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MacroAPE 1083:CNhs11777 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;335.1743634781142;196.23715480977904;131.36925880029406;512.6637940625931!2;41.845682537989376;457.7677381672346;327.00991135401915;348.8212...")
 
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429-106D6;0.130727!10464-106H5;0.182739!10827-111C8;0.0339546!10789-110H6;0.19808!10828-111C9;0.254688!10788-110H5;0.809819!10792-110H9;0.282765!10765-110E9;0.911488!10829-111D1;0.42749!10830-111D2;0.706027!10831-111D3;0.721592!10832-111D4;0.210639!10833-111D5;0.349787!10764-110E8;0.414585!10770-110F5;0.454951!10399-106A3;0.473551!10400-106A4;0.271071!10405-106A9;0.313919!10834-111D6;0.365065!10835-111D7;0.579039!10836-111D8;0.0369828!10837-111D9;0.0492127!10699-109G6;0.0282849!10802-111A1;0.187327!10796-110I4;0.260446!10010-101C1;0.505494!10810-111A9;0.17094!10421-106C7;0.164953!10708-109H6;0.809334!12235-129G3;0.0536367!12236-129G4;0.48296!12237-129G5;0.402339!10167-103B5;0.525371!10151-102I7;0.12266!10428-106D5;0.172556!10795-110I3;0.360787!10805-111A4;0.0749471!10052-101G7;0.31114!10189-103D9;0.139174!10589-108D4;0.3754!10425-106D2;0.668958!10427-106D4;0.695653!10702-109G9;0.1492!10432-106D9;0.0207008!10496-107C1;0.139075!10718-109I7;0.264878!10011-101C2;0.547545!10053-101G8;0.137835!10686-109F2;0.616492!10084-102B3;0.982961!10012-101C3;0.135019!10085-102B4;0.0980131!10482-107A5;0.165893!10419-106C5;0.292267!10080-102A8;0.42259!10760-110E4;0.266501!10709-109H7;0.298396!10710-109H8;0.13892!10703-109H1;0.119906!10719-109I8;0.851602!10642-109A3;0.8786!10177-103C6;0.682051!10164-103B2;0.289257!10173-103C2;0.211449!10166-103B4;0.402341!10083-102B2;0.266022!10188-103D8;0.214139!10552-107I3;0.112094!10553-107I4;0.172247!10013-101C4;0.696018!10536-107G5;0.0869407!10618-108G6;0.389049!10423-106C9;0.12974!10785-110H2;0.155185!12238-129G6;0.192273!12239-129G7;0.472639!12240-129G8;0.757253!10416-106C2;0.642699!10801-110I9;0.19981!10766-110F1;0.181374!10824-111C5;0.211932!10825-111C6;0.04772!10826-111C7;0.0633836!10454-106G4;0.0591845!10409-106B4;0.0860478!10638-108I8;0.252147!10636-108I6;0.0167083!10513-107D9;0.110678!10420-106C6;0.325512!10082-102B1;0.813547!10014-101C5;0.20373!10070-101I7;0.107826!10452-106G2;0.122536!10453-106G3;0.286503!10449-106F8;0.368184!10042-101F6;0.40824!10069-101I6;0.201094!10193-103E4;0.338267!10631-108I1;0.171891!10438-106E6;0.201361!10488-107B2;0.146644!10196-103E7;0.0945874!10071-101I8;0.0427896!10071-101I8;0.06182!10041-101F5;0.265977!10451-106G1;0.0794148!10450-106F9;0.0176504!10604-108F1;0.0846796!10605-108F2;0.137405!10606-108F3;0.117211!10603-108E9;0.119889!10497-107C2;0.0506881!10448-106F7;0.0930295!10643-109A4;0.128614!10426-106D3;0.259193!10431-106D8;0.203405!10197-103E8;0.148136!10443-106F2;0.0773988!10815-111B5;0.0252274!10816-111B6;0.311249!10817-111B7;0.298207