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MacroAPE 1083:TMCGYCR,motif946: Difference between revisions

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40-118H9;0.0129252!11532-120A2;0.00507054!11693-123A1;0.000653734!11292-117A5;0.00220446!11369-118A1;0.615678!11441-118I1;0.000623779!10007-101B4;0.0320207!11520-119H8;0.175789!11600-120H7;0.000203045!11681-122H7;0.00287422!11216-116B1;0.0120169!12179-129A1;0.866323!12180-129A2;0.408558!12181-129A3;0.378473!12176-128I7;0.192838!12177-128I8;0.155817!12182-129A4;0.210937!12183-129A5;0.453022!12184-129A6;0.4005!10809-111A8;0.192908!10597-108E3;0.199147!10717-109I6;0.00508239!10455-106G5;0.35856!10534-107G3;0.162775!10429-106D6;0.0478345!10464-106H5;0.0100329!10827-111C8;0.114855!10789-110H6;0.146702!10828-111C9;0.19914!10788-110H5;0.524251!10792-110H9;0.11741!10765-110E9;0.175351!10829-111D1;0.114001!10830-111D2;0.113308!10831-111D3;0.0477746!10832-111D4;0.0900627!10833-111D5;0.0924773!10764-110E8;0.0682928!10770-110F5;0.161826!10399-106A3;0.253985!10400-106A4;0.104231!10405-106A9;0.14409!10834-111D6;0.119195!10835-111D7;0.182576!10836-111D8;0.0406465!10837-111D9;0.0225859!10699-109G6;0.321082!10802-111A1;0.0412012!10796-110I4;0.0381399!10010-101C1;0.138975!10810-111A9;0.21408!10421-106C7;0.0555667!10708-109H6;0.0965286!12235-129G3;0.429332!12236-129G4;0.33535!12237-129G5;0.444301!10167-103B5;0.060021!10151-102I7;0.627513!10428-106D5;0.577058!10795-110I3;0.42928!10805-111A4;0.114612!10052-101G7;0.0123636!10189-103D9;0.152556!10589-108D4;0.292913!10425-106D2;0.0126779!10427-106D4;0.181472!10702-109G9;0.0813651!10432-106D9;0.00378602!10496-107C1;0.212629!10718-109I7;0.00338995!10011-101C2;0.322968!10053-101G8;0.424199!10686-109F2;0.164066!10084-102B3;0.694056!10012-101C3;0.240444!10085-102B4;0.434471!10482-107A5;0.682546!10419-106C5;0.0224609!10080-102A8;0.0146773!10760-110E4;0.189776!10709-109H7;0.52557!10710-109H8;0.0560829!10703-109H1;0.00846537!10719-109I8;0.44495!10642-109A3;0.0490304!10177-103C6;0.182442!10164-103B2;0.621665!10173-103C2;0.786545!10166-103B4;0.613387!10083-102B2;0.775219!10188-103D8;0.753129!10552-107I3;0.479078!10553-107I4;0.040978!10013-101C4;0.0224263!10536-107G5;0.274068!10618-108G6;0.600744!10423-106C9;0.0340861!10785-110H2;0.00643383!12238-129G6;0.00355997!12239-129G7;0.501208!12240-129G8;0.00389298!10416-106C2;0.691527!10801-110I9;0.21302!10766-110F1;0.343653!10824-111C5;0.163446!10825-111C6;0.053561!10826-111C7;0.0449224!10454-106G4;0.0451233!10409-106B4;0.0539887!10638-108I8;0.0353445!10636-108I6;0.620059!10513-107D9;0.0439485!10420-106C6;0.0229024!10082-102B1;0.0335739!10014-101C5;0.121855!10070-101I7;0.217002!10452-106G2;0.149449!10453-106G3;0.00570801!10449-106F8;0.0521549!10042-101F6;0.0482858!10069-101I6;0.337478!10193-103E4;0.355084!10631-108I1;0.411223!10438-106E6;0.102491!10488-107B2;0.00181397!10196-103E7;0.108899!10071-101I8;0.426253!10071-101I8;0.138424!10041-101F5;0.892716!10451-106G1;0.137982!10450-106F9;0.0404158!10604-108F