MacroAPE 1083:PAX5 f1: Difference between revisions
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(Created page with "{{Macroape_1083
|PWM=PO;A;C;G;T!1;1083.925443149737;999.6524899240925;1490.0698595701585;365.56880295394126!2;1337.6482534119161;265.3705966976998;1177.578251303819;1158.6194...") |
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0464-106H5;0.0143287!10827-111C8;0.0440553!10789-110H6;0.233776!10828-111C9;0.935557!10788-110H5;0.634892!10792-110H9;0.492345!10765-110E9;0.272621!10829-111D1;0.537811!10830-111D2;0.0371335!10831-111D3;0.345543!10832-111D4;0.2291!10833-111D5;0.200347!10764-110E8;0.103843!10770-110F5;0.0432839!10399-106A3;0.471533!10400-106A4;0.259513!10405-106A9;0.259499!10834-111D6;0.25676!10835-111D7;0.208157!10836-111D8;0.0370653!10837-111D9;0.0712267!10699-109G6;0.249618!10802-111A1;0.09166!10796-110I4;0.224432!10010-101C1;0.398331!10810-111A9;0.0101818!10421-106C7;0.113185!10708-109H6;0.612338!12235-129G3;0.0491!12236-129G4;0.0122151!12237-129G5;0.00461182!10167-103B5;0.0596751!10151-102I7;0.614539!10428-106D5;0.566778!10795-110I3;0.883373!10805-111A4;0.256164!10052-101G7;0.0114017!10189-103D9;0.403499!10589-108D4;0.0846114!10425-106D2;0.0836867!10427-106D4;0.14165!10702-109G9;0.072144!10432-106D9;0.0639546!10496-107C1;0.827167!10718-109I7;0.13203!10011-101C2;0.38415!10053-101G8;0.188764!10686-109F2;0.712881!10084-102B3;0.671997!10012-101C3;0.428429!10085-102B4;0.624467!10482-107A5;0.513568!10419-106C5;0.293156!10080-102A8;0.490514!10760-110E4;0.0117717!10709-109H7;0.787276!10710-109H8;0.334912!10703-109H1;0.458158!10719-109I8;0.35391!10642-109A3;0.0645183!10177-103C6;0.0957269!10164-103B2;0.729636!10173-103C2;0.531233!10166-103B4;0.389356!10083-102B2;0.222677!10188-103D8;0.276337!10552-107I3;0.532709!10553-107I4;0.15698!10013-101C4;0.274237!10536-107G5;0.13659!10618-108G6;0.224897!10423-106C9;0.384657!10785-110H2;0.588321!12238-129G6;0.14252!12239-129G7;0.0019263!12240-129G8;0.0421515!10416-106C2;0.00219826!10801-110I9;0.12119!10766-110F1;0.140829!10824-111C5;0.455779!10825-111C6;0.208538!10826-111C7;0.253861!10454-106G4;0.157838!10409-106B4;0.0601139!10638-108I8;0.520239!10636-108I6;0.0470738!10513-107D9;0.261728!10420-106C6;0.811002!10082-102B1;0.0249299!10014-101C5;0.0838464!10070-101I7;0.0217865!10452-106G2;0.0323671!10453-106G3;0.0349322!10449-106F8;0.0135586!10042-101F6;0.0367031!10069-101I6;0.904017!10193-103E4;0.124242!10631-108I1;0.520134!10438-106E6;0.136104!10488-107B2;0.668665!10196-103E7;0.979704!10071-101I8;0.0935509!10071-101I8;0.214885!10041-101F5;0.355267!10451-106G1;0.419343!10450-106F9;0.00225221!10604-108F1;0.0206409!10605-108F2;0.308907!10606-108F3;0.307462!10603-108E9;0.0976735!10497-107C2;0.167101!10448-106