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MacroAPE 1083:WYCKMKCG,motif815: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;422.229;132.951;328.725;575.634!2;87.66;783.096;1.461;588.783!3;1.461;645.762;406.158;407.619!4;81.816;1.461;739.266;638.457!5;800.628;657.4...")
 
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.00333999!10717-109I6;0.0302637!10455-106G5;0.00355509!10534-107G3;0.0294468!10429-106D6;0.00205155!10464-106H5;0.051422!10827-111C8;0.00545966!10789-110H6;0.066957!10828-111C9;0.0579927!10788-110H5;0.0590841!10792-110H9;0.00308833!10765-110E9;0.0269934!10829-111D1;0.0109482!10830-111D2;0.0228212!10831-111D3;0.00193695!10832-111D4;0.0177637!10833-111D5;0.0127112!10764-110E8;0.0120434!10770-110F5;0.0109539!10399-106A3;0.0252394!10400-106A4;0.0176343!10405-106A9;0.0188269!10834-111D6;0.0210002!10835-111D7;0.0067075!10836-111D8;0.0214538!10837-111D9;0.00320431!10699-109G6;0.00679429!10802-111A1;0.00493345!10796-110I4;0.00516181!10010-101C1;0.0898949!10810-111A9;0.0213695!10421-106C7;0.00939006!10708-109H6;0.0573582!12235-129G3;0.0113678!12236-129G4;0.303634!12237-129G5;0.00621099!10167-103B5;0.403742!10151-102I7;0.660885!10428-106D5;0.414096!10795-110I3;0.658604!10805-111A4;0.128828!10052-101G7;0.0213986!10189-103D9;0.086621!10589-108D4;0.569779!10425-106D2;0.183776!10427-106D4;0.194441!10702-109G9;0.0274997!10432-106D9;0.012836!10496-107C1;0.0172158!10718-109I7;0.0234534!10011-101C2;0.0375674!10053-101G8;0.0763585!10686-109F2;0.71063!10084-102B3;0.57496!10012-101C3;0.455909!10085-102B4;0.259533!10482-107A5;0.36678!10419-106C5;0.0133146!10080-102A8;0.0114647!10760-110E4;0.144013!10709-109H7;0.034843!10710-109H8;0.0310405!10703-109H1;0.00081324!10719-109I8;0.050339!10642-109A3;0.0325653!10177-103C6;0.134065!10164-103B2;0.404507!10173-103C2;0.484934!10166-103B4;0.898468!10083-102B2;0.873844!10188-103D8;0.917796!10552-107I3;0.245685!10553-107I4;0.0323788!10013-101C4;0.520353!10536-107G5;0.160477!10618-108G6;0.989262!10423-106C9;0.000986687!10785-110H2;0.00651373!12238-129G6;0.00918923!12239-129G7;0.0955897!12240-129G8;0.342397!10416-106C2;0.121209!10801-110I9;0.0198124!10766-110F1;0.138758!10824-111C5;0.0343602!10825-111C6;0.01811!10826-111C7;0.0246436!10454-106G4;0.0466052!10409-106B4;0.0230594!10638-108I8;0.0480625!10636-108I6;0.0926028!10513-107D9;0.192733!10420-106C6;0.0319421!10082-102B1;0.0242271!10014-101C5;0.399603!10070-101I7;0.0819681!10452-106G2;0.213356!10453-106G3;0.348109!10449-106F8;0.161437!10042-101F6;0.148723!10069-101I6;0.0981757!10193-103E4;0.169634!10631-108I1;0.281098!10438-106E6;0.0385229!10488-107B2;0.000995092!10196-103E7;0.42578!10071-101I8;0.32234!10071-101I8;0.360838!10041-101F5;0.507754