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MacroAPE 1083:Motif ACNGGT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;256;0;0;0!02;0;256;0;0!03;64;64;64;64!04;0;0;256;0!05;0;0;256;0!06;0;0;0;256 |macroape_1083_sample_pvalues=11376-118A8;0.339599!11327-117E...")
 
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89-110H6;0.954009!10828-111C9;0.500926!10788-110H5;0.386234!10792-110H9;0.827196!10765-110E9;0.744184!10829-111D1;0.946174!10830-111D2;0.809177!10831-111D3;0.930783!10832-111D4;0.76027!10833-111D5;0.871229!10764-110E8;0.899768!10770-110F5;0.75121!10399-106A3;0.683542!10400-106A4;0.667717!10405-106A9;0.620636!10834-111D6;0.608566!10835-111D7;0.962979!10836-111D8;0.859621!10837-111D9;0.326266!10699-109G6;0.776889!10802-111A1;0.910124!10796-110I4;0.684307!10010-101C1;0.0591936!10810-111A9;0.636152!10421-106C7;0.639855!10708-109H6;0.106541!12235-129G3;0.73192!12236-129G4;0.0125893!12237-129G5;0.162866!10167-103B5;0.0163521!10151-102I7;0.250075!10428-106D5;0.274201!10795-110I3;0.617056!10805-111A4;0.561209!10052-101G7;0.369636!10189-103D9;0.866902!10589-108D4;0.711912!10425-106D2;0.948064!10427-106D4;0.471786!10702-109G9;0.443733!10432-106D9;0.349486!10496-107C1;0.016763!10718-109I7;0.0453366!10011-101C2;0.813573!10053-101G8;0.607564!10686-109F2;0.772139!10084-102B3;0.0277848!10012-101C3;0.317411!10085-102B4;0.335908!10482-107A5;0.127805!10419-106C5;0.364462!10080-102A8;0.0881872!10760-110E4;0.978821!10709-109H7;0.132119!10710-109H8;0.0395504!10703-109H1;0.0617977!10719-109I8;0.227862!10642-109A3;0.557563!10177-103C6;0.037739!10164-103B2;0.362706!10173-103C2;0.398742!10166-103B4;0.343526!10083-102B2;0.362351!10188-103D8;0.383074!10552-107I3;0.350898!10553-107I4;0.901321!10013-101C4;0.0260363!10536-107G5;0.529109!10618-108G6;0.843676!10423-106C9;0.431943!10785-110H2;0.138854!12238-129G6;0.245365!12239-129G7;0.057073!12240-129G8;0.102392!10416-106C2;0.0988763!10801-110I9;0.964865!10766-110F1;0.988722!10824-111C5;0.887403!10825-111C6;0.841644!10826-111C7;0.81609!10454-106G4;0.802365!10409-106B4;0.84538!10638-108I8;0.945741!10636-108I6;0.119028!10513-107D9;0.096477!10420-106C6;0.357462!10082-102B1;0.993164!10014-101C5;0.364108!10070-101I7;0.291356!10452-106G2;0.708076!10453-106G3;0.733718!10449-106F8;0.86045!10042-101F6;0.986791!10069-101I6;0.251826!10193-103E4;0.426705!10631-108I1;0.327945!10438-106E6;0.979223!10488-107B2;0.0234918!10196-103E7;0.827228!10071-101I8;0.0730654!10071-101I8;0.647613!10041-101F5;0.115288!10451-106G1;0.333951!10450-106F9;0.425501!10604-108F1;0.448835!10605-108F2;0.914196!10606-108F3;0.551285!10603-108E9;0.883317!10497-107C2;0.726952!10448-106F7;0.045972!10643-109A4;0.936656!10426-106D3;0.0545547!10431-106D8;0.0824682!10197-103E8;0.15252!10443-106F2;0.356554!10815-111B5;0.228205!10816-111B6;0.564806!10817-111B7;0.592508!10015-101C6;0.528334!10410-106B5;0.0705932!10054-101G9;0.744878!10758-110E2;0.91461!10711-109H9;0.640889!10040-101F4;0.73668!10470-106I2;0.297125!10415-106C1;0.02633!10198-103E9;0.0254996!10614-108G2;0.569545!10612-108F9;0.187652!10549-107H9;0.0500644!10615-108G3;0.472519!10487-107B1;0.267842!10433-106E1;0.518782!10688-109F4;0.739006!10444-106F3;0.0443312!10444-106F3;0.776811!10485-107A8;0.801639!10413-106B8;0.391455