1;0.628833!10204-103F6;0.440001!10191-103E2;0.591433!10563-108A5;0.305217
|name=motif970
|name=motif970
|tomtom_result=SP1#MA0079.2;1;0.00358759;1.70769;1;6;TGGGAG;GGGGGCGGGG;-!Egr1#MA0162.1;4;0.00689574;3.28237;1;6;TGGGAG;TGCGTGGGCGT;+!YNR063W#MA0432.1;0;0.00739167;3.51844;1;6;TGGGAG;TCGGAGAT;+!znf143#MA0088.1;11;0.00781795;3.72134;1;6;TGGGAG;GCAAGGCATGATGGGAAATC;-!MZF1_1-4#MA0056.1;1;0.0101052;4.81007;1;5;TGGGAG;TGGGGA;+!GCR2#MA0305.1;0;0.0109282;5.20182;1;6;TGGGAG;AGGAAGC;-!Klf4#MA0039.2;0;0.0118804;5.65506;1;6;TGGGAG;TGGGTGGGGC;+!GCR1#MA0304.1;0;0.0132722;6.31755;1;6;TGGGAG;TGGAAGCC;+!btd#MA0443.1;2;0.0132862;6.32423;1;6;TGGGAG;AGGGGGCGGA;+!hkb#MA0450.1;0;0.0140778;6.70101;1;6;TGGGAG;GGGGCGTGA;+
}}
}}

Latest revision as of 12:42, 7 September 2012

Full Name: motif970

Motif matrix
POACGT
01004750275493
02001229950
03001229950
04001229950
05122995000
06001229950

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.210.003587591.7076916TGGGAGGGGGGCGGGG-
Egr1#MA0162.140.006895743.2823716TGGGAGTGCGTGGGCGT+
YNR063W#MA0432.100.007391673.5184416TGGGAGTCGGAGAT+
znf143#MA0088.1110.007817953.7213416TGGGAGGCAAGGCATGATGGGAAATC-
MZF1_1-4#MA0056.110.01010524.8100715TGGGAGTGGGGA+
GCR2#MA0305.100.01092825.2018216TGGGAGAGGAAGC-
Klf4#MA0039.200.01188045.6550616TGGGAGTGGGTGGGGC+
GCR1#MA0304.100.01327226.3175516TGGGAGTGGAAGCC+
btd#MA0443.120.01328626.3242316TGGGAGAGGGGGCGGA+
hkb#MA0450.100.01407786.7010116TGGGAGGGGGCGTGA+
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