!10451-106G1;0.0981145!10450-106F9;0.0605914!10604-108F1;0.0166745!10605-108F2;0.0241949!10606-108F3;0.0849857!10603-108E9;0.0434036!10497-107C2;0.0356006!10448-106F7;0.321999!10643-109A4;0.32118!10426-106D3;0.494585!10431-106D8;0.0277958!10197-103E8;0.0077908!10443-106F2;0.0489084!10815-111B5;0.422594!10816-111B6;0.00474788!10817-111B7;0.00274615!10015-101C6;0.00673693!10410-106B5;0.175454!10054-101G9;0.532262!10758-110E2;0.12613!10711-109H9;0.0297687!10040-101F4;0.0551911!10470-106I2;0.576911!10415-106C1;0.00336941!10198-103E9;0.994639!10614-108G2;0.106021!10612-108F9;0.502211!10549-107H9;0.120728!10615-108G3;0.0167667!10487-107B1;0.20914!10433-106E1;0.432774!10688-109F4;0.100264!10444-106F3;0.0372262!10444-106F3;0.0391558!10485-107A8;0.0608065!10413-106B8;0.062913!10175-103C4;0.406222!10161-103A8;0.306127!12131-128D7;0.204304!10624-108H3;0.0223441!10712-109I1;0.348919!10205-103F7;0.0711119!10206-103F8;0.0554803!10207-103F9;0.0867803!10050-101G5;0.0333148!10051-101G6;0.27932!10016-101C7;0.0757418!10046-101G1;0.0425772!10778-110G4;0.38171!10633-108I3;0.0150464!10818-111B8;0.0238418!10819-111B9;0.0685456!10820-111C1;0.0699373!10484-107A7;0.0657553!10808-111A7;0.669741!10169-103B7;0.0146631!10153-102I9;0.35225!13425-144D5;0.331206!13433-144E4;0.00999179!13437-144E8;0.017748!11904-125F5;0.025198!11905-125F6;0.639959!10039-101F3;0.980601!10791-110H8;0.6342!10017-101C8;0.827504!10045-101F9;0.0761014!10509-107D5;0.859904!10839-111E2;0.326874!10692-109F8;0.779275!10079-102A7;0.00556238!10078-102A6;0.0690085!10721-110A1;0.107198!10569-108B2;0.0241451!10570-108B3;0.00378599!10571-108B4;0.000665508!10647-109A8;0.00690528!10752-110D5;0.0262845!10782-110G8;0.135674!10726-110A6;0.230551!10018-101C9;0.118732!10086-102B5;0.0353879!10182-103D2;0.342758!10165-103B3;0.413909!10499-107C4;0.148244!10408-106B3;0.398595!10019-101D1;0.030593!10068-101I5;0.167058!10075-102A3;0.424446!10077-102A5;0.138892!10727-110A7;0.0190253!10775-110G1;0.67554!10412-106B7;0.0695079!12231-129F8;0.217643!12232-129F9;0.000658577!12233-129G1;0.000281655!12234-129G2;0.00030008!10414-106B9;9.13439e-05!10170-103B8;0.118586!10183-103D3;0.657457!10150-102I6;0.541868!10174-103C3;0.477175!10155-103A2;0.0679792!10038-101F2;0.0898048!10838-111E1;0.128175!10759-110E3;0.0218367!10514-107E1;0.0371887!10465-106H6;0.337247!10691-109F7;0.100168!10843-111E6;0.491152!10844-111E7;0.0406711!11747-123G1;0.123687!11748-123G2;0.125945!11749-123G3;0.0774684!11750-123G4;0.141658!11751-123G5;0.0277472!11840-124H4;0.00936856!11752-123G6;0.00379902!11753-123G7;0.00210278!11754-123G8;0.025705!11755-123G9;0.144939!11756-123H1;0.432542!11833-124G6;0.169213!11760-123H5;0.0204259!11836-124G9;0.151137!11758-123H