1;0.108872!10605-108F2;0.187103!10606-108F3;0.479028!10603-108E9;0.0997226!10497-107C2;0.0862368!10448-106F7;0.186909!10643-109A4;0.034322!10426-106D3;0.288189!10431-106D8;0.0633244!10197-103E8;0.294237!10443-106F2;0.12365!10815-111B5;0.736658!10816-111B6;0.0126994!10817-111B7;0.00445673!10015-101C6;0.0175504!10410-106B5;0.155512!10054-101G9;0.000779688!10758-110E2;0.185971!10711-109H9;0.97308!10040-101F4;0.41378!10470-106I2;0.57599!10415-106C1;0.271801!10198-103E9;0.511266!10614-108G2;0.142399!10612-108F9;0.748002!10549-107H9;0.0432333!10615-108G3;0.0176155!10487-107B1;0.00150648!10433-106E1;0.111732!10688-109F4;0.167998!10444-106F3;0.00270898!10444-106F3;0.817848!10485-107A8;0.7025!10413-106B8;0.227681!10175-103C4;0.141957!10161-103A8;0.506382!12131-128D7;0.602316!10624-108H3;0.00206119!10712-109I1;0.446709!10205-103F7;0.102391!10206-103F8;0.399543!10207-103F9;0.487765!10050-101G5;0.985117!10051-101G6;0.248781!10016-101C7;0.292382!10046-101G1;0.462257!10778-110G4;0.697074!10633-108I3;0.0542222!10818-111B8;0.026009!10819-111B9;0.0349379!10820-111C1;0.0449526!10484-107A7;0.0275911!10808-111A7;0.0195817!10169-103B7;0.116842!10153-102I9;0.55066!13425-144D5;0.523781!13433-144E4;0.415816!13437-144E8;0.506358!11904-125F5;0.371149!11905-125F6;0.00116036!10039-101F3;0.00360428!10791-110H8;0.526477!10017-101C8;0.179218!10045-101F9;0.120211!10509-107D5;0.166405!10839-111E2;0.00672142!10692-109F8;0.348338!10079-102A7;0.335879!10078-102A6;0.0882951!10721-110A1;0.293066!10569-108B2;0.0260481!10570-108B3;4.90192e-05!10571-108B4;0.000352286!10647-109A8;0.00029003!10752-110D5;0.925683!10782-110G8;0.166467!10726-110A6;0.189614!10018-101C9;0.952695!10086-102B5;0.614323!10182-103D2;0.215971!10165-103B3;0.405074!10499-107C4;0.488684!10408-106B3;0.132515!10019-101D1;0.641131!10068-101I5;0.180705!10075-102A3;0.551925!10077-102A5;0.148047!10727-110A7;0.0587909!10775-110G1;0.0462989!10412-106B7;0.0259883!12231-129F8;0.0124193!12232-129F9;0.244395!12233-129G1;0.568164!12234-129G2;0.250246!10414-106B9;0.00713011!10170-103B8;0.0354764!10183-103D3;0.711703!10150-102I6;0.614328!10174-103C3;0.615864!10155-103A2;0.228681!10038-101F2;0.395854!10838-111E1;0.218111!10759-110E3;0.0139379!10514-107E1;0.261451!10465-106H6;0.194024!10691-109F7;0.100474!10843-111E6;0.774783!10844-111E7;0.0640287!11747-123G1;0.183427!11748-123G2;0.0161642!11749-123G3;0.0188471!11750-123G4;0.00152648!11751-123G5;0.0195783!11840-124H4;0.00649297!11752-123G6;0.0421219!11753-123G7;0.0232989!11754-123G8;0.000897232!11755-123G9;0.0111266!11756-123H1;0.117588!11833-124G6;0.00432247!11760-123H5;0.0465699!11836-124G9;0.000364107!11758-123H3;0.000970528!11835-124G8;8.07034e-06!11762-123H7;0.00243168!11838-124H2;0.000316335!11757-123H2;4.94816e-05!11759-123H4;0.034829!11761-123H6;0.040258!11842-124H6;4.16578e-05!11837-124H1;0.00240938!10568-108B1;0.000832686!13230-141I8;0.289358!13231-141I9;0.0037134!10696-109G3;0.00369735!10493-107B7;0.824845!10494-107B8;0.931601!10850-111F4;0.112694!10851-111