!10015-101C6;0.246543!10410-106B5;0.1829!10054-101G9;0.251211!10758-110E2;0.120375!10711-109H9;0.274101!10040-101F4;0.16582!10470-106I2;0.128769!10415-106C1;0.0157662!10198-103E9;0.386531!10614-108G2;0.0755142!10612-108F9;0.0286745!10549-107H9;0.201906!10615-108G3;0.11942!10487-107B1;0.714047!10433-106E1;0.273459!10688-109F4;0.0467625!10444-106F3;0.20215!10444-106F3;0.690276!10485-107A8;0.685063!10413-106B8;0.620774!10175-103C4;0.801114!10161-103A8;0.168125!12131-128D7;0.216343!10624-108H3;0.474996!10712-109I1;0.575479!10205-103F7;0.152701!10206-103F8;0.129242!10207-103F9;0.308976!10050-101G5;0.452931!10051-101G6;0.770738!10016-101C7;0.33948!10046-101G1;0.424024!10778-110G4;0.602608!10633-108I3;0.0496766!10818-111B8;0.572442!10819-111B9;0.462625!10820-111C1;0.470761!10484-107A7;0.527531!10808-111A7;0.233331!10169-103B7;0.449342!10153-102I9;0.18478!13425-144D5;0.204715!13433-144E4;0.510466!13437-144E8;0.588235!11904-125F5;0.624867!11905-125F6;0.769696!10039-101F3;0.66981!10791-110H8;0.129195!10017-101C8;0.233291!10045-101F9;0.16329!10509-107D5;0.523108!10839-111E2;0.098061!10692-109F8;0.947025!10079-102A7;0.179924!10078-102A6;0.112729!10721-110A1;0.503764!10569-108B2;0.100779!10570-108B3;0.0949449!10571-108B4;0.0899219!10647-109A8;0.0767506!10752-110D5;0.124353!10782-110G8;0.0709316!10726-110A6;0.137117!10018-101C9;0.479515!10086-102B5;0.117104!10182-103D2;0.272241!10165-103B3;0.184118!10499-107C4;0.181818!10408-106B3;0.216673!10019-101D1;0.025478!10068-101I5;0.332951!10075-102A3;0.522965!10077-102A5;0.377724!10727-110A7;0.329435!10775-110G1;0.50771!10412-106B7;0.30418!12231-129F8;0.787492!12232-129F9;0.420506!12233-129G1;0.318262!12234-129G2;0.40197!10414-106B9;0.934472!10170-103B8;0.198583!10183-103D3;0.117041!10150-102I6;0.101376!10174-103C3;0.122918!10155-103A2;0.234816!10038-101F2;0.178661!10838-111E1;0.14333!10759-110E3;0.194665!10514-107E1;0.135968!10465-106H6;0.126682!10691-109F7;0.453142!10843-111E6;0.367769!10844-111E7;0.281061!11747-123G1;0.595239!11748-123G2;0.673238!11749-123G3;0.566119!11750-123G4;0.701309!11751-123G5;0.100329!11840-124H4;0.173804!11752-123G6;0.0468245!11753-123G7;0.0266141!11754-123G8;0.103468!11755-123G9;0.820553!11756-123H1;0.892596!11833-124G6;0.97155!11760-123H5;0.751113!11836-124G9;0.659777!11758-123H3;0.0563389!11835-124G8;0.102094!11762-123H7;0.0144602!11838-124H2;0.123036!11757-123H2;0.00417504!11759-123H4;0.870772!11761-123H6;0.82313!11842-124H6;0.489156!11837-124H1;0.00306884!10568-108B1;0.284815!13230-141I8;0.617561!13231-141I9;0.129334!10696-109G3;0.719752!10493-107B7;0.119765!10494-107B8;0.0407506!10850-111F4;0.0220977!10851-111F5;0.00574009!10852-111F6;0.379616!10853-111F7;0.260846!10854-111F8;0.100434!10855-111F9;0.124278!10856-111G1;0.377478!10847-111F1;0.730158!10846-111E9;0.4468!10848-111F2;0.112276!10845-111E8;0.128486!10857-111G2;0.083627!10858-111G3;0.186068!10156-103A3;