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MacroAPE 1083:Motif GANCAT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;1712;0!02;1712;0;0;0!03;428;428;428;428!04;0;1712;0;0!05;1712;0;0;0!06;0;0;0;1712 |macroape_1083_sample_pvalues=11376-118A8;0.264842!1...")
 
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83702!10789-110H6;0.687481!10828-111C9;0.388517!10788-110H5;0.275646!10792-110H9;0.614597!10765-110E9;0.562833!10829-111D1;0.395519!10830-111D2;0.548567!10831-111D3;0.82239!10832-111D4;0.230447!10833-111D5;0.199282!10764-110E8;0.273827!10770-110F5;0.0562573!10399-106A3;0.683891!10400-106A4;0.167718!10405-106A9;0.17912!10834-111D6;0.114269!10835-111D7;0.186974!10836-111D8;0.209894!10837-111D9;0.665693!10699-109G6;0.468011!10802-111A1;0.602926!10796-110I4;0.238779!10010-101C1;0.00429613!10810-111A9;0.444522!10421-106C7;0.75384!10708-109H6;0.519722!12235-129G3;0.384301!12236-129G4;0.600054!12237-129G5;0.349825!10167-103B5;0.478334!10151-102I7;0.149538!10428-106D5;0.148411!10795-110I3;0.42665!10805-111A4;0.996413!10052-101G7;0.85616!10189-103D9;0.652095!10589-108D4;0.985833!10425-106D2;0.92953!10427-106D4;0.292464!10702-109G9;0.699375!10432-106D9;0.154177!10496-107C1;0.0480117!10718-109I7;0.073895!10011-101C2;0.0681614!10053-101G8;0.636649!10686-109F2;0.366224!10084-102B3;0.422355!10012-101C3;0.171246!10085-102B4;0.13695!10482-107A5;0.238943!10419-106C5;0.152746!10080-102A8;0.0403121!10760-110E4;0.976438!10709-109H7;0.304346!10710-109H8;0.086077!10703-109H1;0.193056!10719-109I8;0.740268!10642-109A3;0.965378!10177-103C6;0.575481!10164-103B2;0.124546!10173-103C2;0.151072!10166-103B4;0.303232!10083-102B2;0.400103!10188-103D8;0.204825!10552-107I3;0.190434!10553-107I4;0.403697!10013-101C4;0.111538!10536-107G5;0.737799!10618-108G6;0.222223!10423-106C9;0.250405!10785-110H2;0.319201!12238-129G6;0.252759!12239-129G7;0.9769!12240-129G8;0.450968!10416-106C2;0.672839!10801-110I9;0.905561!10766-110F1;0.763826!10824-111C5;0.172055!10825-111C6;0.138039!10826-111C7;0.174463!10454-106G4;0.220041!10409-106B4;0.235568!10638-108I8;0.0967512!10636-108I6;0.205273!10513-107D9;0.0986825!10420-106C6;0.3875!10082-102B1;0.567885!10014-101C5;0.979648!10070-101I7;0.685189!10452-106G2;0.762858!10453-106G3;0.717305!10449-106F8;0.742312!10042-101F6;0.746061!10069-101I6;0.19218!10193-103E4;0.289943!10631-108I1;0.128701!10438-106E6;0.544039!10488-107B2;0.0372117!10196-103E7;0.41156!10071-101I8;0.895043!10071-101I8;0.694695!10041-101F5;0.164461!10451-106G1;0.784898!10450-106F9;0.441707!10604-108F1;0.445366!10605-108F2;0.502177!10606-108F3;0.752193!10603-108E9;0.509652!10497-107C2;0.612968!10448-106F7;0.0405617!10643-109A4;0.21856!10426-106D3;0.768404!10431-106D8;0.0281436!10197-103E8;0.121078!10443-106F2;0.587768!10815-111B5;0.558482!10816-111B6;0.188635!10817-111B7;0.0866787!10015-101C6;0.176392!10410-106B5;0.982621!10054-101G9;0.822991!10758-110E2;0.154088!10711-109H9;0.279489!10040-101F4;0.521312!10470-106I2;0.105787!10415-106C1;0.181302!10198-103E9;0.138972!10614-108G2;0.478455!10612-108F9;0.438121!10549-107H9;0.00408646!10615-108G3;0.754398!10487-107B1;0.842818!10433-106E1;0.0881495!10688-109F4;0.601504!10444-106F3;0.00741762!10444-106F3;0.936527!10485-107A8;0.87161!10413-106B8;0.911886!10175-