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MacroAPE 1083:Motif123: Difference between revisions

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0.260329!10788-110H5;0.296194!10792-110H9;0.27576!10765-110E9;0.373306!10829-111D1;0.294465!10830-111D2;0.972601!10831-111D3;0.296959!10832-111D4;0.380476!10833-111D5;0.473233!10764-110E8;0.6628!10770-110F5;0.901548!10399-106A3;0.359959!10400-106A4;0.774074!10405-106A9;0.809455!10834-111D6;0.803642!10835-111D7;0.941581!10836-111D8;0.587044!10837-111D9;0.820738!10699-109G6;0.567099!10802-111A1;0.324939!10796-110I4;0.598452!10010-101C1;0.0167458!10810-111A9;0.104754!10421-106C7;0.150772!10708-109H6;0.706481!12235-129G3;0.0380526!12236-129G4;0.00304475!12237-129G5;0.413527!10167-103B5;0.0226642!10151-102I7;0.764253!10428-106D5;0.945626!10795-110I3;0.2516!10805-111A4;0.614532!10052-101G7;0.385062!10189-103D9;0.294331!10589-108D4;0.125692!10425-106D2;0.131188!10427-106D4;0.673647!10702-109G9;0.606651!10432-106D9;0.187852!10496-107C1;0.33929!10718-109I7;0.0363136!10011-101C2;0.146649!10053-101G8;0.402099!10686-109F2;0.445339!10084-102B3;0.780065!10012-101C3;0.579684!10085-102B4;0.718664!10482-107A5;0.941319!10419-106C5;0.107199!10080-102A8;0.147024!10760-110E4;0.249851!10709-109H7;0.0376614!10710-109H8;0.123778!10703-109H1;0.0135364!10719-109I8;0.267722!10642-109A3;0.17258!10177-103C6;0.485224!10164-103B2;0.901421!10173-103C2;0.982547!10166-103B4;0.999999!10083-102B2;0.984263!10188-103D8;0.854706!10552-107I3;0.740998!10553-107I4;0.113866!10013-101C4;0.113432!10536-107G5;0.361714!10618-108G6;0.813077!10423-106C9;0.0231256!10785-110H2;0.0610236!12238-129G6;0.478854!12239-129G7;0.629499!12240-129G8;0.647935!10416-106C2;0.997417!10801-110I9;0.570047!10766-110F1;0.409898!10824-111C5;0.865541!10825-111C6;0.189851!10826-111C7;0.188015!10454-106G4;0.253932!10409-106B4;0.268757!10638-108I8;0.861393!10636-108I6;0.426529!10513-107D9;0.333387!10420-106C6;0.308107!10082-102B1;0.175362!10014-101C5;0.291529!10070-101I7;0.420533!10452-106G2;0.735391!10453-106G3;0.84852!10449-106F8;0.912798!10042-101F6;0.960256!10069-101I6;0.790088!10193-103E4;0.33075!10631-108I1;0.600379!10438-106E6;0.888247!10488-107B2;0.220721!10196-103E7;0.13524!10071-101I8;0.526818!10071-101I8;0.520138!10041-101F5;0.84453!10451-106G1;0.35174!10450-106F9;0.337098!10604-108F1;0.186081!10605-108F2;0.00499195!10606-108F3;0.0169511!10603-108E9;0.0333054!10497-107C2;0.199143!10448-106F7;0.328538!10643-109A4;0.0799149!10426-106D3;0.0786814!10431-106D8;0.406538!10197-103E8;0.606886!10443-106F2;0.744571!10815-111B5;0.0537626!10816-111B6;0.152879!10817-111B7;0.122451!10015-101C6;0.142659!10410-106B5;0.650318!10054-101G9;0.0519738!10758-110E2;0.893136!10711-109H9;0.302513!10040-101F4;0.502935!10470-106I2;0.743032!10415-106C1;0.246843!10198-103E9;0.533388!10614-108G2;0.38018!10612-108F9;0.0275619!10549-107H9;0.00917949!10615-108G3;0.191791!10487-107B1;0.366101!10433-106E1;0.324147!10688-109F4;0.50478!10444-106F3;0.0935955!10444-106F3;0.470401!10485-107A8;0.363466!10413-106B8;0.067578!10175-103C4;0.792424!10161-103A8;0.729293!12131-128D7;0.996534!10624-108H3;0.139275!10712-109I1;0.185907!10205-103F7;0.967841!10206-103F8;0.167414!10207-103F9;0.168805!10050-101G5;0.252784!10051-101G6;0.721743!10016-101C7;0.198106!10046