F5;0.803356!10852-111F6;0.935853!10853-111F7;0.310867!10854-111F8;0.577698!10855-111F9;0.849803!10856-111G1;0.0309054!10847-111F1;0.161143!10846-111E9;0.0396103!10848-111F2;0.874174!10845-111E8;0.910932!10857-111G2;0.324328!10858-111G3;0.337918!10156-103A3;0.725962!11901-125F2;0.624021!11902-125F3;0.00679287!11903-125F4;0.0192704!10689-109F5;0.0856671!10648-109A9;0.759213!10784-110H1;0.834241!10744-110C6;0.0452445!10772-110F7;0.0600862!10474-106I6;0.269695!10600-108E6;0.235253!10684-109E9;0.373225!12226-129F3;0.693409!12227-129F4;0.292377!10508-107D4;0.312242!10539-107G8;0.021354!10607-108F4;0.0740301!10555-107I6;0.0291039!10774-110F9;0.0273978!10637-108I7;0.203111!10663-109C6;0.00131347!10728-110A8;0.0248822!10729-110A9;0.0437938!10430-106D7;0.0144238!10730-110B1;0.00224549!10813-111B3;0.0508628!10812-111B2;0.0415124!10037-101F1;0.00512868!10172-103C1;0.541395!10163-103B1;0.857691!10076-102A4;0.644472!10073-102A1;0.43908!10036-101E9;0.854716!10195-103E6;0.363244!10277-104E7;0.500505!10434-106E2;0.783459!10550-107I1;0.102371!10545-107H5;0.0845052!10544-107H4;0.0610387!10704-109H2;0.0273475!10510-107D6;0.560493!10558-107I9;0.24661!10020-101D2;0.552861!10732-110B3;0.389449!10049-101G4;0.0759864!10698-109G5;0.975877!10437-106E5;0.00670892!10417-106C3;0.815998!10035-101E8;0.0577959!10171-103B9;0.493589!10157-103A4;0.727151!10034-101E7;0.666418!10072-101I9;0.475111!10199-103F1;0.792516!10200-103F2;0.365689!10697-109G4;0.24333!10723-110A3;0.00507517!10179-103C8;0.465009!10160-103A7;0.746629!10180-103C9;0.681961!10162-103A9;0.247981!10021-101D3;0.117468!10840-111E3;0.360764!10706-109H4;0.11521!10033-101E6;0.1814!10032-101E5;0.394863!10490-107B4;0.433804!10439-106E7;0.300448!10022-101D4;0.269282!10176-103C5;0.310591!10469-106I1;0.979802!10067-101I4;0.0807092!10411-106B6;0.244473!10471-106I3;0.603093!10030-101E3;0.785756!10475-106I7;0.269197!10787-110H4;0.017269!10477-106I9;0.14595!10695-109G2;0.00948107!11771-123I7;0.844696!11772-123I8;0.35152!11773-123I9;0.241307!10093-102C3;0.0990388!10442-106F1;0.31243!10442-106F1;0.338341!10201-103F3;0.343011!10639-108I9;0.786219!11843-124H7;0.244112!11841-124H5;0.463836!10693-109F9;0.578316!10436-106E4;0.29271!10483-107A6;0.103919!10282-104F3;0.0653957!10023-101D5;0.126927!10066-101I3;0.953859!10065-101I2;0.0934031!10800-110I8;0.189572!10610-108F7;0.18789!10841-111E4;0.00485434!10541-107H1;0.0083441!10842-111E5;0.011495!10562-108A4;0.0182194!10024-101D6;0.488355!10064-101I1;0.22145!10609-108F6;0.109947!10048-101G3;0.19684!10781-110G7;0.927864!10181-103D1;0.00367353!10159-103A6;0.279507!10056-101H2;0.45795!10737-110B8;0.16068!10025-101D7;0.0534428!10044-101F8;0.0842864!10424-106D1;0.0711393!10463-106H4;0.103682!10616-108G4;0.0200903!10486-107A9;0.820807!10062-101H8;0.0444003!10202-103F4;0.696068!10158-103A5;0.360331!10441-106E9;0.566899!10031-101E4;0.242297!10063-101H9;0.325715!10063-101H9;0.90324!11763-123H8;0.187252!11765-123I1;0.00201815!11768-123I4;0.00100535!10807-111A6;0.000259879!10790-110