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MacroAPE 1083:Motif183: Difference between revisions

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;0.173804!10827-111C8;0.105099!10789-110H6;0.219542!10828-111C9;0.319448!10788-110H5;0.20265!10792-110H9;0.129522!10765-110E9;0.257081!10829-111D1;0.59177!10830-111D2;0.155976!10831-111D3;0.213648!10832-111D4;0.323473!10833-111D5;0.224094!10764-110E8;0.182438!10770-110F5;0.28067!10399-106A3;0.332953!10400-106A4;0.182128!10405-106A9;0.138737!10834-111D6;0.125678!10835-111D7;0.0933476!10836-111D8;0.00695488!10837-111D9;0.23025!10699-109G6;0.0718103!10802-111A1;0.0719855!10796-110I4;0.1582!10010-101C1;0.388334!10810-111A9;0.648652!10421-106C7;0.203573!10708-109H6;0.140694!12235-129G3;0.399226!12236-129G4;0.96184!12237-129G5;0.817505!10167-103B5;0.782043!10151-102I7;0.856549!10428-106D5;0.603309!10795-110I3;0.306378!10805-111A4;0.157845!10052-101G7;0.506211!10189-103D9;0.578179!10589-108D4;0.927621!10425-106D2;0.259415!10427-106D4;0.590906!10702-109G9;0.253741!10432-106D9;0.808766!10496-107C1;0.107786!10718-109I7;0.603266!10011-101C2;0.527361!10053-101G8;0.55868!10686-109F2;0.238883!10084-102B3;0.330429!10012-101C3;0.67917!10085-102B4;0.754358!10482-107A5;0.730126!10419-106C5;0.596675!10080-102A8;0.405831!10760-110E4;0.312176!10709-109H7;0.649124!10710-109H8;0.566896!10703-109H1;0.902198!10719-109I8;0.467129!10642-109A3;0.18967!10177-103C6;0.456624!10164-103B2;0.750473!10173-103C2;0.575316!10166-103B4;0.836171!10083-102B2;0.785052!10188-103D8;0.593844!10552-107I3;0.575704!10553-107I4;0.17967!10013-101C4;0.536527!10536-107G5;0.492706!10618-108G6;0.364726!10423-106C9;0.161397!10785-110H2;0.0506948!12238-129G6;0.83142!12239-129G7;0.845108!12240-129G8;0.804206!10416-106C2;0.903343!10801-110I9;0.12715!10766-110F1;0.048038!10824-111C5;0.247729!10825-111C6;0.366343!10826-111C7;0.452421!10454-106G4;0.365248!10409-106B4;0.134484!10638-108I8;0.0920076!10636-108I6;0.236033!10513-107D9;0.0988626!10420-106C6;0.479328!10082-102B1;0.13524!10014-101C5;0.957099!10070-101I7;0.596908!10452-106G2;0.351731!10453-106G3;0.0540453!10449-106F8;0.02498!10042-101F6;0.0171596!10069-101I6;0.593936!10193-103E4;0.811807!10631-108I1;0.582845!10438-106E6;0.450882!10488-107B2;0.396617!10196-103E7;0.382778!10071-101I8;0.6853!10071-101I8;0.578093!10041-101F5;0.765137!10451-106G1;0.474267!10450-106F9;0.222837!10604-108F1;0.20854!10605-108F2;0.456636!10606-108F3;0.766793!10603-108E9;0.479316!10497-107C2;0.378734!10448-106F7;0.561213!10643-109A4;0.418377!10426-106D3;0.456933!10431-106D8;0.391692!10197-103E8;0.188266!10443-106F2;0.833416!10815-111B5;0.854024!10816-111B6;0.223127!10817-111B7;0.260767!10015-101C6;0.251576!10410-106B5;0.856218!10054-101G9;0.737105!10758-110E2;0.641101!10711-109H9;0.480354