F7;0.408991!10643-109A4;0.864125!10426-106D3;0.519156!10431-106D8;0.379783!10197-103E8;0.41403!10443-106F2;0.158368!10815-111B5;0.475456!10816-111B6;0.168841!10817-111B7;0.18098!10015-101C6;0.211082!10410-106B5;0.0531501!10054-101G9;0.0229812!10758-110E2;0.514575!10711-109H9;0.0135175!10040-101F4;0.118915!10470-106I2;0.483434!10415-106C1;0.965868!10198-103E9;0.831026!10614-108G2;0.23589!10612-108F9;0.24871!10549-107H9;0.110411!10615-108G3;0.0558366!10487-107B1;0.0300474!10433-106E1;0.620876!10688-109F4;0.0207729!10444-106F3;0.472325!10444-106F3;0.758708!10485-107A8;0.908693!10413-106B8;0.91226!10175-103C4;0.0791316!10161-103A8;0.899147!12131-128D7;0.680128!10624-108H3;0.21337!10712-109I1;0.454688!10205-103F7;0.573219!10206-103F8;0.204571!10207-103F9;0.562029!10050-101G5;0.525425!10051-101G6;0.160585!10016-101C7;0.23407!10046-101G1;0.157835!10778-110G4;0.24223!10633-108I3;0.272078!10818-111B8;0.0173438!10819-111B9;0.0394562!10820-111C1;0.0400951!10484-107A7;0.0329621!10808-111A7;0.00451861!10169-103B7;0.0600978!10153-102I9;0.483709!13425-144D5;0.613693!13433-144E4;0.0670957!13437-144E8;0.086315!11904-125F5;0.0613307!11905-125F6;0.667185!10039-101F3;0.0927529!10791-110H8;0.523083!10017-101C8;0.781056!10045-101F9;0.0774156!10509-107D5;0.0665526!10839-111E2;0.377615!10692-109F8;0.429709!10079-102A7;0.81426!10078-102A6;0.0836164!10721-110A1;0.163584!10569-108B2;0.0683382!10570-108B3;0.976906!10571-108B4;0.149513!10647-109A8;0.398984!10752-110D5;0.568495!10782-110G8;0.380912!10726-110A6;0.962698!10018-101C9;0.61789!10086-102B5;0.947057!10182-103D2;0.572834!10165-103B3;0.856303!10499-107C4;0.828626!10408-106B3;0.396259!10019-101D1;0.760276!10068-101I5;0.0668522!10075-102A3;0.175251!10077-102A5;0.101719!10727-110A7;0.256148!10775-110G1;0.123263!10412-106B7;0.234773!12231-129F8;0.995482!12232-129F9;0.764384!12233-129G1;0.262768!12234-129G2;0.449535!10414-106B9;0.977286!10170-103B8;0.385353!10183-103D3;0.457976!10150-102I6;0.467666!10174-103C3;0.533365!10155-103A2;0.842852!10038-101F2;0.905151!10838-111E1;0.846071!10759-110E3;0.0113133!10514-107E1;0.136665!10465-106H6;0.0154518!10691-109F7;0.903328!10843-111E6;0.635562!10844-111E7;0.0137541!11747-123G1;0.136602!11748-123G2;0.858279!11749-123G3;0.845558!11750-123G4;0.213621!11751-123G5;0.517123!11840-124H4;0.494303!11752-123G6;0.0765239!11753-123G7;0.106758!11754-123G8;0.121733!11755-123G9;0.912407!11756-123H1;0.159961!11833-124G6;0.999222!11760-123H5;0.37196!11836-124G9;0.945822!11758-123H3;0.41953!11835-124G8;0.252309!11762-123H7;0.118568!11838-124H2;0.0609602!11757-123H2;0.0111709!11759-123H4;0.505365!11761-123H6;0.872058!11842-124H6;0.308219!11837-124H1;0.389096!10568-108B1;0.400863!13230-141I8;0.495393!13231-141I9;0.425266!10