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MacroAPE 1083:CNhs13847 bu f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;65.99622353352134;57.71963286542305;141.27176941931302;28.021699280540982!2;74.1314300523466;78.62304185307063;122.33064703338673;17.9242061...")
 
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.334869!12183-129A5;0.250978!12184-129A6;0.334621!10809-111A8;0.551455!10597-108E3;3.97935e-05!10717-109I6;0.56575!10455-106G5;2.50836e-05!10534-107G3;0.00737194!10429-106D6;0.00890687!10464-106H5;0.344018!10827-111C8;0.0102026!10789-110H6;0.0122073!10828-111C9;0.00276183!10788-110H5;0.0381433!10792-110H9;0.00584569!10765-110E9;0.0912789!10829-111D1;0.000133568!10830-111D2;0.0330882!10831-111D3;0.204053!10832-111D4;0.0109166!10833-111D5;0.00552005!10764-110E8;0.00894775!10770-110F5;0.00191364!10399-106A3;0.0433195!10400-106A4;0.000124316!10405-106A9;7.16072e-05!10834-111D6;0.000127132!10835-111D7;0.021675!10836-111D8;0.00632957!10837-111D9;0.0164131!10699-109G6;0.00314295!10802-111A1;0.0389966!10796-110I4;0.157426!10010-101C1;1.39204e-05!10810-111A9;0.000249707!10421-106C7;0.00334259!10708-109H6;0.0156629!12235-129G3;6.86826e-05!12236-129G4;0.957383!12237-129G5;0.199292!10167-103B5;0.932006!10151-102I7;0.00771463!10428-106D5;0.00661014!10795-110I3;0.374656!10805-111A4;0.000394283!10052-101G7;0.0176513!10189-103D9;0.0011778!10589-108D4;0.0188821!10425-106D2;0.0911972!10427-106D4;0.579761!10702-109G9;0.0923155!10432-106D9;0.0255804!10496-107C1;6.91532e-06!10718-109I7;0.00255514!10011-101C2;0.000675076!10053-101G8;0.00117183!10686-109F2;0.501755!10084-102B3;0.537427!10012-101C3;0.0141037!10085-102B4;0.00408732!10482-107A5;0.0125455!10419-106C5;0.00185827!10080-102A8;0.000585799!10760-110E4;0.0271134!10709-109H7;8.79983e-06!10710-109H8;0.000123102!10703-109H1;6.80631e-05!10719-109I8;0.334983!10642-109A3;0.869989!10177-103C6;0.59615!10164-103B2;0.00481276!10173-103C2;0.00721775!10166-103B4;0.0299859!10083-102B2;0.0213015!10188-103D8;0.0195207!10552-107I3;0.00261878!10553-107I4;0.00479272!10013-101C4;0.0187884!10536-107G5;0.00215034!10618-108G6;0.343821!10423-106C9;0.0014307!10785-110H2;7.2325e-05!12238-129G6;3.02925e-05!12239-129G7;0.490608!12240-129G8;0.275114!10416-106C2;0.828174!10801-110I9;0.0739887!10766-110F1;8.50898e-05!10824-111C5;0.00526286!10825-111C6;4.36703e-06!10826-111C7;2.75661e-06!10454-106G4;8.78042e-06!10409-106B4;0.00158542!10638-108I8;0.0322491!10636-108I6;8.45236e-08!10513-107D9;0.000206315!10420-106C6;0.000142832!10082-102B1;0.107041!10014-101C5;0.195902!10070-101I7;0.0143841!10452-106G2;0.00670312!10453-106G3;0.353134!10449-106F8;0.0548408!10042-101F6;0.0590477!10069-101I6;0.00285792!10193-103E4;1.09582e-05!10631-108I1;0.00683433!10438-106E6;0.111669!10488-107B2;0.00109306!10196-103E7;0.00123228!10071-101I8;0.00101179!10071-101I8;0.00281176!10041-101F5;0.00663476!10451-106G1;0.000133722!10450-106F9;0.0215143!10604-108F1;0.0768323!10605-108F2;0.00313854!10606-108F3;2.89566e-05!10603-108E9;0.00278366!10497-107C2;0.00087868!10448-106F7;0.000475491!10643-109A4;0.00464835!10426-106D3;0.00268932!10431-106D8;0.000147796!10197-103E8;3.66689e-05!10443-106F2;0.00158254!10815-111B5;0.0108241!10816