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MacroAPE 1083:Motif558: Difference between revisions

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H6;0.450544!10828-111C9;0.481981!10788-110H5;0.869313!10792-110H9;0.352272!10765-110E9;0.528835!10829-111D1;0.591105!10830-111D2;0.292641!10831-111D3;0.815827!10832-111D4;0.369142!10833-111D5;0.301836!10764-110E8;0.40102!10770-110F5;0.650943!10399-106A3;0.579246!10400-106A4;0.328574!10405-106A9;0.380373!10834-111D6;0.305565!10835-111D7;0.328545!10836-111D8;0.647795!10837-111D9;0.932198!10699-109G6;0.313229!10802-111A1;0.837102!10796-110I4;0.928355!10010-101C1;0.335787!10810-111A9;0.572535!10421-106C7;0.549265!10708-109H6;0.704341!12235-129G3;0.523083!12236-129G4;0.862751!12237-129G5;0.122222!10167-103B5;0.659333!10151-102I7;0.0931296!10428-106D5;0.0909241!10795-110I3;0.784337!10805-111A4;0.391866!10052-101G7;0.578125!10189-103D9;0.627622!10589-108D4;0.792218!10425-106D2;0.399288!10427-106D4;0.957255!10702-109G9;0.502685!10432-106D9;0.306597!10496-107C1;0.126447!10718-109I7;0.279825!10011-101C2;0.480699!10053-101G8;0.701006!10686-109F2;0.710693!10084-102B3;0.187656!10012-101C3;0.09912!10085-102B4;0.0771389!10482-107A5;0.188457!10419-106C5;0.614889!10080-102A8;0.672242!10760-110E4;0.912672!10709-109H7;0.377985!10710-109H8;0.175515!10703-109H1;0.345745!10719-109I8;0.605703!10642-109A3;0.592726!10177-103C6;0.929255!10164-103B2;0.12099!10173-103C2;0.0806557!10166-103B4;0.161216!10083-102B2;0.13032!10188-103D8;0.149624!10552-107I3;0.109185!10553-107I4;0.0699919!10013-101C4;0.529391!10536-107G5;0.739911!10618-108G6;0.634379!10423-106C9;0.408535!10785-110H2;0.30785!12238-129G6;0.22957!12239-129G7;0.703206!12240-129G8;0.632623!10416-106C2;0.536822!10801-110I9;0.682586!10766-110F1;0.41554!10824-111C5;0.46569!10825-111C6;0.254628!10826-111C7;0.266915!10454-106G4;0.339166!10409-106B4;0.32301!10638-108I8;0.321429!10636-108I6;0.127562!10513-107D9;0.224383!10420-106C6;0.463204!10082-102B1;0.894829!10014-101C5;0.865182!10070-101I7;0.707885!10452-106G2;0.683257!10453-106G3;0.767667!10449-106F8;0.627133!10042-101F6;0.672247!10069-101I6;0.102431!10193-103E4;0.886968!10631-108I1;0.0829202!10438-106E6;0.436221!10488-107B2;0.345831!10196-103E7;0.258667!10071-101I8;0.819102!10071-101I8;0.906719!10041-101F5;0.227266!10451-106G1;0.265985!10450-106F9;0.323421!10604-108F1;0.332202!10605-108F2;0.695328!10606-108F3;0.0986625!10603-108E9;0.636467!10497-107C2;0.561238!10448-106F7;0.557976!10643-109A4;0.46774!10426-106D3;0.146396!10431-106D8;0.105103!10197-103E8;0.265821!10443-106F2;0.757213!10815-111B5;0.345606!10816-111B6;0.156533!10817-111B7;0.202289!10015-101C6;0.16644!10410-106B5;0.908558!10054-101G9;0.52529!10758-110E2;0.557607!10711-109H9;0.993378!10040-101F4;0.342451!10470-106I2;0.0538251!10415-106C1;0.152092!10198-103E9;0.391916!10614-108G2;0.7868!10612-108F9;0.0427765!10549-107H9;0.198779!10615-108G3;0.601527!10487-107B1;0.842247!10433-106E1;0.0491184!10688-109F4;0.272809!10444-106F3;0.177116!10444-106F3;0.459796!10485-107A8;0.52923!10413-106B8;0.84739!10175-103C4;0.6992!10161-103A8;0.135572!12131-128D7;0.0966703!10624-108H3;0.651895!10712-109I1;0.951111!10205-103F7;0.487376!10206-103F8;0.652325!10207-103F9;0.553684