696-109G3;0.281937!10493-107B7;0.821452!10494-107B8;0.724579!10850-111F4;0.712304!10851-111F5;0.443361!10852-111F6;0.694834!10853-111F7;0.819072!10854-111F8;0.444!10855-111F9;0.628646!10856-111G1;0.291003!10847-111F1;0.988436!10846-111E9;0.888966!10848-111F2;0.759571!10845-111E8;0.620341!10857-111G2;0.0767737!10858-111G3;0.795652!10156-103A3;0.79373!11901-125F2;0.496969!11902-125F3;0.674004!11903-125F4;0.951251!10689-109F5;0.99577!10648-109A9;0.0654582!10784-110H1;0.980258!10744-110C6;0.64112!10772-110F7;0.269474!10474-106I6;0.618579!10600-108E6;0.286869!10684-109E9;0.611012!12226-129F3;0.995378!12227-129F4;0.524645!10508-107D4;0.0397332!10539-107G8;0.0270451!10607-108F4;0.0705066!10555-107I6;0.0251046!10774-110F9;0.0151301!10637-108I7;0.351392!10663-109C6;0.102677!10728-110A8;0.22089!10729-110A9;0.0190281!10430-106D7;0.703471!10730-110B1;0.020706!10813-111B3;0.221643!10812-111B2;0.623466!10037-101F1;0.267193!10172-103C1;0.550345!10163-103B1;0.466191!10076-102A4;0.585126!10073-102A1;0.407969!10036-101E9;0.312474!10195-103E6;0.525903!10277-104E7;0.456553!10434-106E2;0.216071!10550-107I1;0.517977!10545-107H5;0.819998!10544-107H4;0.730122!10704-109H2;0.967911!10510-107D6;0.580477!10558-107I9;0.140773!10020-101D2;0.0026176!10732-110B3;0.516579!10049-101G4;0.366726!10698-109G5;0.877004!10437-106E5;0.119019!10417-106C3;0.351769!10035-101E8;0.177204!10171-103B9;0.565849!10157-103A4;0.518137!10034-101E7;0.510102!10072-101I9;0.536617!10199-103F1;0.250704!10200-103F2;0.837261!10697-109G4;0.210433!10723-110A3;0.370632!10179-103C8;0.665158!10160-103A7;0.245104!10180-103C9;0.307255!10162-103A9;0.286941!10021-101D3;0.32137!10840-111E3;0.017919!10706-109H4;0.0387488!10033-101E6;0.216549!10032-101E5;0.738119!10490-107B4;0.513554!10439-106E7;0.636666!10022-101D4;0.903745!10176-103C5;0.107946!10469-106I1;0.4409!10067-101I4;0.148487!10411-106B6;0.397214!10471-106I3;0.369481!10030-101E3;0.71847!10475-106I7;0.600494!10787-110H4;0.0064813!10477-106I9;0.0252691!10695-109G2;0.031676!11771-123I7;0.661169!11772-123I8;0.687033!11773-123I9;0.757883!10093-102C3;0.890353!10442-106F1;0.246433!10442-106F1;0.303613!10201-103F3;0.401411!10639-108I9;0.0583874!11843-124H7;0.0913434!11841-124H5;0.169184!10693-109F9;0.820642!10436-106E4;0.670466!10483-107A6;0.514465!10282-104F3;0.753047!10023-101D5;0.612769!10066-101I3;0.366475!10065-101I2;0.421769!10800-110I8;0.110425!10610-108F7;0.362615!10841-111E4;0.730777!10541-107H1;0.0339301!10842-111E5;0.0580295!10562-108A4;0.0184068!10024-101D6;0.253815!10064-101I1;0.0299768!10609-108F6;0.360059!10048-101G3;0.21055!10781-110G7;0.643004!10181-103D1;0.331267!10159-103A6;0.984951!10056-101H2;0.96738!10737-110B8;0.78466!10025-101D7;0.913875!10044-101F8;0.207384!10424-