-111B6;4.29119e-05!10817-111B7;7.64167e-05!10015-101C6;2.76822e-05!10410-106B5;0.0627057!10054-101G9;0.124269!10758-110E2;4.92238e-05!10711-109H9;0.0386801!10040-101F4;0.000127561!10470-106I2;0.00690574!10415-106C1;1.45096e-05!10198-103E9;9.29122e-06!10614-108G2;0.0496682!10612-108F9;0.00686474!10549-107H9;0.0003983!10615-108G3;0.0117801!10487-107B1;0.905509!10433-106E1;0.00386131!10688-109F4;0.000711083!10444-106F3;0.000527772!10444-106F3;0.710851!10485-107A8;0.781881!10413-106B8;0.00835988!10175-103C4;0.075801!10161-103A8;0.00277489!12131-128D7;0.00368629!10624-108H3;0.950355!10712-109I1;0.0565366!10205-103F7;0.0103168!10206-103F8;1.38741e-05!10207-103F9;1.61392e-05!10050-101G5;0.000740994!10051-101G6;0.0339272!10016-101C7;0.000482471!10046-101G1;2.05504e-05!10778-110G4;7.63205e-05!10633-108I3;0.00173043!10818-111B8;0.0202075!10819-111B9;0.0079827!10820-111C1;0.00483557!10484-107A7;0.00926571!10808-111A7;0.0148222!10169-103B7;0.0293313!10153-102I9;0.00673496!13425-144D5;0.00463171!13433-144E4;0.0365505!13437-144E8;0.0765297!11904-125F5;0.0273283!11905-125F6;0.333491!10039-101F3;0.0403503!10791-110H8;0.00884073!10017-101C8;0.00305582!10045-101F9;0.0357982!10509-107D5;0.03257!10839-111E2;0.00169956!10692-109F8;0.00302678!10079-102A7;0.00507872!10078-102A6;7.81017e-05!10721-110A1;7.19099e-06!10569-108B2;0.0133136!10570-108B3;0.139176!10571-108B4;0.00962133!10647-109A8;0.0174101!10752-110D5;0.127496!10782-110G8;0.0161643!10726-110A6;0.261766!10018-101C9;0.0532524!10086-102B5;0.560261!10182-103D2;0.634488!10165-103B3;0.00263432!10499-107C4;0.00370018!10408-106B3;0.00973303!10019-101D1;2.57947e-05!10068-101I5;0.0249677!10075-102A3;0.000999466!10077-102A5;0.0104359!10727-110A7;0.00613387!10775-110G1;0.129542!10412-106B7;0.192592!12231-129F8;0.0107182!12232-129F9;0.00347839!12233-129G1;0.000468278!12234-129G2;0.00018979!10414-106B9;0.00056754!10170-103B8;0.0163104!10183-103D3;0.00810993!10150-102I6;0.00525812!10174-103C3;0.00570839!10155-103A2;0.000757455!10038-101F2;0.00116265!10838-111E1;0.00188038!10759-110E3;0.193439!10514-107E1;0.119882!10465-106H6;0.060869!10691-109F7;0.0336269!10843-111E6;0.0845016!10844-111E7;0.448275!11747-123G1;0.505783!11748-123G2;0.981285!11749-123G3;0.657855!11750-123G4;0.622047!11751-123G5;0.536522!11840-124H4;0.150483!11752-123G6;0.121228!11753-123G7;0.29799!11754-123G8;0.288213!11755-123G9;0.976402!11756-123H1;0.797076!11833-124G6;0.148691!11760-123H5;0.180917!11836-124G9;0.315859!11758-123H3;0.101691!11835-124G8;0.0424231!11762-123H7;0.0238228!11838-124H2;0.412032!11757-123H2;0.038664!11759-123H4;0.201123!11761-123H6;0.217734!11842-124H6;0.384828!11837-124H1;0.0456742!10568-108B1;0.0112485!13230-141I8;0.594394!13231-141I9;0.151204!10696-109G3;0.195814!10493-107B7;0.114962!10494-107B8;0.0277619!10850-111F4;0.00628593!10851-111F5;0.000937711!10852-111F6;0.0626724!10853-111F7;0.605501!10854-111F8;0.0016442!10855-111F9;0.00623119!10856-111G1;0.211708!10847-111F1;0.0353772!10846-111E9;0.22409!10848-111F2;0.00147254!10845-111E8;0.00278686!10857-111G2;0.000131418!10858-111G3;1.58456e-06!10156-103A3;0.0348122!11901-125F2;0.00450137!11902-125F3;0.0564171!11903-125F4;0.0436428!10689-109F5;0.0444031!10648-109A9;0