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MacroAPE 1083:CNhs11786 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;145.5801919997983;406.59911652958033;204.52979495159056;880.4015295498829!2;86.73142993249645;404.07903460287434;456.7098665109013;689.59030...")
 
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7!10828-111C9;0.921053!10788-110H5;0.608111!10792-110H9;0.634284!10765-110E9;0.88231!10829-111D1;0.95071!10830-111D2;0.830187!10831-111D3;0.908873!10832-111D4;0.706824!10833-111D5;0.977409!10764-110E8;0.847303!10770-110F5;0.358808!10399-106A3;0.917839!10400-106A4;0.486106!10405-106A9;0.539301!10834-111D6;0.554825!10835-111D7;0.995589!10836-111D8;0.609774!10837-111D9;0.840271!10699-109G6;0.493473!10802-111A1;0.587851!10796-110I4;0.603785!10010-101C1;0.0880368!10810-111A9;0.0189206!10421-106C7;0.635532!10708-109H6;0.893728!12235-129G3;0.0330367!12236-129G4;0.153759!12237-129G5;0.422332!10167-103B5;0.539949!10151-102I7;0.856977!10428-106D5;0.887183!10795-110I3;0.781284!10805-111A4;0.76249!10052-101G7;0.0541139!10189-103D9;0.316562!10589-108D4;0.0751853!10425-106D2;0.592204!10427-106D4;0.43972!10702-109G9;0.99702!10432-106D9;0.700113!10496-107C1;0.361404!10718-109I7;0.632619!10011-101C2;0.557502!10053-101G8;0.272088!10686-109F2;0.925253!10084-102B3;0.183014!10012-101C3;0.794341!10085-102B4;0.76235!10482-107A5;0.652749!10419-106C5;0.00452352!10080-102A8;0.0303632!10760-110E4;0.762533!10709-109H7;0.0250988!10710-109H8;0.358253!10703-109H1;0.00859498!10719-109I8;0.707565!10642-109A3;0.779541!10177-103C6;0.338072!10164-103B2;0.656683!10173-103C2;0.688569!10166-103B4;0.741939!10083-102B2;0.897353!10188-103D8;0.83625!10552-107I3;0.80356!10553-107I4;0.36834!10013-101C4;0.00449228!10536-107G5;0.299932!10618-108G6;0.906212!10423-106C9;0.0619587!10785-110H2;0.0285846!12238-129G6;0.0597055!12239-129G7;0.606934!12240-129G8;0.654945!10416-106C2;0.567869!10801-110I9;0.945293!10766-110F1;0.857352!10824-111C5;0.730141!10825-111C6;0.486659!10826-111C7;0.522625!10454-106G4;0.565427!10409-106B4;0.46483!10638-108I8;0.649116!10636-108I6;0.144819!10513-107D9;0.436546!10420-106C6;0.0730325!10082-102B1;0.192207!10014-101C5;0.532636!10070-101I7;0.425536!10452-106G2;0.444377!10453-106G3;0.437166!10449-106F8;0.456175!10042-101F6;0.425387!10069-101I6;0.821512!10193-103E4;0.0272037!10631-108I1;0.708282!10438-106E6;0.78285!10488-107B2;0.204192!10196-103E7;0.164973!10071-101I8;0.821601!10071-101I8;0.320506!10041-101F5;0.76002!10451-106G1;0.0656332!10450-106F9;0.145773!10604-108F1;0.146515!10605-108F2;0.0984228!10606-108F3;0.433993!10603-108E9;0.0905605!10497-107C2;0.0486771!10448-106F7;0.308735!10643-109A4;0.0365557!10426-106D3;0.0476711!10431