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MacroAPE 1083:Motif301: Difference between revisions

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846!10828-111C9;0.909803!10788-110H5;0.850765!10792-110H9;0.674625!10765-110E9;0.620988!10829-111D1;0.80179!10830-111D2;0.612442!10831-111D3;0.545286!10832-111D4;0.643498!10833-111D5;0.872512!10764-110E8;0.612657!10770-110F5;0.576136!10399-106A3;0.789633!10400-106A4;0.572902!10405-106A9;0.623491!10834-111D6;0.623849!10835-111D7;0.921277!10836-111D8;0.520559!10837-111D9;0.967194!10699-109G6;0.991161!10802-111A1;0.552179!10796-110I4;0.876233!10010-101C1;0.50577!10810-111A9;0.493525!10421-106C7;0.73327!10708-109H6;0.666013!12235-129G3;0.889861!12236-129G4;0.344799!12237-129G5;0.327404!10167-103B5;0.0806978!10151-102I7;0.68056!10428-106D5;0.980837!10795-110I3;0.288571!10805-111A4;0.324363!10052-101G7;0.712728!10189-103D9;0.551193!10589-108D4;0.715715!10425-106D2;0.750593!10427-106D4;0.544017!10702-109G9;0.751121!10432-106D9;0.49141!10496-107C1;0.830376!10718-109I7;0.369337!10011-101C2;0.796274!10053-101G8;0.539386!10686-109F2;0.884983!10084-102B3;0.0580614!10012-101C3;0.665644!10085-102B4;0.71693!10482-107A5;0.233694!10419-106C5;0.789623!10080-102A8;0.970868!10760-110E4;0.962761!10709-109H7;0.863598!10710-109H8;0.949004!10703-109H1;0.641266!10719-109I8;0.931071!10642-109A3;0.963651!10177-103C6;0.0944901!10164-103B2;0.8259!10173-103C2;0.846364!10166-103B4;0.978759!10083-102B2;0.902706!10188-103D8;0.835487!10552-107I3;0.684326!10553-107I4;0.418574!10013-101C4;0.614129!10536-107G5;0.939519!10618-108G6;0.502299!10423-106C9;0.587027!10785-110H2;0.681284!12238-129G6;0.595715!12239-129G7;0.655268!12240-129G8;0.683555!10416-106C2;0.535562!10801-110I9;0.914047!10766-110F1;0.903987!10824-111C5;0.988197!10825-111C6;0.650738!10826-111C7;0.80686!10454-106G4;0.792503!10409-106B4;0.64564!10638-108I8;0.903876!10636-108I6;0.499115!10513-107D9;0.745381!10420-106C6;0.765189!10082-102B1;0.509544!10014-101C5;0.669007!10070-101I7;0.453972!10452-106G2;0.742999!10453-106G3;0.548008!10449-106F8;0.557663!10042-101F6;0.585512!10069-101I6;0.995571!10193-103E4;0.497037!10631-108I1;0.608418!10438-106E6;0.683638!10488-107B2;0.821989!10196-103E7;0.218199!10071-101I8;0.151461!10071-101I8;0.811221!10041-101F5;0.230615!10451-106G1;0.691453!10450-106F9;0.182171!10604-108F1;0.429043!10605-108F2;0.834796!10606-108F3;0.898987!10603-108E9;0.870638!10497-107C2;0.898045!10448-106F7;0.392092!10643-109A4;0.307015!10426-106D3;0.483005!10431-106D8;0.91962!10197-103E8;0.986399!10443-106F2;0.475459!10815-111B5;0.367015!10816-111B6;0.438968!10817-111B7;0.845062!10015-101C6;0.549529!10410-106B5;0.69706!10054-101G9;0.256457!10758-110E2;0.842452!10711-109H9;0.847265!10040-101F4;0.445781!10470-106I2;0.738882!10415-106C1;0.824798!10198-103E9;0.660769!10614-108G2;0.828579!10612-108F9;0.830973!10549-107H9;0.423584!10615-108G3;0.871765!10487-107B1;0.263087!10433-106E1;0.268924!10688-109F4;0.889038!10444-106F3;0.920159!10444-106F3;0.427334!10485-107A8;0.534225!10413-106B8;0.273256!10175-103C4;0.276724!10161-103A8;0.550198!12131-128D7;0.805246!10624-108H3;0.598295!10712-109I1;0.42256!10205-103F7;0.937216!10206-103F8;0.446849!10207-103F9;0.920636!10050-101G5;0.814225!10051-101G6;0.784377!10016-101C7;0.756173!10046-101G1;0.939587!10778-110G4;0.219529!10633-108I3;0.629288!10818-111B8;0.71264!10819-111B9;0.0906356!10820-111C1;0.0438337!10484-107A7;0.0719699!10808-111A7;0.855665!10169-103B7;0.590654!10153-102I9;0.701