0.166435!11901-125F2;0.119915!11902-125F3;0.547559!11903-125F4;0.307741!10689-109F5;0.232453!10648-109A9;0.178041!10784-110H1;0.53238!10744-110C6;0.0592935!10772-110F7;0.0242968!10474-106I6;0.234254!10600-108E6;0.635803!10684-109E9;0.229305!12226-129F3;0.642367!12227-129F4;0.597797!10508-107D4;0.0308008!10539-107G8;0.738044!10607-108F4;0.854013!10555-107I6;0.172234!10774-110F9;0.596616!10637-108I7;0.0503597!10663-109C6;0.515706!10728-110A8;0.4496!10729-110A9;0.215609!10430-106D7;0.112654!10730-110B1;0.128506!10813-111B3;0.8139!10812-111B2;0.0895929!10037-101F1;0.266228!10172-103C1;0.143551!10163-103B1;0.130122!10076-102A4;0.157154!10073-102A1;0.131976!10036-101E9;0.326864!10195-103E6;0.137804!10277-104E7;0.112534!10434-106E2;0.274585!10550-107I1;0.370103!10545-107H5;0.164376!10544-107H4;0.454971!10704-109H2;0.0390872!10510-107D6;0.0989021!10558-107I9;0.0978631!10020-101D2;0.325267!10732-110B3;0.290871!10049-101G4;0.903173!10698-109G5;0.0305853!10437-106E5;0.131725!10417-106C3;0.299431!10035-101E8;0.0822267!10171-103B9;0.125658!10157-103A4;0.128155!10034-101E7;0.126769!10072-101I9;0.129543!10199-103F1;0.303362!10200-103F2;0.0878646!10697-109G4;0.199994!10723-110A3;0.786134!10179-103C8;0.311071!10160-103A7;0.258116!10180-103C9;0.34641!10162-103A9;0.0731457!10021-101D3;0.239307!10840-111E3;0.363368!10706-109H4;0.24402!10033-101E6;0.710875!10032-101E5;0.108336!10490-107B4;0.121315!10439-106E7;0.0366366!10022-101D4;0.125521!10176-103C5;0.163701!10469-106I1;0.214773!10067-101I4;0.103992!10411-106B6;0.314101!10471-106I3;0.818144!10030-101E3;0.602107!10475-106I7;0.19194!10787-110H4;0.0587028!10477-106I9;0.0243362!10695-109G2;0.140368!11771-123I7;0.68816!11772-123I8;0.219632!11773-123I9;0.52603!10093-102C3;0.849701!10442-106F1;0.267092!10442-106F1;0.0377797!10201-103F3;0.0808832!10639-108I9;0.0403805!11843-124H7;0.162609!11841-124H5;0.714111!10693-109F9;0.785342!10436-106E4;0.818214!10483-107A6;0.368678!10282-104F3;0.483436!10023-101D5;0.728411!10066-101I3;0.459407!10065-101I2;0.376873!10800-110I8;0.387468!10610-108F7;0.220072!10841-111E4;0.428626!10541-107H1;0.322463!10842-111E5;0.255424!10562-108A4;0.675846!10024-101D6;0.949311!10064-101I1;0.0527541!10609-108F6;0.231622!10048-101G3;0.580499!10781-110G7;0.24734!10181-103D1;0.704809!10159-103A6;0.128633!10056-101H2;0.168344!10737-110B8;0.199588!10025-101D7;0.509134!10044-101F8;0.776857!10424-106D1;0.693518!10463-106H4;0.24146!10616-108G4;0.22617!10486-107A9;0.271447!10062-101H8;0.261061!10202-103F4;0.244729!10158-103A5;0.219224!10441-106E9;0.186378!10031-101E4;0.270624!10063-101H9;0.142622!10063-101H9;0.340255!11763-123H8;0.0237494!11765-123I1;0.0905046!11768-123I4;0.0686627!10807-111A6;0.0991016!10790-110H7;0.452418!10798-110I6;0.338672!10786-110H3;0.153431!10591-108D6;0.408742!10593-108D8;0.368653!10590-108D5;0.43906!10026-101D8;0.0532036!10096-102C6;0.586368!10168-103B6;0.675225