103C4;0.872203!10161-103A8;0.0625693!12131-128D7;0.140917!10624-108H3;0.258093!10712-109I1;0.237545!10205-103F7;0.690033!10206-103F8;0.218645!10207-103F9;0.357872!10050-101G5;0.45083!10051-101G6;0.734269!10016-101C7;0.521155!10046-101G1;0.70085!10778-110G4;0.509882!10633-108I3;0.0339904!10818-111B8;0.10533!10819-111B9;0.586662!10820-111C1;0.544575!10484-107A7;0.494602!10808-111A7;0.262707!10169-103B7;0.893276!10153-102I9;0.0939546!13425-144D5;0.180633!13433-144E4;0.958557!13437-144E8;0.832401!11904-125F5;0.692754!11905-125F6;0.0409286!10039-101F3;0.036761!10791-110H8;0.132152!10017-101C8;0.119015!10045-101F9;0.868774!10509-107D5;0.713707!10839-111E2;0.263001!10692-109F8;0.579373!10079-102A7;0.101873!10078-102A6;0.351329!10721-110A1;0.608478!10569-108B2;0.620678!10570-108B3;0.6235!10571-108B4;0.22487!10647-109A8;0.633089!10752-110D5;0.726094!10782-110G8;0.366732!10726-110A6;0.140088!10018-101C9;0.566316!10086-102B5;0.359752!10182-103D2;0.609459!10165-103B3;0.158786!10499-107C4;0.176557!10408-106B3;0.445434!10019-101D1;0.00825599!10068-101I5;0.776766!10075-102A3;0.702935!10077-102A5;0.873968!10727-110A7;0.652975!10775-110G1;0.809426!10412-106B7;0.779479!12231-129F8;0.00153743!12232-129F9;0.338476!12233-129G1;0.573073!12234-129G2;0.835044!10414-106B9;0.627206!10170-103B8;0.167001!10183-103D3;0.0895339!10150-102I6;0.0821306!10174-103C3;0.137268!10155-103A2;0.175037!10038-101F2;0.223778!10838-111E1;0.210042!10759-110E3;0.733131!10514-107E1;0.793444!10465-106H6;0.864094!10691-109F7;0.421783!10843-111E6;0.585508!10844-111E7;0.672525!11747-123G1;0.70035!11748-123G2;0.443895!11749-123G3;0.52126!11750-123G4;0.116805!11751-123G5;0.241492!11840-124H4;0.124251!11752-123G6;0.181485!11753-123G7;0.0882424!11754-123G8;0.0625022!11755-123G9;0.617136!11756-123H1;0.194005!11833-124G6;0.0420499!11760-123H5;0.174582!11836-124G9;0.195466!11758-123H3;0.213978!11835-124G8;0.054947!11762-123H7;0.196488!11838-124H2;0.111886!11757-123H2;0.0757604!11759-123H4;0.0297395!11761-123H6;0.10522!11842-124H6;0.166965!11837-124H1;0.11565!10568-108B1;0.1973!13230-141I8;0.171582!13231-141I9;0.13679!10696-109G3;0.14904!10493-107B7;0.269908!10494-107B8;0.753634!10850-111F4;0.299488!10851-111F5;0.573365!10852-111F6;0.989395!10853-111F7;0.418675!10854-111F8;0.977574!10855-111F9;0.120144!10856-111G1;0.611917!10847-111F1;0.841425!10846-111E9;0.176651!10848-111F2;0.91208!10845-111E8;0.897211!10857-111G2;0.491846!10858-111G3;0.899817!10156-103A3;0.760569!11901-125F2;0.097294!11902-125F3;0.080047!11903-125F4;0.11647!10689-109F5;0.19058!10648-109A9;0.912926!10784-110H1;0.725817!10744-110C6;0.0441811!10772-110F7;0.899862!10474-106I6;0.363306!10600-108E6;0.153286!10684-109E9;0.410746!12226-129F3;0.924565!12227-129F4;0.317936!10508-107D4;0.449291!10539-107G8;0.405842!10607-108F4;0.770818!10555-107I6;0.944745!10774-110F9;0.426074!10637-108I7;0.930226!10663-109C6;0.789976!10728-110A8;0.745109!10729-110A9;0.624476!10430-106D7;0.127173!10730-110B1;0.372405!10813-111B3;0.726533!10812-111B2;0.311383!10037-101F1;0.0682254!10172-103C1;0.133205!10163-103B1;0.0452966!10076-102A4;0.109279!10073-102A1;0.0988251!10036-101E9;0.133027!10195-103E6;0.180388!10277-104E7;0.129429!10434-106E2;0.0592157!10550-107I1;0.158021!10545-107H5;0.154404!10544-107