!10175-103C4;0.00548258!10161-103A8;0.202202!12131-128D7;0.196943!10624-108H3;0.706462!10712-109I1;0.428752!10205-103F7;0.860319!10206-103F8;0.330293!10207-103F9;0.253602!10050-101G5;0.271737!10051-101G6;0.201849!10016-101C7;0.450377!10046-101G1;0.318817!10778-110G4;0.143692!10633-108I3;0.146801!10818-111B8;0.870245!10819-111B9;0.713122!10820-111C1;0.697882!10484-107A7;0.708473!10808-111A7;0.791102!10169-103B7;0.955166!10153-102I9;0.311922!13425-144D5;0.301908!13433-144E4;0.633112!13437-144E8;0.573999!11904-125F5;0.735563!11905-125F6;0.173002!10039-101F3;0.11304!10791-110H8;0.301385!10017-101C8;0.0939214!10045-101F9;0.12466!10509-107D5;0.635089!10839-111E2;0.769615!10692-109F8;0.861451!10079-102A7;0.169752!10078-102A6;0.482203!10721-110A1;0.395901!10569-108B2;0.501317!10570-108B3;0.777309!10571-108B4;0.968514!10647-109A8;0.891004!10752-110D5;0.203479!10782-110G8;0.893784!10726-110A6;0.111876!10018-101C9;0.246726!10086-102B5;0.961165!10182-103D2;0.510795!10165-103B3;0.260771!10499-107C4;0.296425!10408-106B3;0.292814!10019-101D1;0.0192884!10068-101I5;0.245415!10075-102A3;0.523827!10077-102A5;0.255502!10727-110A7;0.58366!10775-110G1;0.337797!10412-106B7;0.575511!12231-129F8;0.112406!12232-129F9;0.144088!12233-129G1;0.161235!12234-129G2;0.102749!10414-106B9;0.130419!10170-103B8;0.0903844!10183-103D3;0.281524!10150-102I6;0.316667!10174-103C3;0.304484!10155-103A2;0.55628!10038-101F2;0.44178!10838-111E1;0.390996!10759-110E3;0.138748!10514-107E1;0.678893!10465-106H6;0.32489!10691-109F7;0.373395!10843-111E6;0.452211!10844-111E7;0.898716!11747-123G1;0.846245!11748-123G2;0.496372!11749-123G3;0.118955!11750-123G4;0.908317!11751-123G5;0.964233!11840-124H4;0.570683!11752-123G6;0.785553!11753-123G7;0.638427!11754-123G8;0.502072!11755-123G9;0.220589!11756-123H1;0.454904!11833-124G6;0.587057!11760-123H5;0.475321!11836-124G9;0.577964!11758-123H3;0.51888!11835-124G8;0.618805!11762-123H7;0.754289!11838-124H2;0.887091!11757-123H2;0.848444!11759-123H4;0.766019!11761-123H6;0.23657!11842-124H6;0.902523!11837-124H1;0.904328!10568-108B1;0.82247!13230-141I8;0.961901!13231-141I9;0.417898!10696-109G3;0.290103!10493-107B7;0.0954263!10494-107B8;0.571537!10850-111F4;0.312778!10851-111F5;0.379394!10852-111F6;0.717242!10853-111F7;0.794411!10854-111F8;0.750642!10855-111F9;0.959718!10856-111G1;0.579303!10847-111F1;0.396906!10846-111E9;0.539652!10848-111F2;0.386235!10845-111E8;0.496933!10857-111G2;0.600977!10858-111G3;0.735249!10156-103A3;0.579743!11901-125F2;0.290369!11902-125F3;0.108083!11903-125F4;0.147847!10689-109F5;0.0776345!10648-109A9;0.191287!10784-110H1;0.94293!10744-110C6;0.109211!10772-110F7;0.392572!10474-106I6;0.914609!10600-108E6;0.520909!10684-109E9;0.211523!12226-129F3;0.341536!12227-129F4;0.0141283!10508-107D4;0.199373!10539-107G8;0.124601!10607-108F4;0.163075!10555-107I6;0.699056!10774-110F9;0.0788161!10637-108I7;0.42137!10663-109C6;0.378921!10728-110A8;0.289326!10729-110A9;0.145119!10430-106D7;0.118696!10730-110B1;0.801008!10813-111B3;0.945401!10812-111B2;0.0489315!10037-101F1;0.0786266!10172-103C1;0.312505!10163-103B1;0.23519!10076-102A4;0.287219!10073-102A1;0.235116!10036-101E9;0.104402!10195-103E6;0.302683!10277-104E7;0.302678!10434-106E2;0.21578!10550-107I1;0.102021!10545-107H5;0.0992425!10