!10050-101G5;0.757365!10051-101G6;0.77263!10016-101C7;0.787606!10046-101G1;0.670999!10778-110G4;0.645241!10633-108I3;0.0986432!10818-111B8;0.887189!10819-111B9;0.415006!10820-111C1;0.366309!10484-107A7;0.354801!10808-111A7;0.484996!10169-103B7;0.50332!10153-102I9;0.087286!13425-144D5;0.109768!13433-144E4;0.199821!13437-144E8;0.212117!11904-125F5;0.151136!11905-125F6;0.94987!10039-101F3;0.659511!10791-110H8;0.0618147!10017-101C8;0.767629!10045-101F9;0.974955!10509-107D5;0.951449!10839-111E2;0.341576!10692-109F8;0.57824!10079-102A7;0.160408!10078-102A6;0.6343!10721-110A1;0.915699!10569-108B2;0.542647!10570-108B3;0.659494!10571-108B4;0.763492!10647-109A8;0.73261!10752-110D5;0.758863!10782-110G8;0.406034!10726-110A6;0.124974!10018-101C9;0.576741!10086-102B5;0.664218!10182-103D2;0.420111!10165-103B3;0.125318!10499-107C4;0.107019!10408-106B3;0.466587!10019-101D1;0.5066!10068-101I5;0.824506!10075-102A3;0.698302!10077-102A5;0.864343!10727-110A7;0.705407!10775-110G1;0.718822!10412-106B7;0.656288!12231-129F8;0.43204!12232-129F9;0.358974!12233-129G1;0.269214!12234-129G2;0.446474!10414-106B9;0.248761!10170-103B8;0.98206!10183-103D3;0.0669552!10150-102I6;0.0802863!10174-103C3;0.0819013!10155-103A2;0.2322!10038-101F2;0.164846!10838-111E1;0.136308!10759-110E3;0.5562!10514-107E1;0.825405!10465-106H6;0.666707!10691-109F7;0.660807!10843-111E6;0.182167!10844-111E7;0.924282!11747-123G1;0.760236!11748-123G2;0.73389!11749-123G3;0.883937!11750-123G4;0.404718!11751-123G5;0.815771!11840-124H4;0.807732!11752-123G6;0.807984!11753-123G7;0.555952!11754-123G8;0.980977!11755-123G9;0.884291!11756-123H1;0.706188!11833-124G6;0.564395!11760-123H5;0.479749!11836-124G9;0.637025!11758-123H3;0.672876!11835-124G8;0.630111!11762-123H7;0.643491!11838-124H2;0.921116!11757-123H2;0.704475!11759-123H4;0.934818!11761-123H6;0.491656!11842-124H6;0.896196!11837-124H1;0.830529!10568-108B1;0.612295!13230-141I8;0.231613!13231-141I9;0.958869!10696-109G3;0.905807!10493-107B7;0.161308!10494-107B8;0.256517!10850-111F4;0.314127!10851-111F5;0.0306271!10852-111F6;0.501462!10853-111F7;0.221386!10854-111F8;0.125011!10855-111F9;0.704651!10856-111G1;0.585925!10847-111F1;0.0710484!10846-111E9;0.649778!10848-111F2;0.609215!10845-111E8;0.198384!10857-111G2;0.556509!10858-111G3;0.20683!10156-103A3;0.139236!11901-125F2;0.0896162!11902-125F3;0.636996!11903-125F4;0.685098!10689-109F5;0.464837!10648-109A9;0.0369442!10784-110H1;0.0516485!10744-110C6;0.283714!10772-110F7;0.899589!10474-106I6;0.243653!10600-108E6;0.678809!10684-109E9;0.80468!12226-129F3;0.787309!12227-129F4;0.132581!10508-107D4;0.846964!10539-107G8;0.812552!10607-108F4;0.558818!10555-107I6;0.419578!10774-110F9;0.984763!10637-108I7;0.250152!10663-109C6;0.655292!10728-110A8;0.330235!10729-110A9;0.628346!10430-106D7;0.51489!10730-110B1;0.926296!10813-111B3;0.852192!10812-111B2;0.921289!10037-101F1;0.980333!10172-103C1;0.0623495!10163-103B1;0.0978916!10076-102A4;0.0987212!10073-102A1;0.0627897!10036-101E9;0.19755!10195-103E6;0.0727928!10277-104E7;0.0825517!10434-106E2;0.102016!10550-107I1;0.625009!10545-107H5;0.327305!10544-107H4;0.213016!10704-109H2;0.218046!10510-107D6;0.289189!10558-107I9;0.751744!10020-101D2;0.76869!10732-110B3;0.854685!10049-101G4;0.797937