3;0.0958929!11835-124G8;0.0128121!11762-123H7;0.00984201!11838-124H2;0.0282359!11757-123H2;0.0195868!11759-123H4;0.192563!11761-123H6;0.0226156!11842-124H6;0.0534367!11837-124H1;0.0145947!10568-108B1;0.0759955!13230-141I8;0.953208!13231-141I9;0.133066!10696-109G3;0.176455!10493-107B7;0.938021!10494-107B8;0.0330186!10850-111F4;0.181504!10851-111F5;0.0134567!10852-111F6;0.00936775!10853-111F7;0.651449!10854-111F8;0.0246276!10855-111F9;0.0609679!10856-111G1;0.13976!10847-111F1;0.0325706!10846-111E9;0.018205!10848-111F2;0.0627122!10845-111E8;0.053801!10857-111G2;0.00497425!10858-111G3;0.00282412!10156-103A3;0.0994109!11901-125F2;0.525989!11902-125F3;0.486424!11903-125F4;0.640106!10689-109F5;0.683586!10648-109A9;0.931646!10784-110H1;0.123829!10744-110C6;0.13751!10772-110F7;0.301258!10474-106I6;0.00336598!10600-108E6;0.494169!10684-109E9;0.0486438!12226-129F3;0.329178!12227-129F4;0.252193!10508-107D4;0.649003!10539-107G8;0.193067!10607-108F4;0.119586!10555-107I6;0.0265933!10774-110F9;0.0791746!10637-108I7;0.00882625!10663-109C6;0.044979!10728-110A8;0.0723601!10729-110A9;0.00306699!10430-106D7;0.259971!10730-110B1;0.0369409!10813-111B3;0.148718!10812-111B2;0.664529!10037-101F1;0.0711837!10172-103C1;0.565016!10163-103B1;0.818038!10076-102A4;0.569681!10073-102A1;0.505257!10036-101E9;0.420463!10195-103E6;0.633912!10277-104E7;0.441386!10434-106E2;0.250436!10550-107I1;0.230784!10545-107H5;0.0304842!10544-107H4;0.583166!10704-109H2;0.0331765!10510-107D6;0.00528018!10558-107I9;0.0213959!10020-101D2;0.0137487!10732-110B3;0.463016!10049-101G4;0.111464!10698-109G5;0.157616!10437-106E5;0.00720456!10417-106C3;0.191548!10035-101E8;0.458398!10171-103B9;0.539023!10157-103A4;0.597683!10034-101E7;0.556436!10072-101I9;0.502816!10199-103F1;0.421185!10200-103F2;0.170214!10697-109G4;0.055715!10723-110A3;0.0546714!10179-103C8;0.53607!10160-103A7;0.532668!10180-103C9;0.45913!10162-103A9;0.331393!10021-101D3;0.648378!10840-111E3;0.16067!10706-109H4;0.0034003!10033-101E6;0.7781!10032-101E5;0.39165!10490-107B4;0.501533!10439-106E7;0.00546387!10022-101D4;0.0184451!10176-103C5;0.234703!10469-106I1;0.67892!10067-101I4;0.0943503!10411-106B6;0.689321!10471-106I3;0.18799!10030-101E3;0.975677!10475-106I7;0.172857!10787-110H4;0.00552201!10477-106I9;0.0490687!10695-109G2;0.0102148!11771-123I7;0.929156!11772-123I8;0.722643!11773-123I9;0.822952!10093-102C3;0.775464!10442-106F1;0.469344!10442-106F1;0.872464!10201-103F3;0.927863!10639-108I9;0.179878!11843-124H7;0.417335!11841-124H5;0.92147!10693-109F9;0.0918628!10436-106E4;0.102225!10483-107A6;0.027202!10282-104F3;0.0141396!10023-101D5;0.0771047!10066-101I3;0.0125341!10065-101I2;0.503106!10800-110I8;0.430262!10610-108F7;0.0224382!10841-