!10154-103A1;0.143531!10209-103G2;0.175397!10061-101H7;0.274438!10027-101D9;0.397076!10043-101F7;0.319605!10783-110G9;0.844824!10028-101E1;0.107017!10060-101H6;0.800382!10203-103F5;0.346304!10059-101H5;0.200949!10047-101G2;0.292705!10029-101E2;0.399955!10058-101H4;0.193552!10418-106C4;0.185437!10492-107B6;0.016313!10694-109G1;0.0570964!10797-110I5;0.810609!10057-101H3;0.0276461!10100-102D1;0.27195!10055-101H1;0.1359!10204-103F6;0.228332!10191-103E2;0.422988!10563-108A5;0.159579
|name=CNhs11777_bu_f2
|name=CNhs11777_bu_f2
|tomtom_result=DOT6#MA0351.1;0;0.0056615;2.69487;1;10;TCTTGCTGTT;TTCTGCACCTCATCGCATCCT;+!AZF1#MA0277.1;-2;0.00594536;2.82999;1;8;TCTTGCTGTT;TTTCTTTTT;-!Trl#MA0205.1;-2;0.00795363;3.78593;1;8;TCTTGCTGTT;TTGCTCTCTC;+!CUP2#MA0287.1;3;0.00859192;4.08975;1;8;TCTTGCTGTT;CATTTCTGCTG;-!CRZ1#MA0285.1;-1;0.0100406;4.77931;1;9;TCTTGCTGTT;GTGGCTTAG;-!Myf#MA0055.1;1;0.0127335;6.06112;1;10;TCTTGCTGTT;CAGCAGCTGCTG;-!Spz1#MA0111.1;-4;0.0131776;6.27255;1;6;TCTTGCTGTT;GCTGTTACCCT;-!id1#MA0120.1;-2;0.0143389;6.8253;1;8;TCTTGCTGTT;TTTTCCTTTTCG;+!Dof2#MA0020.1;-3;0.0158456;7.54249;1;6;TCTTGCTGTT;TGCTTT;-!ACE2#MA0267.1;-3;0.0172168;8.1952;1;7;TCTTGCTGTT;TGCTGGT;-!Klf4#MA0039.1;0;0.0196543;9.35542;1;10;TCTTGCTGTT;CCTTCCTTTA;-!HMG-I/Y#MA0045.1;1;0.0198212;9.43488;1;10;TCTTGCTGTT;GTTTTTCCATTTGTTG;-
}}
}}

Latest revision as of 13:34, 7 September 2012

Full Name: CNhs11777_bu_f2

Motif matrix
POACGT
1335.1743634781142196.23715480977904131.36925880029406512.6637940625931
241.845682537989376457.7677381672346327.00991135401915348.8212390915372
35.6982124968151044387.26176058475867.627026782944883774.8575712862616
43.27117504221769861.7737463443815784449.81545986148035720.5841899027006
50.143496675484662083.015592798930143814.8838741374656357.4016075389007
60.01175.4445711507820.00.0
70.340835763416979960.340835763416979960.340835763416979961174.4220638605311
826.3541975835824386.540775862674503.2835485895401259.2660491149836
967.36090348002065422.567386498009943.26501846729357642.2512627054563
10109.75634081126523260.7472996521954194.0513717751155610.8895589122036

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
DOT6#MA0351.100.00566152.69487110TCTTGCTGTTTTCTGCACCTCATCGCATCCT+
AZF1#MA0277.1-20.005945362.8299918TCTTGCTGTTTTTCTTTTT-
Trl#MA0205.1-20.007953633.7859318TCTTGCTGTTTTGCTCTCTC+
CUP2#MA0287.130.008591924.0897518TCTTGCTGTTCATTTCTGCTG-
CRZ1#MA0285.1-10.01004064.7793119TCTTGCTGTTGTGGCTTAG-
Myf#MA0055.110.01273356.06112110TCTTGCTGTTCAGCAGCTGCTG-
Spz1#MA0111.1-40.01317766.2725516TCTTGCTGTTGCTGTTACCCT-
id1#MA0120.1-20.01433896.825318TCTTGCTGTTTTTTCCTTTTCG+
Dof2#MA0020.1-30.01584567.5424916TCTTGCTGTTTGCTTT-
ACE2#MA0267.1-30.01721688.195217TCTTGCTGTTTGCTGGT-
Klf4#MA0039.100.01965439.35542110TCTTGCTGTTCCTTCCTTTA-
HMG-I/Y#MA0045.110.01982129.43488110TCTTGCTGTTGTTTTTCCATTTGTTG-
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