H7;0.0145605!10798-110I6;0.00492345!10786-110H3;0.293953!10591-108D6;0.0397752!10593-108D8;0.00672971!10590-108D5;0.00694947!10026-101D8;0.0167968!10096-102C6;0.208343!10168-103B6;0.64061!10154-103A1;0.509455!10209-103G2;0.629824!10061-101H7;0.192769!10027-101D9;0.230845!10043-101F7;0.0280853!10783-110G9;0.470424!10028-101E1;0.571831!10060-101H6;0.534394!10203-103F5;0.611533!10059-101H5;0.196645!10047-101G2;0.294889!10029-101E2;0.127594!10058-101H4;0.135939!10418-106C4;0.224853!10492-107B6;0.0205286!10694-109G1;0.105458!10797-110I5;0.872431!10057-101H3;0.110708!10100-102D1;0.277181!10055-101H1;0.232857!10204-103F6;0.10456!10191-103E2;0.70976!10563-108A5;0.164473
|name=TMCGYCR,motif946,CNhs13539,T:982.0(38.46%),B:21767.3(28.45%),P:1e-27
|name=TMCGYCR,motif946,CNhs13539,T:982.0(38.46%),B:21767.3(28.45%),P:1e-27
|tomtom_result=TGA1A#MA0129.1;0;0.000848434;0.403855;0.47626;7;TACGCCA;TACGTCA;+!CST6#MA0286.1;1;0.00149098;0.709708;0.47626;7;TACGCCA;TTACGTCAT;-!CHA4#MA0283.1;2;0.00150082;0.714389;0.47626;6;TACGCCA;TCTCCGCC;-!YPR015C#MA0435.1;10;0.00491671;2.34035;1;7;TACGCCA;TGTAAGGATTTACGTCTTCA;-!CREB1#MA0018.2;0;0.00957808;4.55917;1;7;TACGCCA;GACGTCACCAGG;-!HLF#MA0043.1;3;0.00957808;4.55917;1;7;TACGCCA;GGTTACGCAATT;+!CREB1#MA0018.2;1;0.0108192;5.14996;1;7;TACGCCA;TGACGTCA;-!bZIP910#MA0096.1;-1;0.0109505;5.21242;1;6;TACGCCA;ACGTCAT;-!PDR8#MA0354.1;3;0.0138092;6.57319;1;5;TACGCCA;ATCTCCGT;-!YKL222C#MA0428.1;3;0.0141457;6.73337;1;6;TACGCCA;ATTTCCGTT;-!btd#MA0443.1;0;0.015529;7.3918;1;7;TACGCCA;TCCGCCCCCT;-!RPN4#MA0373.1;-2;0.0171532;8.16493;1;5;TACGCCA;CGCCACC;-!FHL1#MA0295.1;2;0.017641;8.39713;1;6;TACGCCA;TTTGCGTC;-!YRM1#MA0438.1;3;0.0187526;8.92622;1;5;TACGCCA;ATTTCCGT;-!CRZ1#MA0285.1;1;0.0190658;9.07532;1;7;TACGCCA;CTAAGCCAC;+
}}
}}

Latest revision as of 14:30, 7 September 2012

Full Name: TMCGYCR,motif946,CNhs13539,T:982.0(38.46%),B:21767.3(28.45%),P:1e-27

Motif matrix
POACGT
10.9820.98224.55955.486
2495.91484.1260.9820.982
30.982979.0540.9820.982
40.9820.982979.0540.982
50.982493.9460.982486.09
60.982979.0540.9820.982
7519.4780.982460.5580.982

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
TGA1A#MA0129.100.0008484340.4038550.476267TACGCCATACGTCA+
CST6#MA0286.110.001490980.7097080.476267TACGCCATTACGTCAT-
CHA4#MA0283.120.001500820.7143890.476266TACGCCATCTCCGCC-
YPR015C#MA0435.1100.004916712.3403517TACGCCATGTAAGGATTTACGTCTTCA-
CREB1#MA0018.200.009578084.5591717TACGCCAGACGTCACCAGG-
HLF#MA0043.130.009578084.5591717TACGCCAGGTTACGCAATT+
CREB1#MA0018.210.01081925.1499617TACGCCATGACGTCA-
bZIP910#MA0096.1-10.01095055.2124216TACGCCAACGTCAT-
PDR8#MA0354.130.01380926.5731915TACGCCAATCTCCGT-
YKL222C#MA0428.130.01414576.7333716TACGCCAATTTCCGTT-
btd#MA0443.100.0155297.391817TACGCCATCCGCCCCCT-
RPN4#MA0373.1-20.01715328.1649315TACGCCACGCCACC-
FHL1#MA0295.120.0176418.3971316TACGCCATTTGCGTC-
YRM1#MA0438.130.01875268.9262215TACGCCAATTTCCGT-
CRZ1#MA0285.110.01906589.0753217TACGCCACTAAGCCAC+
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