106D1;0.148204!10463-106H4;0.0718284!10616-108G4;0.658932!10486-107A9;0.464458!10062-101H8;0.249307!10202-103F4;0.426715!10158-103A5;0.390668!10441-106E9;0.645669!10031-101E4;0.0465618!10063-101H9;0.574668!10063-101H9;0.28068!11763-123H8;0.240796!11765-123I1;0.283461!11768-123I4;0.155333!10807-111A6;0.0838589!10790-110H7;0.00720436!10798-110I6;0.0169463!10786-110H3;0.000491587!10591-108D6;0.203476!10593-108D8;0.157241!10590-108D5;0.360039!10026-101D8;0.13216!10096-102C6;0.54342!10168-103B6;0.00609222!10154-103A1;0.760899!10209-103G2;0.716117!10061-101H7;0.150679!10027-101D9;0.715433!10043-101F7;0.177204!10783-110G9;0.52229!10028-101E1;0.582429!10060-101H6;0.102559!10203-103F5;0.274328!10059-101H5;0.0933212!10047-101G2;0.151617!10029-101E2;0.0773132!10058-101H4;0.0322884!10418-106C4;0.272961!10492-107B6;0.826912!10694-109G1;0.704641!10797-110I5;0.789079!10057-101H3;0.625841!10100-102D1;0.174833!10055-101H1;0.381555!10204-103F6;0.594926!10191-103E2;0.0669751!10563-108A5;0.144028 | ||
|name=PAX5_f1 | |name=PAX5_f1 | ||
|tomtom_result=Pax5#MA0014.1;-1;2.11667e-16;1.00754e-13;1.99755e-13;18;GAGGGCAGTGAAGCGTGAC;GGAGCACTGAAGCGTAACCG;+!Pax6#MA0069.1;-5;8.98896e-07;0.000427875;0.000424153;14;GAGGGCAGTGAAGCGTGAC;AACTCATGCGTGAA;-!Pax2#MA0067.1;-12;0.00071407;0.339897;0.224627;7;GAGGGCAGTGAAGCGTGAC;GCGTGACT;-!DOT6#MA0351.1;1;0.00148776;0.708173;0.269347;19;GAGGGCAGTGAAGCGTGAC;AGGATGCGATGAGGTGCAGAA;-!TOD6#MA0350.1;1;0.00163953;0.780414;0.269347;19;GAGGGCAGTGAAGCGTGAC;AAAACGCGATGAGCTGTGCCT;-!NFYA#MA0060.1;-3;0.00171246;0.815132;0.269347;16;GAGGGCAGTGAAGCGTGAC;CTCAGCCAATCAGCGC;+!ESR1#MA0112.2;-1;0.00265131;1.26202;0.337624;18;GAGGGCAGTGAAGCGTGAC;GGCCCAGGTCACCCTGACCT;+!STP2#MA0395.1;-1;0.00334321;1.59137;0.337624;18;GAGGGCAGTGAAGCGTGAC;TGATCGGCGCCGCACGACGA;+!HAP4#MA0315.1;-3;0.00368844;1.7557;0.337624;15;GAGGGCAGTGAAGCGTGAC;ACCAATCAGAGGCGA;+!YGR067C#MA0425.1;-5;0.00398528;1.89699;0.337624;14;GAGGGCAGTGAAGCGTGAC;TGAAAAAGTGGGGT;-!ARO80#MA0273.1;1;0.00457125;2.17592;0.337624;19;GAGGGCAGTGAAGCGTGAC;ACATACTTGCCGAGAATTATC;-!Pax4#MA0068.1;0;0.00459789;2.1886;0.337624;19;GAGGGCAGTGAAGCGTGAC;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!abi4#MA0123.1;0;0.00465087;2.21381;0.337624;10;GAGGGCAGTGAAGCGTGAC;GGGGGCACCG;-!GAL4#MA0299.1;0;0.00598624;2.84945;0.403523;15;GAGGGCAGTGAAGCGTGAC;GAGTACTGTTCCCCG;-!hkb#MA0450.1;-9;0.00935604;4.45347;0.588631;9;GAGGGCAGTGAAGCGTGAC;GGGGCGTGA;+!usp#MA0016.1;-12;0.0102726;4.88974;0.6059;7;GAGGGCAGTGAAGCGTGAC;CCGTGACCCC;-!RDR1#MA0360.1;-11;0.0138334;6.58471;0.737088;8;GAGGGCAGTGAAGCGTGAC;TGCGGAAC;+!Zfx#MA0146.1;-3;0.0140588;6.69201;0.737088;14;GAGGGCAGTGAAGCGTGAC;GGGGCCGAGGCCTG;+!NRG1#MA0347.1;-3;0.015216;7.2428;0.755768;16;GAGGGCAGTGAAGCGTGAC;TGCGATGGACCCTGATCTAG;-!ESR1#MA0112.2;-4;0.0173598;8.26326;0.760718;15;GAGGGCAGTGAAGCGTGAC;CCAGGTCACCGTGACCCC;+!RXR::RAR_DR5#MA0159.1;-1;0.0173769;8.2714;0.760718;17;GAGGGCAGTGAAGCGTGAC;AGGTCATGGAGAGGTCA;+!Arnt::Ahr#MA0006.1;-11;0.01854;8.82503;0.760718;6;GAGGGCAGTGAAGCGTGAC;TGCGTG;+ | |||