!10040-101F4;0.476495!10470-106I2;0.871829!10415-106C1;0.866476!10198-103E9;0.87921!10614-108G2;0.430507!10612-108F9;0.132486!10549-107H9;0.766783!10615-108G3;0.18731!10487-107B1;0.936862!10433-106E1;0.112884!10688-109F4;0.44027!10444-106F3;0.813716!10444-106F3;0.482113!10485-107A8;0.455108!10413-106B8;0.0526738!10175-103C4;0.0330527!10161-103A8;0.804273!12131-128D7;0.866724!10624-108H3;0.581226!10712-109I1;0.952358!10205-103F7;0.0594035!10206-103F8;0.422632!10207-103F9;0.383235!10050-101G5;0.853207!10051-101G6;0.625502!10016-101C7;0.234594!10046-101G1;0.269649!10778-110G4;0.468801!10633-108I3;0.229751!10818-111B8;0.310739!10819-111B9;0.688108!10820-111C1;0.715681!10484-107A7;0.62834!10808-111A7;0.597831!10169-103B7;0.0707345!10153-102I9;0.913965!13425-144D5;0.628021!13433-144E4;0.769476!13437-144E8;0.818592!11904-125F5;0.992273!11905-125F6;0.656052!10039-101F3;0.674314!10791-110H8;0.857541!10017-101C8;0.553174!10045-101F9;0.876167!10509-107D5;0.437737!10839-111E2;0.737575!10692-109F8;0.834676!10079-102A7;0.611233!10078-102A6;0.23173!10721-110A1;0.119065!10569-108B2;0.422083!10570-108B3;0.287868!10571-108B4;0.271938!10647-109A8;0.548542!10752-110D5;0.512477!10782-110G8;0.36302!10726-110A6;0.192709!10018-101C9;0.821931!10086-102B5;0.237581!10182-103D2;0.703338!10165-103B3;0.578611!10499-107C4;0.64556!10408-106B3;0.783522!10019-101D1;0.851519!10068-101I5;0.61512!10075-102A3;0.722599!10077-102A5;0.567827!10727-110A7;0.23144!10775-110G1;0.0380343!10412-106B7;0.162745!12231-129F8;0.320488!12232-129F9;0.39443!12233-129G1;0.281755!12234-129G2;0.305896!10414-106B9;0.688465!10170-103B8;0.634805!10183-103D3;0.942307!10150-102I6;0.853604!10174-103C3;0.719725!10155-103A2;0.813912!10038-101F2;0.551021!10838-111E1;0.590355!10759-110E3;0.147845!10514-107E1;0.0274394!10465-106H6;0.398641!10691-109F7;0.191477!10843-111E6;0.922725!10844-111E7;0.376499!11747-123G1;0.94596!11748-123G2;0.610454!11749-123G3;0.783347!11750-123G4;0.530751!11751-123G5;0.870907!11840-124H4;0.924286!11752-123G6;0.678262!11753-123G7;0.386423!11754-123G8;0.820659!11755-123G9;0.38277!11756-123H1;0.881693!11833-124G6;0.976393!11760-123H5;0.392689!11836-124G9;0.680694!11758-123H3;0.5883!11835-124G8;0.550522!11762-123H7;0.64224!11838-124H2;0.772338!11757-123H2;0.941023!11759-123H4;0.278091!11761-123H6;0.113699!11842-124H6;0.727015!11837-124H1;0.549157!10568-108B1;0.582064!13230-141I8;0.562532!13231-141I9;0.55289!10696-109G3;0.460686!10493-107B7;0.697433!10494-107B8;0.455903!10850-111F4;0.117642!10851-111F5;0.640904!10852-111F6;0.148242!10853-111F7;0.208347!10854-111F8;0.345185!10855-111F9;0.251236!10856-111G1;0.779549!10847-111F1;0.569703!10846-111E9;0.369921!10848-111F2;0.357989!10845-111E8;0.125822!10857-111G2;0.372099!10858-111G3;0.232831!10156-103A3;0.263215