.00033261!10784-110H1;0.337066!10744-110C6;0.000372411!10772-110F7;0.086481!10474-106I6;0.000148249!10600-108E6;0.292453!10684-109E9;0.344316!12226-129F3;0.344869!12227-129F4;0.01921!10508-107D4;0.0919633!10539-107G8;0.326985!10607-108F4;0.823513!10555-107I6;0.39076!10774-110F9;0.624261!10637-108I7;0.0188096!10663-109C6;0.637112!10728-110A8;0.441288!10729-110A9;0.134112!10430-106D7;0.0496864!10730-110B1;0.183766!10813-111B3;0.829584!10812-111B2;0.337043!10037-101F1;0.338874!10172-103C1;0.00647063!10163-103B1;0.0105267!10076-102A4;0.00562525!10073-102A1;0.00832293!10036-101E9;0.0157831!10195-103E6;0.0131731!10277-104E7;0.00405821!10434-106E2;0.00214044!10550-107I1;0.0144591!10545-107H5;1.38659e-05!10544-107H4;2.84384e-05!10704-109H2;1.84331e-05!10510-107D6;0.17733!10558-107I9;0.10003!10020-101D2;0.0349036!10732-110B3;0.00649364!10049-101G4;0.507972!10698-109G5;0.6292!10437-106E5;0.000100389!10417-106C3;0.0343379!10035-101E8;1.35224e-06!10171-103B9;0.00721575!10157-103A4;0.00688498!10034-101E7;0.00562552!10072-101I9;0.0085228!10199-103F1;0.0139391!10200-103F2;0.0330479!10697-109G4;0.000406163!10723-110A3;0.790436!10179-103C8;0.0275113!10160-103A7;0.00116944!10180-103C9;0.00483194!10162-103A9;0.000312033!10021-101D3;0.00128489!10840-111E3;0.00679558!10706-109H4;0.113682!10033-101E6;0.854086!10032-101E5;0.00315944!10490-107B4;0.0109444!10439-106E7;9.71771e-09!10022-101D4;9.4689e-06!10176-103C5;0.00638823!10469-106I1;0.00878142!10067-101I4;0.000453571!10411-106B6;0.00513221!10471-106I3;0.136541!10030-101E3;0.00150213!10475-106I7;0.000802091!10787-110H4;0.080294!10477-106I9;0.00248894!10695-109G2;0.906617!11771-123I7;0.111409!11772-123I8;0.132853!11773-123I9;0.200599!10093-102C3;0.914384!10442-106F1;0.13605!10442-106F1;0.00967892!10201-103F3;0.0376055!10639-108I9;0.00050118!11843-124H7;0.0446738!11841-124H5;0.0829585!10693-109F9;0.0435098!10436-106E4;0.0215247!10483-107A6;8.13764e-06!10282-104F3;0.000393463!10023-101D5;0.000992574!10066-101I3;1.23428e-05!10065-101I2;0.000198779!10800-110I8;0.00609474!10610-108F7;0.259353!10841-111E4;0.327684!10541-107H1;0.181426!10842-111E5;0.0928634!10562-108A4;0.693194!10024-101D6;0.57672!10064-101I1;0.0662005!10609-108F6;0.0391593!10048-101G3;0.937701!10781-110G7;0.00130256!10181-103D1;0.59472!10159-103A6;0.000616502!10056-101H2;0.000878889!10737-110B8;0.000777228!10025-101D7;0.105541!10044-101F8;0.00902825!10424-106D1;0.0277095!10463-106H4;0.0414141!10616-108G4;0.00070817!10486-107A9;0.000288067!10062-101H8;0.00345341!10202-103F4;0.00182425!10158-103A5;0.00396877!10441-106E9;0.00104042!10031-101E4;0.0171107!10063-101H9;0.0142206!10063-101H9;0.0118986!11763-123H8;0.000158783!11765-123I1;0.151421!11768-123I4;0.140518!10807-111A6;0.119624!10790-110H7;0.0879861!10798-110I6;0.101113!10786-110H3;6.34861e-07!10591-108D6;0.000196306!10593-108D8;0.00379568!10590-108D5;0.00124598!10026-101D8;0.00111625!10096-102C6;0.583058!10168-103B6;0.523619!10154-103A1;0.00170478!10209-103G2;0.00274504!10061-101H7;0.0033527!10027-101D9;5.10248e-05!10043-101F7;0.9382!10783-110G9;0.0378407!10028-101E1;0.417583!10060-101H6;0.0915403!10203-103F5;0.00306117!10059-101H5;0.0129317!10047-101G2;0.000822372!10029-101E2;0.0785747!10058-101H4;0.134381!10418-106C4;0.00013803!10492-107B6;0.00420281!10694-109G1;0.000635618!10797-110I5;0.60272!10057-101H3;0.0035344!10100-102D1;0.00402271!10055-101H1;0.00108998!10204-103F6;0.00264973!10191-103E2;0.00485418!10563-108A5;0.000663389