544-107H4;0.131038!10704-109H2;0.179827!10510-107D6;0.0759742!10558-107I9;0.160852!10020-101D2;0.0248628!10732-110B3;0.595216!10049-101G4;0.382683!10698-109G5;0.0172712!10437-106E5;0.311587!10417-106C3;0.336581!10035-101E8;0.00771673!10171-103B9;0.288367!10157-103A4;0.262154!10034-101E7;0.313916!10072-101I9;0.271663!10199-103F1;0.0848064!10200-103F2;0.0432308!10697-109G4;0.554998!10723-110A3;0.268121!10179-103C8;0.0190144!10160-103A7;0.454987!10180-103C9;0.449911!10162-103A9;0.924436!10021-101D3;0.750819!10840-111E3;0.339687!10706-109H4;0.563959!10033-101E6;0.412546!10032-101E5;0.280795!10490-107B4;0.291784!10439-106E7;0.238589!10022-101D4;0.0360393!10176-103C5;0.433407!10469-106I1;0.249368!10067-101I4;0.0539205!10411-106B6;0.499253!10471-106I3;0.517611!10030-101E3;0.496007!10475-106I7;0.518542!10787-110H4;0.452604!10477-106I9;0.964457!10695-109G2;0.215482!11771-123I7;0.0820165!11772-123I8;0.0660055!11773-123I9;0.174536!10093-102C3;0.0114616!10442-106F1;0.0145351!10442-106F1;0.792529!10201-103F3;0.598499!10639-108I9;0.080132!11843-124H7;0.0165598!11841-124H5;0.811615!10693-109F9;0.703677!10436-106E4;0.26714!10483-107A6;0.0821098!10282-104F3;0.0780461!10023-101D5;0.778132!10066-101I3;0.98796!10065-101I2;0.150314!10800-110I8;0.394678!10610-108F7;0.661283!10841-111E4;0.947161!10541-107H1;0.272933!10842-111E5;0.325419!10562-108A4;0.253003!10024-101D6;0.654466!10064-101I1;0.110756!10609-108F6;0.568165!10048-101G3;0.0621828!10781-110G7;0.409279!10181-103D1;0.356126!10159-103A6;0.348838!10056-101H2;0.299941!10737-110B8;0.332954!10025-101D7;0.0737504!10044-101F8;0.809989!10424-106D1;0.432465!10463-106H4;0.298529!10616-108G4;0.0498011!10486-107A9;0.0052084!10062-101H8;0.0783933!10202-103F4;0.800556!10158-103A5;0.0660007!10441-106E9;0.241072!10031-101E4;0.0963975!10063-101H9;0.293561!10063-101H9;0.0833125!11763-123H8;0.77319!11765-123I1;0.544093!11768-123I4;0.50321!10807-111A6;0.467151!10790-110H7;0.243909!10798-110I6;0.414735!10786-110H3;0.289541!10591-108D6;0.410919!10593-108D8;0.677342!10590-108D5;0.549053!10026-101D8;0.5207!10096-102C6;0.965216!10168-103B6;0.583698!10154-103A1;0.285203!10209-103G2;0.244249!10061-101H7;0.184802!10027-101D9;0.764748!10043-101F7;0.696045!10783-110G9;0.842373!10028-101E1;0.118188!10060-101H6;0.174352!10203-103F5;0.876818!10059-101H5;0.105949!10047-101G2;0.342514!10029-101E2;0.0354643!10058-101H4;0.0860558!10418-106C4;0.404938!10492-107B6;0.0804933!10694-109G1;0.5192!10797-110I5;0.0937611!10057-101H3;0.50522!10100-102D1;0.657692!10055-101H1;0.763789!10204-103F6;0.743403!10191-103E2;0.931131!10563-108A5;0.900147
|name=motif_ACNGGT
|name=motif_ACNGGT
|tomtom_result=sna#MA0086.1;-1;0.0109076;5.19202;1;5;ACAGGT;CAGGTG;+!MET4#MA0335.1;2;0.0154979;7.37701;1;6;ACAGGT;CCACAGTT;-!myb.Ph3#MA0054.1;2;0.0171277;8.15276;1;6;ACAGGT;AAACGGTTA;-
}}
}}

Latest revision as of 13:50, 7 September 2012

Full Name: motif_ACNGGT

Motif matrix
POACGT
01256000
02025600
0364646464
04002560
05002560
06000256

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
sna#MA0086.1-10.01090765.1920215ACAGGTCAGGTG+
MET4#MA0335.120.01549797.3770116ACAGGTCCACAGTT-
myb.Ph3#MA0054.120.01712778.1527616ACAGGTAAACGGTTA-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_ACNGGT&oldid=2134144"