!11901-125F2;0.706718!11902-125F3;0.259913!11903-125F4;0.178285!10689-109F5;0.213359!10648-109A9;0.724149!10784-110H1;0.24513!10744-110C6;0.676561!10772-110F7;0.026314!10474-106I6;0.0385486!10600-108E6;0.207446!10684-109E9;0.595251!12226-129F3;0.142964!12227-129F4;0.926178!10508-107D4;0.155484!10539-107G8;0.590437!10607-108F4;0.440055!10555-107I6;0.345338!10774-110F9;0.7513!10637-108I7;0.0690685!10663-109C6;0.392548!10728-110A8;0.17755!10729-110A9;0.135354!10430-106D7;0.662444!10730-110B1;0.288338!10813-111B3;0.80987!10812-111B2;0.114219!10037-101F1;0.465483!10172-103C1;0.757676!10163-103B1;0.985511!10076-102A4;0.772648!10073-102A1;0.671639!10036-101E9;0.695686!10195-103E6;0.638836!10277-104E7;0.690873!10434-106E2;0.709692!10550-107I1;0.327573!10545-107H5;0.345069!10544-107H4;0.522326!10704-109H2;0.182347!10510-107D6;0.975132!10558-107I9;0.635601!10020-101D2;0.0192986!10732-110B3;0.389332!10049-101G4;0.121007!10698-109G5;0.780085!10437-106E5;0.0686749!10417-106C3;0.315241!10035-101E8;0.728265!10171-103B9;0.810028!10157-103A4;0.948825!10034-101E7;0.758196!10072-101I9;0.760297!10199-103F1;0.796929!10200-103F2;0.666733!10697-109G4;0.708961!10723-110A3;0.202323!10179-103C8;0.91888!10160-103A7;0.664999!10180-103C9;0.9857!10162-103A9;0.896893!10021-101D3;0.894878!10840-111E3;0.684608!10706-109H4;0.2532!10033-101E6;0.221569!10032-101E5;0.742642!10490-107B4;0.731547!10439-106E7;0.781423!10022-101D4;0.184374!10176-103C5;0.767829!10469-106I1;0.583512!10067-101I4;0.700901!10411-106B6;0.744438!10471-106I3;0.122404!10030-101E3;0.500096!10475-106I7;0.596811!10787-110H4;0.198615!10477-106I9;0.436296!10695-109G2;0.569776!11771-123I7;0.208772!11772-123I8;0.930133!11773-123I9;0.833852!10093-102C3;0.623169!10442-106F1;0.34783!10442-106F1;0.756358!10201-103F3;0.748294!10639-108I9;0.7828!11843-124H7;0.218784!11841-124H5;0.562711!10693-109F9;0.0373441!10436-106E4;0.995885!10483-107A6;0.670125!10282-104F3;0.911702!10023-101D5;0.719667!10066-101I3;0.66035!10065-101I2;0.785009!10800-110I8;0.774342!10610-108F7;0.337515!10841-111E4;0.947553!10541-107H1;0.820136!10842-111E5;0.748693!10562-108A4;0.132585!10024-101D6;0.78062!10064-101I1;0.980999!10609-108F6;0.674181!10048-101G3;0.166043!10781-110G7;0.762159!10181-103D1;0.699426!10159-103A6;0.71439!10056-101H2;0.807301!10737-110B8;0.515216!10025-101D7;0.96756!10044-101F8;0.341403!10424-106D1;0.474863!10463-106H4;0.282786!10616-108G4;0.858268!10486-107A9;0.171873!10062-101H8;0.0810289!10202-103F4;0.309859!10158-103A5;0.371386!10441-106E9;0.975321!10031-101E4;0.72594!10063-101H9;0.639327!10063-101H9;0.868103!11763-123H8;0.741552!11765-123I1;0.737019!11768-123I4;0.652696!10807-111A6;0.61676!10790-110H7;0.392598!10798-110I6;0.348624!10786-110H3;0.407419!10591-108D6;0.639644!10593-108D8;0.915162!10590