-101G1;0.126161!10778-110G4;0.0350359!10633-108I3;0.605863!10818-111B8;0.46842!10819-111B9;0.152467!10820-111C1;0.155775!10484-107A7;0.146514!10808-111A7;0.322279!10169-103B7;0.957028!10153-102I9;0.871569!13425-144D5;0.944759!13433-144E4;0.271249!13437-144E8;0.205186!11904-125F5;0.21686!11905-125F6;0.0688971!10039-101F3;0.0835714!10791-110H8;0.748701!10017-101C8;0.256364!10045-101F9;0.489834!10509-107D5;0.433648!10839-111E2;0.179893!10692-109F8;0.0166542!10079-102A7;0.146676!10078-102A6;0.14268!10721-110A1;0.229136!10569-108B2;0.0289294!10570-108B3;0.286706!10571-108B4;0.0237569!10647-109A8;0.184417!10752-110D5;0.727615!10782-110G8;0.896532!10726-110A6;0.590494!10018-101C9;0.157568!10086-102B5;0.624257!10182-103D2;0.178909!10165-103B3;0.787529!10499-107C4;0.775196!10408-106B3;0.171335!10019-101D1;0.108208!10068-101I5;0.248069!10075-102A3;0.114934!10077-102A5;0.198772!10727-110A7;0.231749!10775-110G1;0.692424!10412-106B7;0.854984!12231-129F8;0.414237!12232-129F9;0.213243!12233-129G1;0.0713635!12234-129G2;0.102027!10414-106B9;0.103284!10170-103B8;0.0758953!10183-103D3;0.81724!10150-102I6;0.761384!10174-103C3;0.894074!10155-103A2;0.689004!10038-101F2;0.855786!10838-111E1;0.832662!10759-110E3;0.74253!10514-107E1;0.94637!10465-106H6;0.597513!10691-109F7;0.51593!10843-111E6;0.200943!10844-111E7;0.345234!11747-123G1;0.452682!11748-123G2;0.633743!11749-123G3;0.839931!11750-123G4;0.632292!11751-123G5;0.35663!11840-124H4;0.531695!11752-123G6;0.671993!11753-123G7;0.831862!11754-123G8;0.397191!11755-123G9;0.599736!11756-123H1;0.339003!11833-124G6;0.645666!11760-123H5;0.35337!11836-124G9;0.521319!11758-123H3;0.337209!11835-124G8;0.290255!11762-123H7;0.778425!11838-124H2;0.969226!11757-123H2;0.346768!11759-123H4;0.688508!11761-123H6;0.838306!11842-124H6;0.79079!11837-124H1;0.76725!10568-108B1;0.703223!13230-141I8;0.0891355!13231-141I9;0.723494!10696-109G3;0.916431!10493-107B7;0.948127!10494-107B8;0.0443436!10850-111F4;0.240061!10851-111F5;0.54283!10852-111F6;0.116634!10853-111F7;0.170018!10854-111F8;0.135546!10855-111F9;0.00564137!10856-111G1;0.683637!10847-111F1;0.578477!10846-111E9;0.208102!10848-111F2;0.0414869!10845-111E8;0.10404!10857-111G2;0.0491018!10858-111G3;0.08242!10156-103A3;0.017061!11901-125F2;0.900796!11902-125F3;0.593023!11903-125F4;0.575208!10689-109F5;0.377056!10648-109A9;0.341454!10784-110H1;0.240421!10744-110C6;0.196156!10772-110F7;0.37479!10474-106I6;0.376956!10600-108E6;0.515819!10684-109E9;0.10479!12226-129F3;0.94984!12227-129F4;0.333599!10508-107D4;0.618197!10539-107G8;0.496002!10607-108F4;0.462413!10555-107I6;0.205912!10774-110F9;0.366728!10637-108I7;0.260146!10663-109C6;0.646358!10728-110A8;0.123909!10729-110A9;0.197119!10430-106D7;0.841668!10730-110B1;0.709288!10813-111B3;0.439127!10812-111B2;0.937949!10037-101F1;0.671245!10172-103C1;0.745166!10163-103B1;0.663928!10076-102A4;0.975024!10073-102A1;0.566327!10036-101E9;0.842359!10195-103E6;0.694681!10277-104E7;0.728669!10434-106E2;0.546901!10550-107I1;0.136809!10545-107H5;0.0596659!10544-107H4;0.238895!10704-109H2;0.0701796!10510-107D6;0.928557!10558-107I9;0.473236!10020-101D2;0.403612!10732-110B3;0.387125!10049-101G4;0.788397!10698-109G5;0.00227047!10437-106E5;0.0519019!10417-106C3;0.127864!10035-101E8;0.521243!10171-103B9;0.666433!10157-103A4;0.