993!13425-144D5;0.848594!13433-144E4;0.0990058!13437-144E8;0.0826196!11904-125F5;0.192572!11905-125F6;0.952433!10039-101F3;0.962268!10791-110H8;0.929631!10017-101C8;0.502018!10045-101F9;0.217572!10509-107D5;0.353753!10839-111E2;0.662507!10692-109F8;0.997296!10079-102A7;0.654213!10078-102A6;0.654947!10721-110A1;0.819915!10569-108B2;0.750106!10570-108B3;0.246397!10571-108B4;0.588226!10647-109A8;0.29347!10752-110D5;0.555086!10782-110G8;0.655472!10726-110A6;0.629444!10018-101C9;0.625964!10086-102B5;0.0237665!10182-103D2;0.142755!10165-103B3;0.86036!10499-107C4;0.821715!10408-106B3;0.615707!10019-101D1;0.606517!10068-101I5;0.993741!10075-102A3;0.305728!10077-102A5;0.985536!10727-110A7;0.820958!10775-110G1;0.628679!10412-106B7;0.836552!12231-129F8;0.973021!12232-129F9;0.000514886!12233-129G1;0.00548027!12234-129G2;0.0030618!10414-106B9;0.00500391!10170-103B8;0.731766!10183-103D3;0.524555!10150-102I6;0.705944!10174-103C3;0.828034!10155-103A2;0.799269!10038-101F2;0.83562!10838-111E1;0.90276!10759-110E3;0.532224!10514-107E1;0.644419!10465-106H6;0.981461!10691-109F7;0.686704!10843-111E6;0.834224!10844-111E7;0.909533!11747-123G1;0.995499!11748-123G2;0.464151!11749-123G3;0.90747!11750-123G4;0.587286!11751-123G5;0.323437!11840-124H4;0.373429!11752-123G6;0.386139!11753-123G7;0.418756!11754-123G8;0.352017!11755-123G9;0.992741!11756-123H1;0.748194!11833-124G6;0.728094!11760-123H5;0.889133!11836-124G9;0.551216!11758-123H3;0.812341!11835-124G8;0.966753!11762-123H7;0.362108!11838-124H2;0.882344!11757-123H2;0.844725!11759-123H4;0.796572!11761-123H6;0.632127!11842-124H6;0.678467!11837-124H1;0.883117!10568-108B1;0.364597!13230-141I8;0.149673!13231-141I9;0.821608!10696-109G3;0.878528!10493-107B7;0.728274!10494-107B8;0.602407!10850-111F4;0.772273!10851-111F5;0.260329!10852-111F6;0.95968!10853-111F7;0.521719!10854-111F8;0.221997!10855-111F9;0.563912!10856-111G1;0.641928!10847-111F1;0.566559!10846-111E9;0.895197!10848-111F2;0.203243!10845-111E8;0.0521714!10857-111G2;0.914264!10858-111G3;0.44656!10156-103A3;0.529163!11901-125F2;0.881843!11902-125F3;0.735864!11903-125F4;0.622465!10689-109F5;0.721772!10648-109A9;0.417647!10784-110H1;0.700841!10744-110C6;0.832696!10772-110F7;0.629581!10474-106I6;0.782496!10600-108E6;0.266025!10684-109E9;0.729042!12226-129F3;0.314202!12227-129F4;0.412173!10508-107D4;0.881475!10539-107G8;0.47617!10607-108F4;0.507827!10555-107I6;0.85609!10774-110F9;0.178777!10637-108I7;0.565492!10663-109C6;0.305707!10728-110A8;0.587111!10729-110A9;0.96045!10430-106D7;0.236486!10730-110B1;0.690674!10813-111B3;0.111151!10812-111B2;0.0733569!10037-101F1;0.654438!10172-103C1;0.829918!10163-103B1;0.614226!10076-102A4;0.920866!10073-102A1;0.741404!10036-101E9;0.326093!10195-103E6;0.907066!10277-104E7;0.75774!10434-106E2;0.554112!10550-107I1;0.8906!10545-107H5;0.335889!10544-107H4;0.657358!10704-109H2;0.742911!10510-107D6;0.567317!10558-107I9;0.260978!10020-101D2;0.485863!10732-110B3;0.866191!10049-101G4;0.944498!10698-109G5;0.021029!10437-106E5;0.904781!10417-106C3;0.717083!10035-101E8;0.589555!10171-103B9;0.689095!10157-103A4;0.612026!10034-101E7;0.798849!10072-101I9;0.783319!10199-103F1;0.189209!10200-103F2;0.290757!10697-109G4;0.556744!10723-110A3;0.314675!10179-103C8;0.935989!10160-103A7;0.805857!10180-103C9;0.697363!10162-103A9;0.189008!10021-101D3;0.276748!10840-111E3;0.81706!10706-109H4;0.988629!10033-101E6;0.653845!10032-101E5;0.536468!10490-107B4;0.754554!10439-106E7;0.596707!10022-101D4;0.85767!10176-103C5;0.893047