H4;0.159045!10704-109H2;0.335035!10510-107D6;0.266518!10558-107I9;0.216047!10020-101D2;0.793249!10732-110B3;0.658191!10049-101G4;0.743803!10698-109G5;0.822116!10437-106E5;0.491699!10417-106C3;0.84245!10035-101E8;0.0235113!10171-103B9;0.0919016!10157-103A4;0.0857024!10034-101E7;0.109521!10072-101I9;0.131731!10199-103F1;0.168979!10200-103F2;0.627339!10697-109G4;0.572157!10723-110A3;0.512621!10179-103C8;0.155512!10160-103A7;0.0357846!10180-103C9;0.0404261!10162-103A9;0.116446!10021-101D3;0.100095!10840-111E3;0.60113!10706-109H4;0.897742!10033-101E6;0.631844!10032-101E5;0.0678436!10490-107B4;0.159155!10439-106E7;0.385071!10022-101D4;0.159886!10176-103C5;0.676398!10469-106I1;0.118383!10067-101I4;0.0921227!10411-106B6;0.372972!10471-106I3;0.986828!10030-101E3;0.493186!10475-106I7;0.217945!10787-110H4;0.968483!10477-106I9;0.621411!10695-109G2;0.484355!11771-123I7;0.782969!11772-123I8;0.987538!11773-123I9;0.916716!10093-102C3;0.488397!10442-106F1;0.793228!10442-106F1;0.955239!10201-103F3;0.855259!10639-108I9;0.92147!11843-124H7;0.0838867!11841-124H5;0.682371!10693-109F9;0.491621!10436-106E4;0.0577817!10483-107A6;0.0388561!10282-104F3;0.0684664!10023-101D5;0.975833!10066-101I3;0.807462!10065-101I2;0.378579!10800-110I8;0.691595!10610-108F7;0.867819!10841-111E4;0.881007!10541-107H1;0.845788!10842-111E5;0.230773!10562-108A4;0.659298!10024-101D6;0.708781!10064-101I1;0.603091!10609-108F6;0.847028!10048-101G3;0.864075!10781-110G7;0.241521!10181-103D1;0.266088!10159-103A6;0.125108!10056-101H2;0.133221!10737-110B8;0.18846!10025-101D7;0.456263!10044-101F8;0.458491!10424-106D1;0.616779!10463-106H4;0.539068!10616-108G4;0.127436!10486-107A9;0.266326!10062-101H8;0.031397!10202-103F4;0.829681!10158-103A5;0.964498!10441-106E9;0.0735371!10031-101E4;0.836821!10063-101H9;0.177146!10063-101H9;0.183626!11763-123H8;0.503991!11765-123I1;0.303909!11768-123I4;0.143127!10807-111A6;0.100342!10790-110H7;0.615296!10798-110I6;0.894297!10786-110H3;0.992919!10591-108D6;0.470926!10593-108D8;0.0764412!10590-108D5;0.297529!10026-101D8;0.139856!10096-102C6;0.452908!10168-103B6;0.406562!10154-103A1;0.0725823!10209-103G2;0.171638!10061-101H7;0.917806!10027-101D9;0.878517!10043-101F7;0.306065!10783-110G9;0.475575!10028-101E1;0.500876!10060-101H6;0.571429!10203-103F5;0.821543!10059-101H5;0.980888!10047-101G2;0.750359!10029-101E2;0.768275!10058-101H4;0.909747!10418-106C4;0.680982!10492-107B6;0.260692!10694-109G1;0.756236!10797-110I5;0.515683!10057-101H3;0.0384432!10100-102D1;0.20514!10055-101H1;0.267433!10204-103F6;0.682574!10191-103E2;0.875896!10563-108A5;0.813822
|name=motif_GANCAT
|name=motif_GANCAT
|tomtom_result=TAL1::TCF3#MA0091.1;1;0.00384821;1.83175;1;6;GAACAT;CGACCATCTGTT;+!NR3C1#MA0113.1;2;0.0098312;4.67965;1;6;GAACAT;GGGAACATTATGTCCTAT;+!lin-14#MA0261.1;0;0.011824;5.6282;1;6;GAACAT;GAACAC;+
}}
}}

Latest revision as of 13:02, 7 September 2012

Full Name: motif_GANCAT

Motif matrix
POACGT
010017120
021712000
03428428428428
040171200
051712000
060001712

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
TAL1::TCF3#MA0091.110.003848211.8317516GAACATCGACCATCTGTT+
NR3C1#MA0113.120.00983124.6796516GAACATGGGAACATTATGTCCTAT+
lin-14#MA0261.100.0118245.628216GAACATGAACAC+
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