-106D8;0.264835!10197-103E8;0.0771304!10443-106F2;0.193696!10815-111B5;0.348425!10816-111B6;0.313874!10817-111B7;0.232962!10015-101C6;0.272285!10410-106B5;0.149739!10054-101G9;0.440485!10758-110E2;0.214236!10711-109H9;0.337807!10040-101F4;0.212229!10470-106I2;0.767873!10415-106C1;0.109455!10198-103E9;0.747746!10614-108G2;0.350118!10612-108F9;0.000155818!10549-107H9;0.0573546!10615-108G3;0.246774!10487-107B1;0.349531!10433-106E1;0.631691!10688-109F4;0.274574!10444-106F3;0.0203378!10444-106F3;0.519281!10485-107A8;0.596696!10413-106B8;0.000182777!10175-103C4;0.32663!10161-103A8;0.63318!12131-128D7;0.622398!10624-108H3;0.813375!10712-109I1;0.225128!10205-103F7;0.945338!10206-103F8;0.0838931!10207-103F9;0.135643!10050-101G5;0.231851!10051-101G6;0.134868!10016-101C7;0.117882!10046-101G1;0.0711891!10778-110G4;0.0751541!10633-108I3;0.50439!10818-111B8;0.4268!10819-111B9;0.553947!10820-111C1;0.595843!10484-107A7;0.630763!10808-111A7;0.295591!10169-103B7;0.970549!10153-102I9;0.790981!13425-144D5;0.859116!13433-144E4;0.349812!13437-144E8;0.328831!11904-125F5;0.549762!11905-125F6;0.381783!10039-101F3;0.119244!10791-110H8;0.76721!10017-101C8;0.000845005!10045-101F9;0.224442!10509-107D5;0.468746!10839-111E2;0.966598!10692-109F8;0.342591!10079-102A7;0.0209109!10078-102A6;0.0724858!10721-110A1;0.01491!10569-108B2;0.0461374!10570-108B3;0.937007!10571-108B4;0.558158!10647-109A8;0.783857!10752-110D5;0.234743!10782-110G8;0.577478!10726-110A6;0.629215!10018-101C9;0.0626788!10086-102B5;0.0307432!10182-103D2;0.131329!10165-103B3;0.781888!10499-107C4;0.621812!10408-106B3;0.121575!10019-101D1;0.137316!10068-101I5;0.367752!10075-102A3;0.177353!10077-102A5;0.673634!10727-110A7;0.184386!10775-110G1;0.82981!10412-106B7;0.930186!12231-129F8;0.524745!12232-129F9;0.0839221!12233-129G1;0.0810814!12234-129G2;0.0705982!10414-106B9;0.189553!10170-103B8;0.250159!10183-103D3;0.762278!10150-102I6;0.753452!10174-103C3;0.809742!10155-103A2;0.493669!10038-101F2;0.623095!10838-111E1;0.549274!10759-110E3;0.42466!10514-107E1;0.0192473!10465-106H6;0.0574012!10691-109F7;0.0191496!10843-111E6;0.0741866!10844-111E7;0.309953!11747-123G1;0.864351!11748-123G2;0.865088!11749-123G3;0.885716!11750-123G4;0.721043!11751-123G5;0.782987!11840-124H4;0.535748!11752-123G6;0.206657!11753-123G7;0.347142!11754-123G8;0.793324!11755-123G9;0.661282!11756-123H1;0.647353!11833-124G6;0.824795!11760-123H5;0.810534!11836-124G9;0.70649!11758-123H3;0.398802!11835-124G8;0.664125!11762-123H7;0.188566!11838-124H2;0.546846!11757-123H2;0.517681!11759-123H4;0.434599!11761-123H6;0.667834!11842-124H6;0.73643!11837-124H1;0.680506!10568-108B1;0.416202!13230-141I8;0.176272!13231-141I9;0.0948058!10696-109G3;0.0931104