111E4;0.343194!10541-107H1;0.00738816!10842-111E5;0.0656157!10562-108A4;0.0622432!10024-101D6;0.0621489!10064-101I1;0.138149!10609-108F6;0.543465!10048-101G3;0.354973!10781-110G7;0.178129!10181-103D1;0.119323!10159-103A6;0.112555!10056-101H2;0.171239!10737-110B8;0.374376!10025-101D7;0.487144!10044-101F8;0.222127!10424-106D1;0.451173!10463-106H4;0.164068!10616-108G4;0.317526!10486-107A9;0.821279!10062-101H8;0.714305!10202-103F4;0.591847!10158-103A5;0.191116!10441-106E9;0.0535769!10031-101E4;0.00159673!10063-101H9;0.469588!10063-101H9;0.415955!11763-123H8;0.240436!11765-123I1;0.178858!11768-123I4;0.032159!10807-111A6;0.109971!10790-110H7;0.0090182!10798-110I6;0.00794158!10786-110H3;0.047369!10591-108D6;0.0342329!10593-108D8;0.0372071!10590-108D5;0.161208!10026-101D8;0.000638769!10096-102C6;0.624493!10168-103B6;0.00417627!10154-103A1;0.419572!10209-103G2;0.206255!10061-101H7;0.164292!10027-101D9;0.472588!10043-101F7;0.0269405!10783-110G9;0.181201!10028-101E1;0.00348369!10060-101H6;0.0521114!10203-103F5;0.17225!10059-101H5;0.215695!10047-101G2;0.233084!10029-101E2;0.520681!10058-101H4;0.0899252!10418-106C4;0.222139!10492-107B6;0.0149059!10694-109G1;0.00300069!10797-110I5;0.0631023!10057-101H3;0.27699!10100-102D1;0.177348!10055-101H1;0.227626!10204-103F6;0.857148!10191-103E2;0.185845!10563-108A5;0.108974
|name=WYCKMKCG,motif815,CNhs13795,T:1461.0(34.67%),B:18900.9(26.89%),P:1e-28
|name=WYCKMKCG,motif815,CNhs13795,T:1461.0(34.67%),B:18900.9(26.89%),P:1e-28
|tomtom_result=RSC3#MA0374.1;-1;0.000809162;0.385161;0.770322;7;TCCGATCG;CCGCGCG;-!id1#MA0120.1;4;0.00260347;1.23925;1;8;TCCGATCG;TTTTCCTTTTCG;+!MBP1#MA0329.1;-2;0.0130064;6.19105;1;6;TCCGATCG;TACGCGT;-!DAL80#MA0289.1;-1;0.0141544;6.73749;1;7;TCCGATCG;CTTATCG;-!RSC30#MA0375.1;-2;0.0152927;7.27934;1;6;TCCGATCG;CGCGCGCG;-!Trl#MA0205.1;-1;0.0192738;9.17435;1;7;TCCGATCG;TTGCTCTCTC;+
}}
}}

Latest revision as of 13:14, 7 September 2012

Full Name: WYCKMKCG,motif815,CNhs13795,T:1461.0(34.67%),B:18900.9(26.89%),P:1e-28

Motif matrix
POACGT
1422.229132.951328.725575.634
287.66783.0961.461588.783
31.461645.762406.158407.619
481.8161.461739.266638.457
5800.628657.451.4611.461
6124.1851.461629.691705.663
71.4611311.9781.461146.1
81.4611.4611236.006222.072

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RSC3#MA0374.1-10.0008091620.3851610.7703227TCCGATCGCCGCGCG-
id1#MA0120.140.002603471.2392518TCCGATCGTTTTCCTTTTCG+
MBP1#MA0329.1-20.01300646.1910516TCCGATCGTACGCGT-
DAL80#MA0289.1-10.01415446.7374917TCCGATCGCTTATCG-
RSC30#MA0375.1-20.01529277.2793416TCCGATCGCGCGCGCG-
Trl#MA0205.1-10.01927389.1743517TCCGATCGTTGCTCTCTC+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:WYCKMKCG,motif815&oldid=2133933"