!10469-106I1;0.59264!10067-101I4;0.407584!10411-106B6;0.418324!10471-106I3;0.968167!10030-101E3;0.0191002!10475-106I7;0.95757!10787-110H4;0.580895!10477-106I9;0.403055!10695-109G2;0.998869!11771-123I7;0.148501!11772-123I8;0.779756!11773-123I9;0.156699!10093-102C3;0.331855!10442-106F1;0.337538!10442-106F1;0.66383!10201-103F3;0.884309!10639-108I9;0.20104!11843-124H7;0.887742!11841-124H5;0.230893!10693-109F9;0.158857!10436-106E4;0.55696!10483-107A6;0.948872!10282-104F3;0.574239!10023-101D5;0.401697!10066-101I3;0.977398!10065-101I2;0.109511!10800-110I8;0.377937!10610-108F7;0.307745!10841-111E4;0.612209!10541-107H1;0.143771!10842-111E5;0.961337!10562-108A4;0.9867!10024-101D6;0.398922!10064-101I1;0.226433!10609-108F6;0.725824!10048-101G3;0.140629!10781-110G7;0.360404!10181-103D1;0.0750897!10159-103A6;0.90808!10056-101H2;0.912854!10737-110B8;0.792212!10025-101D7;0.514315!10044-101F8;0.959181!10424-106D1;0.421616!10463-106H4;0.654852!10616-108G4;0.825604!10486-107A9;0.735802!10062-101H8;0.426758!10202-103F4;0.543314!10158-103A5;0.572535!10441-106E9;0.65809!10031-101E4;0.488573!10063-101H9;0.937596!10063-101H9;0.296604!11763-123H8;0.982964!11765-123I1;0.939555!11768-123I4;0.774631!10807-111A6;0.975635!10790-110H7;0.407045!10798-110I6;0.947344!10786-110H3;0.995077!10591-108D6;0.940321!10593-108D8;0.607227!10590-108D5;0.578682!10026-101D8;0.918786!10096-102C6;0.408368!10168-103B6;0.0793865!10154-103A1;0.622064!10209-103G2;0.987759!10061-101H7;0.899613!10027-101D9;0.581496!10043-101F7;0.440153!10783-110G9;0.297516!10028-101E1;0.686015!10060-101H6;0.418316!10203-103F5;0.832057!10059-101H5;0.38042!10047-101G2;0.864838!10029-101E2;0.580235!10058-101H4;0.96348!10418-106C4;0.605418!10492-107B6;0.342595!10694-109G1;0.600177!10797-110I5;0.136565!10057-101H3;0.808446!10100-102D1;0.719541!10055-101H1;0.797064!10204-103F6;0.850597!10191-103E2;0.709272!10563-108A5;0.974534
|name=motif301
|name=motif301
|tomtom_result=Klf4#MA0039.1;1;0.000888336;0.422848;0.845695;8;CTTTTTTT;CCTTCCTTTA;-!AZF1#MA0277.1;3;0.0050205;2.38976;1;6;CTTTTTTT;TTTCTTTTT;-!hb#MA0049.1;0;0.0065045;3.09614;1;8;CTTTTTTT;TTTTTTATGC;-!CUP2#MA0287.1;0;0.007696;3.6633;1;8;CTTTTTTT;CATTTCTGCTG;-!MEF2A#MA0052.1;0;0.00931597;4.4344;1;8;CTTTTTTT;CTATTTATAG;+!FKH1#MA0296.1;4;0.0116327;5.53717;1;8;CTTTTTTT;TCCTCTTTGTTTACAATTCA;-!squamosa#MA0082.1;4;0.0124131;5.90865;1;8;CTTTTTTT;ATTTCCATTTTTGG;-!SOX10#MA0442.1;0;0.012812;6.0985;1;6;CTTTTTTT;CTTTGT;+!AGL3#MA0001.1;0;0.0142455;6.78087;1;8;CTTTTTTT;CTATTTATGG;-!Foxd3#MA0041.1;4;0.0189407;9.01579;1;8;CTTTTTTT;GAATGTTTGTTT;+
}}
}}

Latest revision as of 13:44, 7 September 2012

Full Name: motif301

Motif matrix
POACGT
01447914973036397023
02295532481176157492
03400778299863143172
04287795755931146488
0597853593916392102755
066404152526783136432
077934488311286995237
08269154692814153897

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Klf4#MA0039.110.0008883360.4228480.8456958CTTTTTTTCCTTCCTTTA-
AZF1#MA0277.130.00502052.3897616CTTTTTTTTTTCTTTTT-
hb#MA0049.100.00650453.0961418CTTTTTTTTTTTTTATGC-
CUP2#MA0287.100.0076963.663318CTTTTTTTCATTTCTGCTG-
MEF2A#MA0052.100.009315974.434418CTTTTTTTCTATTTATAG+
FKH1#MA0296.140.01163275.5371718CTTTTTTTTCCTCTTTGTTTACAATTCA-
squamosa#MA0082.140.01241315.9086518CTTTTTTTATTTCCATTTTTGG-
SOX10#MA0442.100.0128126.098516CTTTTTTTCTTTGT+
AGL3#MA0001.100.01424556.7808718CTTTTTTTCTATTTATGG-
Foxd3#MA0041.140.01894079.0157918CTTTTTTTGAATGTTTGTTT+
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