!10493-107B7;0.193334!10494-107B8;0.269736!10850-111F4;0.0704484!10851-111F5;0.222711!10852-111F6;0.219715!10853-111F7;0.287946!10854-111F8;0.206719!10855-111F9;0.0151205!10856-111G1;0.850414!10847-111F1;0.290226!10846-111E9;0.0246806!10848-111F2;0.0474787!10845-111E8;0.122115!10857-111G2;0.304071!10858-111G3;0.430771!10156-103A3;0.230582!11901-125F2;0.797379!11902-125F3;0.584012!11903-125F4;0.363771!10689-109F5;0.48783!10648-109A9;0.219592!10784-110H1;0.629094!10744-110C6;0.101407!10772-110F7;0.994848!10474-106I6;0.473612!10600-108E6;0.790012!10684-109E9;0.190869!12226-129F3;0.0231119!12227-129F4;0.084734!10508-107D4;0.573937!10539-107G8;0.161494!10607-108F4;0.40434!10555-107I6;0.466971!10774-110F9;0.412594!10637-108I7;0.57778!10663-109C6;0.57356!10728-110A8;0.344714!10729-110A9;0.309215!10430-106D7;0.609703!10730-110B1;0.49033!10813-111B3;0.528249!10812-111B2;0.662891!10037-101F1;0.940297!10172-103C1;0.710743!10163-103B1;0.881004!10076-102A4;0.916235!10073-102A1;0.934597!10036-101E9;0.857879!10195-103E6;0.874913!10277-104E7;0.800475!10434-106E2;0.867962!10550-107I1;0.0524579!10545-107H5;0.104606!10544-107H4;0.246923!10704-109H2;0.0186289!10510-107D6;0.877724!10558-107I9;0.0273646!10020-101D2;0.0113304!10732-110B3;0.544608!10049-101G4;0.337892!10698-109G5;0.16196!10437-106E5;0.0226074!10417-106C3;0.0047004!10035-101E8;0.254543!10171-103B9;0.82198!10157-103A4;0.822966!10034-101E7;0.821292!10072-101I9;0.863498!10199-103F1;0.831504!10200-103F2;0.453407!10697-109G4;0.06289!10723-110A3;0.768917!10179-103C8;0.13334!10160-103A7;0.518751!10180-103C9;0.531308!10162-103A9;0.719973!10021-101D3;0.629675!10840-111E3;0.538464!10706-109H4;0.788332!10033-101E6;0.518848!10032-101E5;0.660769!10490-107B4;0.80636!10439-106E7;0.210454!10022-101D4;0.113273!10176-103C5;0.436065!10469-106I1;0.761892!10067-101I4;0.0477067!10411-106B6;0.635325!10471-106I3;0.228194!10030-101E3;0.317281!10475-106I7;0.349255!10787-110H4;0.208572!10477-106I9;0.75374!10695-109G2;0.87445!11771-123I7;0.809841!11772-123I8;0.129217!11773-123I9;0.396202!10093-102C3;0.748379!10442-106F1;0.307113!10442-106F1;0.0836127!10201-103F3;0.0881441!10639-108I9;0.829456!11843-124H7;0.10799!11841-124H5;0.177665!10693-109F9;0.784942!10436-106E4;0.49334!10483-107A6;0.700951!10282-104F3;0.313372!10023-101D5;0.0288852!10066-101I3;0.0150691!10065-101I2;0.107586!10800-110I8;0.152804!10610-108F7;0.125456!10841-111E4;0.145386!10541-107H1;0.439733!10842-111E5;0.610465!10562-108A4;0.854257!10024-101D6;0.371215!10064-101I1;0.649337!10609-108F6;0.367408!10048-101G3;0.0546747!10781-110G7;0.496116!10181-103D1;0.12673!10159-103A6;0.602146!10056-101H2;0.654415!10737-110B8;0.503683!10025-101D7;0.503425!10044-101