706739!10034-101E7;0.917692!10072-101I9;0.722539!10199-103F1;0.899106!10200-103F2;0.574504!10697-109G4;0.43129!10723-110A3;0.0744532!10179-103C8;0.339385!10160-103A7;0.977337!10180-103C9;0.984897!10162-103A9;0.428395!10021-101D3;0.928556!10840-111E3;0.66206!10706-109H4;0.66977!10033-101E6;0.672544!10032-101E5;0.640868!10490-107B4;0.659882!10439-106E7;0.214304!10022-101D4;0.414806!10176-103C5;0.476782!10469-106I1;0.848513!10067-101I4;0.252213!10411-106B6;0.514421!10471-106I3;0.048176!10030-101E3;0.117527!10475-106I7;0.620431!10787-110H4;0.477428!10477-106I9;0.191371!10695-109G2;0.34661!11771-123I7;0.557083!11772-123I8;0.826172!11773-123I9;0.355308!10093-102C3;0.710646!10442-106F1;0.407128!10442-106F1;0.448099!10201-103F3;0.400477!10639-108I9;0.505129!11843-124H7;0.51456!11841-124H5;0.900182!10693-109F9;0.803444!10436-106E4;0.693177!10483-107A6;0.103238!10282-104F3;0.0256297!10023-101D5;0.792017!10066-101I3;0.246156!10065-101I2;0.816697!10800-110I8;0.431424!10610-108F7;0.512783!10841-111E4;0.239072!10541-107H1;0.135391!10842-111E5;0.273889!10562-108A4;0.527469!10024-101D6;0.263162!10064-101I1;0.391452!10609-108F6;0.406737!10048-101G3;0.0675447!10781-110G7;0.368655!10181-103D1;0.682145!10159-103A6;0.858871!10056-101H2;0.875335!10737-110B8;0.747546!10025-101D7;0.476133!10044-101F8;0.268219!10424-106D1;0.211758!10463-106H4;0.598799!10616-108G4;0.336538!10486-107A9;0.888667!10062-101H8;0.111583!10202-103F4;0.766161!10158-103A5;0.33647!10441-106E9;0.76278!10031-101E4;0.144227!10063-101H9;0.683023!10063-101H9;0.764048!11763-123H8;0.639492!11765-123I1;0.753248!11768-123I4;0.633583!10807-111A6;0.548338!10790-110H7;0.238464!10798-110I6;0.432366!10786-110H3;0.666533!10591-108D6;0.442896!10593-108D8;0.176499!10590-108D5;0.472253!10026-101D8;0.39903!10096-102C6;0.642528!10168-103B6;0.237883!10154-103A1;0.549569!10209-103G2;0.845227!10061-101H7;0.361629!10027-101D9;0.469433!10043-101F7;0.256545!10783-110G9;0.196482!10028-101E1;0.425222!10060-101H6;0.224327!10203-103F5;0.114725!10059-101H5;0.687293!10047-101G2;0.936206!10029-101E2;0.317089!10058-101H4;0.397018!10418-106C4;0.776333!10492-107B6;0.757503!10694-109G1;0.41233!10797-110I5;0.510147!10057-101H3;0.0257065!10100-102D1;0.513142!10055-101H1;0.336409!10204-103F6;0.922715!10191-103E2;0.460719!10563-108A5;0.0892774
|name=motif123
|name=motif123
|tomtom_result=SFL1#MA0377.1;4;0.00978898;4.65955;1;8;GGAGAGAA;TAGAGAATAGAAGAAATAAAA;+!HMG-1#MA0044.1;0;0.0116471;5.54402;1;8;GGAGAGAA;GAATACAAC;-!SFP1#MA0378.1;2;0.0132829;6.32264;1;8;GGAGAGAA;CCGTAGAAAATTTTTTTCAAT;-!YRR1#MA0439.1;2;0.0134407;6.39776;1;8;GGAGAGAA;GCGGAGATAAG;-!FOXC1#MA0032.1;0;0.0142981;6.80588;1;8;GGAGAGAA;GGTAAGTA;+
}}
}}

Latest revision as of 13:43, 7 September 2012

Full Name: motif123

Motif matrix
POACGT
01001092960
0234211186964151014879
034848804149019318
043123620875488958290
05109296000
06001092960
07109296000
08109296000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SFL1#MA0377.140.009788984.6595518GGAGAGAATAGAGAATAGAAGAAATAAAA+
HMG-1#MA0044.100.01164715.5440218GGAGAGAAGAATACAAC-
SFP1#MA0378.120.01328296.3226418GGAGAGAACCGTAGAAAATTTTTTTCAAT-
YRR1#MA0439.120.01344076.3977618GGAGAGAAGCGGAGATAAG-
FOXC1#MA0032.100.01429816.8058818GGAGAGAAGGTAAGTA+
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