-108D5;0.582043!10026-101D8;0.701331!10096-102C6;0.47519!10168-103B6;0.746151!10154-103A1;0.663363!10209-103G2;0.750627!10061-101H7;0.996225!10027-101D9;0.936217!10043-101F7;0.339243!10783-110G9;0.459743!10028-101E1;0.00460179!10060-101H6;0.397832!10203-103F5;0.588478!10059-101H5;0.819644!10047-101G2;0.647585!10029-101E2;0.84001!10058-101H4;0.879025!10418-106C4;0.656108!10492-107B6;0.197414!10694-109G1;0.0994525!10797-110I5;0.162944!10057-101H3;0.261459!10100-102D1;0.773296!10055-101H1;0.729921!10204-103F6;0.42489!10191-103E2;0.43544!10563-108A5;0.665771
|name=motif183
|name=motif183
|tomtom_result=Egr1#MA0162.1;0;0.000322985;0.153741;0.21496;8;CCTCCCAC;CCGCCCACGCA;-!SP1#MA0079.2;2;0.000452188;0.215242;0.21496;8;CCTCCCAC;CCCCGCCCCC;+!opa#MA0456.1;2;0.00235103;1.11909;0.593694;8;CCTCCCAC;GACCCCCCGCTG;+!SP1#MA0079.2;2;0.0032687;1.5559;0.593694;8;CCTCCCAC;ACCCCGCCCC;-!YPR022C#MA0436.1;-2;0.00369549;1.75905;0.593694;6;CCTCCCAC;CCCCACG;+!btd#MA0443.1;1;0.00374667;1.78342;0.593694;8;CCTCCCAC;TCCGCCCCCT;-!ADR1#MA0268.1;-1;0.00555163;2.64258;0.729172;7;CCTCCCAC;ACCCCAC;+!MIG1#MA0337.1;-1;0.00613553;2.92051;0.729172;7;CCTCCCAC;CCCCCGC;+!RREB1#MA0073.1;7;0.00960418;4.57159;0.998691;8;CCTCCCAC;CCCCAAACCACCCCCCCCCC;+!Macho-1#MA0118.1;2;0.0113235;5.38998;0.998691;7;CCTCCCAC;GAACCCCCA;-!ZNF354C#MA0130.1;-2;0.0118599;5.64533;0.998691;6;CCTCCCAC;ATCCAC;+!NDT80#MA0343.1;3;0.0141663;6.74314;0.998691;8;CCTCCCAC;TTTCCGGCCACAAAAACGCAA;+!Klf4#MA0039.2;3;0.0145938;6.94663;0.998691;7;CCTCCCAC;GCCCCACCCA;-!YML081W#MA0431.1;1;0.020699;9.85272;0.998691;8;CCTCCCAC;ACCCCGCAC;+
}}
}}

Latest revision as of 13:27, 7 September 2012

Full Name: motif183

Motif matrix
POACGT
0108495100
021572793697933217
0316852199091067637514
047639497201622711365
050840429090
0619398301200
0784951000
0851097984200

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Egr1#MA0162.100.0003229850.1537410.214968CCTCCCACCCGCCCACGCA-
SP1#MA0079.220.0004521880.2152420.214968CCTCCCACCCCCGCCCCC+
opa#MA0456.120.002351031.119090.5936948CCTCCCACGACCCCCCGCTG+
SP1#MA0079.220.00326871.55590.5936948CCTCCCACACCCCGCCCC-
YPR022C#MA0436.1-20.003695491.759050.5936946CCTCCCACCCCCACG+
btd#MA0443.110.003746671.783420.5936948CCTCCCACTCCGCCCCCT-
ADR1#MA0268.1-10.005551632.642580.7291727CCTCCCACACCCCAC+
MIG1#MA0337.1-10.006135532.920510.7291727CCTCCCACCCCCCGC+
RREB1#MA0073.170.009604184.571590.9986918CCTCCCACCCCCAAACCACCCCCCCCCC+
Macho-1#MA0118.120.01132355.389980.9986917CCTCCCACGAACCCCCA-
ZNF354C#MA0130.1-20.01185995.645330.9986916CCTCCCACATCCAC+
NDT80#MA0343.130.01416636.743140.9986918CCTCCCACTTTCCGGCCACAAAAACGCAA+
Klf4#MA0039.230.01459386.946630.9986917CCTCCCACGCCCCACCCA-
YML081W#MA0431.110.0206999.852720.9986918CCTCCCACACCCCGCAC+
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