}} | }} |
Latest revision as of 13:26, 7 September 2012
Full Name: PAX5_f1
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
Pax5#MA0014.1 | -1 | 2.11667e-16 | 1.00754e-13 | 1.99755e-13 | 18 | GAGGGCAGTGAAGCGTGAC | GGAGCACTGAAGCGTAACCG | + |
Pax6#MA0069.1 | -5 | 8.98896e-07 | 0.000427875 | 0.000424153 | 14 | GAGGGCAGTGAAGCGTGAC | AACTCATGCGTGAA | - |
Pax2#MA0067.1 | -12 | 0.00071407 | 0.339897 | 0.224627 | 7 | GAGGGCAGTGAAGCGTGAC | GCGTGACT | - |
DOT6#MA0351.1 | 1 | 0.00148776 | 0.708173 | 0.269347 | 19 | GAGGGCAGTGAAGCGTGAC | AGGATGCGATGAGGTGCAGAA | - |
TOD6#MA0350.1 | 1 | 0.00163953 | 0.780414 | 0.269347 | 19 | GAGGGCAGTGAAGCGTGAC | AAAACGCGATGAGCTGTGCCT | - |
NFYA#MA0060.1 | -3 | 0.00171246 | 0.815132 | 0.269347 | 16 | GAGGGCAGTGAAGCGTGAC | CTCAGCCAATCAGCGC | + |
ESR1#MA0112.2 | -1 | 0.00265131 | 1.26202 | 0.337624 | 18 | GAGGGCAGTGAAGCGTGAC | GGCCCAGGTCACCCTGACCT | + |
STP2#MA0395.1 | -1 | 0.00334321 | 1.59137 | 0.337624 | 18 | GAGGGCAGTGAAGCGTGAC | TGATCGGCGCCGCACGACGA | + |
HAP4#MA0315.1 | -3 | 0.00368844 | 1.7557 | 0.337624 | 15 | GAGGGCAGTGAAGCGTGAC | ACCAATCAGAGGCGA | + |
YGR067C#MA0425.1 | -5 | 0.00398528 | 1.89699 | 0.337624 | 14 | GAGGGCAGTGAAGCGTGAC | TGAAAAAGTGGGGT | - |
ARO80#MA0273.1 | 1 | 0.00457125 | 2.17592 | 0.337624 | 19 | GAGGGCAGTGAAGCGTGAC | ACATACTTGCCGAGAATTATC | - |
Pax4#MA0068.1 | 0 | 0.00459789 | 2.1886 | 0.337624 | 19 | GAGGGCAGTGAAGCGTGAC | GGGGGGGGAGTGGAGTATTGGAAATTTTTC | - |
abi4#MA0123.1 | 0 | 0.00465087 | 2.21381 | 0.337624 | 10 | GAGGGCAGTGAAGCGTGAC | GGGGGCACCG | - |
GAL4#MA0299.1 | 0 | 0.00598624 | 2.84945 | 0.403523 | 15 | GAGGGCAGTGAAGCGTGAC | GAGTACTGTTCCCCG | - |
hkb#MA0450.1 | -9 | 0.00935604 | 4.45347 | 0.588631 | 9 | GAGGGCAGTGAAGCGTGAC | GGGGCGTGA | + |
usp#MA0016.1 | -12 | 0.0102726 | 4.88974 | 0.6059 | 7 | GAGGGCAGTGAAGCGTGAC | CCGTGACCCC | - |
RDR1#MA0360.1 | -11 | 0.0138334 | 6.58471 | 0.737088 | 8 | GAGGGCAGTGAAGCGTGAC | TGCGGAAC | + |
Zfx#MA0146.1 | -3 | 0.0140588 | 6.69201 | 0.737088 | 14 | GAGGGCAGTGAAGCGTGAC | GGGGCCGAGGCCTG | + |
NRG1#MA0347.1 | -3 | 0.015216 | 7.2428 | 0.755768 | 16 | GAGGGCAGTGAAGCGTGAC | TGCGATGGACCCTGATCTAG | - |
ESR1#MA0112.2 | -4 | 0.0173598 | 8.26326 | 0.760718 | 15 | GAGGGCAGTGAAGCGTGAC | CCAGGTCACCGTGACCCC | + |
RXR::RAR_DR5#MA0159.1 | -1 | 0.0173769 | 8.2714 | 0.760718 | 17 | GAGGGCAGTGAAGCGTGAC | AGGTCATGGAGAGGTCA | + |
Arnt::Ahr#MA0006.1 | -11 | 0.01854 | 8.82503 | 0.760718 | 6 | GAGGGCAGTGAAGCGTGAC | TGCGTG | + |