F8;0.18063!10424-106D1;0.118097!10463-106H4;0.67143!10616-108G4;0.0130767!10486-107A9;0.318641!10062-101H8;0.381347!10202-103F4;0.302651!10158-103A5;0.0744497!10441-106E9;0.665917!10031-101E4;0.326393!10063-101H9;0.837185!10063-101H9;0.883218!11763-123H8;0.130632!11765-123I1;0.220479!11768-123I4;0.160254!10807-111A6;0.197125!10790-110H7;0.0929812!10798-110I6;0.364693!10786-110H3;0.431681!10591-108D6;0.127071!10593-108D8;0.647639!10590-108D5;0.316024!10026-101D8;0.714155!10096-102C6;0.596618!10168-103B6;0.623042!10154-103A1;0.665058!10209-103G2;0.6839!10061-101H7;0.034761!10027-101D9;0.0996292!10043-101F7;0.153057!10783-110G9;0.000938627!10028-101E1;0.160024!10060-101H6;0.0977665!10203-103F5;0.221689!10059-101H5;0.0358572!10047-101G2;0.0638847!10029-101E2;0.0623498!10058-101H4;0.11785!10418-106C4;0.106274!10492-107B6;0.0321114!10694-109G1;0.123685!10797-110I5;0.871022!10057-101H3;0.0296837!10100-102D1;0.071031!10055-101H1;0.245929!10204-103F6;0.434951!10191-103E2;0.777941!10563-108A5;0.00124777
|name=CNhs11786_bu_f1
|name=CNhs11786_bu_f1
|tomtom_result=RGM1#MA0366.1;-3;0.00119495;0.568798;0.603656;5;TTTTCCCTGTGC;CCCCT;-!REI1#MA0364.1;-3;0.00131037;0.623736;0.603656;7;TTTTCCCTGTGC;CCCCTGA;+!id1#MA0120.1;-1;0.00190679;0.90763;0.603656;11;TTTTCCCTGTGC;TTTTCCTTTTCG;+!MSN4#MA0342.1;-3;0.00264683;1.25989;0.628455;5;TTTTCCCTGTGC;CCCCT;-!MZF1_5-13#MA0057.1;0;0.00391741;1.86469;0.629427;10;TTTTCCCTGTGC;TTCCCCCTAC;-!MSN2#MA0341.1;-3;0.0042548;2.02529;0.629427;5;TTTTCCCTGTGC;CCCCT;-!INSM1#MA0155.1;0;0.00463911;2.20822;0.629427;12;TTTTCCCTGTGC;CGCCCCCTGACA;-!GIS1#MA0306.1;-2;0.00744572;3.54416;0.791275;9;TTTTCCCTGTGC;ACCCCTAAA;+!USV1#MA0413.1;3;0.00754157;3.58979;0.791275;12;TTTTCCCTGTGC;AAATTCCCCCTGAATTTGTG;+!RXR::RAR_DR5#MA0159.1;4;0.00919542;4.37702;0.791275;12;TTTTCCCTGTGC;TGACCTCTCCGTGACCT;-!RME1#MA0370.1;-3;0.009323;4.43775;0.791275;9;TTTTCCCTGTGC;TTCCTTTGGA;-!YML081W#MA0431.1;-2;0.010039;4.77855;0.791275;9;TTTTCCCTGTGC;ACCCCGCAC;+!STB3#MA0390.1;9;0.0109246;5.20011;0.791275;12;TTTTCCCTGTGC;GTCCAAAATTTTTCACTCTGG;+!Trl#MA0205.1;-1;0.0117612;5.59832;0.791275;10;TTTTCCCTGTGC;TTGCTCTCTC;+!ZMS1#MA0441.1;-1;0.0126565;6.02452;0.791275;9;TTTTCCCTGTGC;TTCCCCGCA;+!PPARG::RXRA#MA0065.2;-2;0.0135979;6.47261;0.791275;10;TTTTCCCTGTGC;TGACCTTTGCCCTAC;-!SPIB#MA0081.1;-3;0.0147249;7.00905;0.791275;7;TTTTCCCTGTGC;TTCCTCT;-!YER130C#MA0423.1;-2;0.0149966;7.13836;0.791275;9;TTTTCCCTGTGC;ACCCCTATT;+!Klf4#MA0039.1;0;0.017396;8.28048;0.82609;10;TTTTCCCTGTGC;CCTTCCTTTA;-!SP1#MA0079.2;-3;0.017396;8.28048;0.82609;9;TTTTCCCTGTGC;CCCCGCCCCC;+!HMG-I/Y#MA0045.1;2;0.0203147;9.6698;0.860917;12;TTTTCCCTGTGC;GTTTTTCCATTTGTTG;-!YJL103C#MA0427.1;-1;0.0203417;9.68265;0.860917;11;TTTTCCCTGTGC;AGCTCCGGAGA;+!ELF5#MA0136.1;0;0.0208488;9.92401;0.860917;9;TTTTCCCTGTGC;TACTTCCTT;+