!10698-109G5;0.240506!10437-106E5;0.503603!10417-106C3;0.0474816!10035-101E8;0.05073!10171-103B9;0.0596662!10157-103A4;0.0910676!10034-101E7;0.0900266!10072-101I9;0.059323!10199-103F1;0.216139!10200-103F2;0.855688!10697-109G4;0.801612!10723-110A3;0.25279!10179-103C8;0.197519!10160-103A7;0.0735483!10180-103C9;0.0403498!10162-103A9;0.454702!10021-101D3;0.249965!10840-111E3;0.789346!10706-109H4;0.38166!10033-101E6;0.973386!10032-101E5;0.0815186!10490-107B4;0.064659!10439-106E7;0.143936!10022-101D4;0.0547895!10176-103C5;0.782539!10469-106I1;0.0699332!10067-101I4;0.516231!10411-106B6;0.515536!10471-106I3;0.594448!10030-101E3;0.0463072!10475-106I7;0.299085!10787-110H4;0.815155!10477-106I9;0.809608!10695-109G2;0.905155!11771-123I7;0.247391!11772-123I8;0.768569!11773-123I9;0.45813!10093-102C3;0.739105!10442-106F1;0.932151!10442-106F1;0.563257!10201-103F3;0.770049!10639-108I9;0.871333!11843-124H7;0.551975!11841-124H5;0.0127956!10693-109F9;0.0491737!10436-106E4;0.14052!10483-107A6;0.331154!10282-104F3;0.502791!10023-101D5;0.747628!10066-101I3;0.85323!10065-101I2;0.93079!10800-110I8;0.822304!10610-108F7;0.97269!10841-111E4;0.847634!10541-107H1;0.519156!10842-111E5;0.889082!10562-108A4;0.79057!10024-101D6;0.902216!10064-101I1;0.569533!10609-108F6;0.908087!10048-101G3;0.546396!10781-110G7;0.668793!10181-103D1;0.423216!10159-103A6;0.180384!10056-101H2;0.114851!10737-110B8;0.279461!10025-101D7;0.245!10044-101F8;0.842094!10424-106D1;0.965886!10463-106H4;0.475415!10616-108G4;0.41675!10486-107A9;0.880963!10062-101H8;0.160135!10202-103F4;0.75189!10158-103A5;0.982155!10441-106E9;0.156702!10031-101E4;0.815731!10063-101H9;0.0793329!10063-101H9;0.223074!11763-123H8;0.829559!11765-123I1;0.93539!11768-123I4;0.899817!10807-111A6;0.721518!10790-110H7;0.870454!10798-110I6;0.587301!10786-110H3;0.959909!10591-108D6;0.685998!10593-108D8;0.731649!10590-108D5;0.690709!10026-101D8;0.417464!10096-102C6;0.767459!10168-103B6;0.892637!10154-103A1;0.130899!10209-103G2;0.111755!10061-101H7;0.914596!10027-101D9;0.979694!10043-101F7;0.570575!10783-110G9;0.282401!10028-101E1;0.160062!10060-101H6;0.957297!10203-103F5;0.784684!10059-101H5;0.995414!10047-101G2;0.887951!10029-101E2;0.859427!10058-101H4;0.965362!10418-106C4;0.896711!10492-107B6;0.475072!10694-109G1;0.0540033!10797-110I5;0.289249!10057-101H3;0.446653!10100-102D1;0.911764!10055-101H1;0.568707!10204-103F6;0.951431!10191-103E2;0.593906!10563-108A5;0.714709
|name=motif558
|name=motif558
|tomtom_result=CRZ1#MA0285.1;2;0.00262877;1.2513;1;7;CAGCCTC;CTAAGCCAC;+!SP1#MA0079.2;3;0.00402654;1.91663;1;7;CAGCCTC;ACCCCGCCCC;-!STP1#MA0394.1;0;0.0133349;6.34739;1;7;CAGCCTC;GCGCCGCA;-!SP1#MA0079.2;2;0.0141709;6.74536;1;7;CAGCCTC;CCCCGCCCCC;+
}}
}}

Latest revision as of 13:21, 7 September 2012

Full Name: motif558

Motif matrix
POACGT
01012429600
027246424106779919927
03001242960
04524910261999056523
05489510970219677732
06000124296
07012429600

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CRZ1#MA0285.120.002628771.251317CAGCCTCCTAAGCCAC+
SP1#MA0079.230.004026541.9166317CAGCCTCACCCCGCCCC-
STP1#MA0394.100.01333496.3473917CAGCCTCGCGCCGCA-
SP1#MA0079.220.01417096.7453617CAGCCTCCCCCGCCCCC+
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