|name=CNhs13847_bu_f0
|name=CNhs13847_bu_f0
|tomtom_result=NHLH1#MA0048.1;-1;0.000338149;0.160959;0.148076;11;GGGGCAGCCGGG;GCGCAGCTGCGT;+!abi4#MA0123.1;1;0.000466744;0.22217;0.148076;9;GGGGCAGCCGGG;GGGGGCACCG;-!Myf#MA0055.1;-1;0.000817537;0.389148;0.194525;11;GGGGCAGCCGGG;CAGCAGCTGCTG;+!Mafb#MA0117.1;0;0.0013316;0.633841;0.253472;8;GGGGCAGCCGGG;GCGTCAGC;-!PHD1#MA0355.1;1;0.00592664;2.82108;0.940123;9;GGGGCAGCCGGG;TGCTGCAGGT;-!ACE2#MA0267.1;-2;0.00862178;4.10397;0.965457;7;GGGGCAGCCGGG;ACCAGCA;+!GCR2#MA0305.1;-1;0.0120656;5.74323;0.965457;7;GGGGCAGCCGGG;AGGAAGC;-!PPARG::RXRA#MA0065.2;2;0.012135;5.77625;0.965457;12;GGGGCAGCCGGG;GTAGGGCAAAGGTCA;+!REST#MA0138.2;10;0.0135242;6.4375;0.965457;11;GGGGCAGCCGGG;TTCAGCACCATGGACAGCGCC;+!opa#MA0456.1;-4;0.0146798;6.98757;0.965457;8;GGGGCAGCCGGG;CAGCGGGGGGTC;-!REST#MA0138.2;9;0.0149185;7.10122;0.965457;10;GGGGCAGCCGGG;TCAGCACCATGGACAGCGC;-!IXR1#MA0323.1;3;0.0163722;7.79316;0.965457;12;GGGGCAGCCGGG;AAGCCGGAAGCGGGG;+!YGR067C#MA0425.1;1;0.0166469;7.92391;0.965457;12;GGGGCAGCCGGG;TGAAAAAGTGGGGT;-!SOK2#MA0385.1;1;0.0204463;9.73244;0.965457;10;GGGGCAGCCGGG;ACCTGCAGGCA;+
}}
}}

Latest revision as of 13:18, 7 September 2012

Full Name: CNhs13847_bu_f0

Motif matrix
POACGT
165.9962235335213457.71963286542305141.2717694193130228.021699280540982
274.131430052346678.62304185307063122.3306470333867317.924206159994338
3100.058906454036132.00012993927471158.807510131291932.142778574195547
440.63882922092586436.36713524053745216.0033606373350.0
50.0293.00932509879810.00.0
6293.00932509879810.00.00.0
70.00.0293.00932509879810.0
80.0293.00932509879810.00.0
925.63421440571899399.7507679091576995.2513432235361772.3729995603855
1027.64563902700884876.65152555891521160.155260685237228.556899827637054
114.921100127414734118.6290278857157144.246140267633225.21305681803471
1260.15329250678077104.19579670238774124.866378984996533.7938569046332775

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NHLH1#MA0048.1-10.0003381490.1609590.14807611GGGGCAGCCGGGGCGCAGCTGCGT+
abi4#MA0123.110.0004667440.222170.1480769GGGGCAGCCGGGGGGGGCACCG-
Myf#MA0055.1-10.0008175370.3891480.19452511GGGGCAGCCGGGCAGCAGCTGCTG+
Mafb#MA0117.100.00133160.6338410.2534728GGGGCAGCCGGGGCGTCAGC-
PHD1#MA0355.110.005926642.821080.9401239GGGGCAGCCGGGTGCTGCAGGT-
ACE2#MA0267.1-20.008621784.103970.9654577GGGGCAGCCGGGACCAGCA+
GCR2#MA0305.1-10.01206565.743230.9654577GGGGCAGCCGGGAGGAAGC-
PPARG::RXRA#MA0065.220.0121355.776250.96545712GGGGCAGCCGGGGTAGGGCAAAGGTCA+
REST#MA0138.2100.01352426.43750.96545711GGGGCAGCCGGGTTCAGCACCATGGACAGCGCC+
opa#MA0456.1-40.01467986.987570.9654578GGGGCAGCCGGGCAGCGGGGGGTC-
REST#MA0138.290.01491857.101220.96545710GGGGCAGCCGGGTCAGCACCATGGACAGCGC-
IXR1#MA0323.130.01637227.793160.96545712GGGGCAGCCGGGAAGCCGGAAGCGGGG+
YGR067C#MA0425.110.01664697.923910.96545712GGGGCAGCCGGGTGAAAAAGTGGGGT-
SOK2#MA0385.110.02044639.732440.96545710GGGGCAGCCGGGACCTGCAGGCA+
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