}}
}}

Latest revision as of 13:48, 7 September 2012

Full Name: CNhs11786_bu_f1

Motif matrix
POACGT
1145.5801919997983406.59911652958033204.52979495159056880.4015295498829
286.73142993249645404.07903460287434456.7098665109013689.5903019845804
321.82680122283221657.1327862946486198.32295328255594759.8280922308159
4102.91920383302707704.406630269762830.42650875000806799.3582901780545
520.0007931253105161241.646399514282261.4309905605689314.0324498306913
67.1757881674637591627.06304219687380.121913246971572562.7498894195437393
70.81532271724358361636.14520106569260.00.1501092479166944
861.040629934787871.96088584984669771.50326634262042181572.605850903598
915.319867093866135525.1843981897072745.062644506093351.54372324118617
10581.60812656215341.95308081862316109.53863664542384904.0107890046527
1137.541499593862234545.4086150099603720.0424452963814334.1180731306488
12301.11046488763961190.129470738317798.93600598792746.93469141696729

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RGM1#MA0366.1-30.001194950.5687980.6036565TTTTCCCTGTGCCCCCT-
REI1#MA0364.1-30.001310370.6237360.6036567TTTTCCCTGTGCCCCCTGA+
id1#MA0120.1-10.001906790.907630.60365611TTTTCCCTGTGCTTTTCCTTTTCG+
MSN4#MA0342.1-30.002646831.259890.6284555TTTTCCCTGTGCCCCCT-
MZF1_5-13#MA0057.100.003917411.864690.62942710TTTTCCCTGTGCTTCCCCCTAC-
MSN2#MA0341.1-30.00425482.025290.6294275TTTTCCCTGTGCCCCCT-
INSM1#MA0155.100.004639112.208220.62942712TTTTCCCTGTGCCGCCCCCTGACA-
GIS1#MA0306.1-20.007445723.544160.7912759TTTTCCCTGTGCACCCCTAAA+
USV1#MA0413.130.007541573.589790.79127512TTTTCCCTGTGCAAATTCCCCCTGAATTTGTG+
RXR::RAR_DR5#MA0159.140.009195424.377020.79127512TTTTCCCTGTGCTGACCTCTCCGTGACCT-
RME1#MA0370.1-30.0093234.437750.7912759TTTTCCCTGTGCTTCCTTTGGA-
YML081W#MA0431.1-20.0100394.778550.7912759TTTTCCCTGTGCACCCCGCAC+
STB3#MA0390.190.01092465.200110.79127512TTTTCCCTGTGCGTCCAAAATTTTTCACTCTGG+
Trl#MA0205.1-10.01176125.598320.79127510TTTTCCCTGTGCTTGCTCTCTC+
ZMS1#MA0441.1-10.01265656.024520.7912759TTTTCCCTGTGCTTCCCCGCA+
PPARG::RXRA#MA0065.2-20.01359796.472610.79127510TTTTCCCTGTGCTGACCTTTGCCCTAC-
SPIB#MA0081.1-30.01472497.009050.7912757TTTTCCCTGTGCTTCCTCT-
YER130C#MA0423.1-20.01499667.138360.7912759TTTTCCCTGTGCACCCCTATT+
Klf4#MA0039.100.0173968.280480.8260910TTTTCCCTGTGCCCTTCCTTTA-
SP1#MA0079.2-30.0173968.280480.826099TTTTCCCTGTGCCCCCGCCCCC+
HMG-I/Y#MA0045.120.02031479.66980.86091712TTTTCCCTGTGCGTTTTTCCATTTGTTG-
YJL103C#MA0427.1-10.02034179.682650.86091711TTTTCCCTGTGCAGCTCCGGAGA+
ELF5#MA0136.100.02084889.924010.8609179TTTTCCCTGTGCTACTTCCTT+
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