Personal tools

MCL coexpression mm9:1211: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=1.07317146816637,-0.137853516124103,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.137168963482413,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,0.247814221819822,-0.150552284593719,-0.156425520750125,-0.12289549256434,-0.130797952928162,-0.128272845562164,-0.156425520750125,-0.144319137238239,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.146884672339772,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.0911034543462994,-0.0963667332931158,-0.135515401323352,0.219384450285788,-0.156425520750125,-0.102420538898752,0.00749230092972648,0.270925658600831,0.624877894996276,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.120938466419926,-0.0710422565796317,-0.0350541953945373,0.735498241319609,0.690197564517443,0.621178645291127,-0.00117067034663007,0.0765314084464005,0.320936251166606,0.192951016355512,0.395115472822908,0.243263654810258,0.469837839406485,-0.115137904320755,-0.133738961309186,-0.120896096408795,0.210042261578915,0.177715066001086,-0.142087580783459,-0.150747046880084,-0.156425520750125,0.321529975738285,0.17582442138733,0.216875122767178,0.381764010858135,0.309858690534768,0.283705100397467,0.381805960093239,0.119440877471403,0.230135759446063,0.220138883295092,0.166519590060212,0.225001093518111,-0.0936736150247166,-0.0617512057011857,-0.0892355541488707,-0.156425520750125,-0.0920535575561298,-0.156425520750125,0.00427838605620362,-0.0540715312559786,0.11462777376859,0.382372312797811,0.32804391875885,0.418780343679538,0.820600735966792,0.234636013699604,0.214909595091609,0.270581790759231,0.503505997201868,0.494526919437254,0.476948032234903,0.176731742186372,-0.0348991048440749,0.175098296957714,0.165784452029868,0.204145678057259,0.10409913810325,0.121573646105588,0.255271704557949,0.206518983543602,0.224584050226579,-0.0418615469116976,-0.038473398575565,0.094678694200038,0.113473801812541,0.112609865446153,-0.0258653721105345,0.119388678262565,0.118284894873678,-0.102590734991742,-0.156425520750125,-0.156425520750125,-0.156425520750125,0.321632102126027,-0.0391420426182123,-0.141738362235685,-0.136538919802458,-0.156425520750125,0.150437818525037,-0.0141998478298803,-0.00354648919413694,0.129733298728609,-0.117065519305959,0.536853161969069,0.721930150189875,0.58335462725529,0.600652662850366,0.354778309448751,0.25091860585073,0.165583932926939,0.156938547208114,0.288658168535267,0.082059726876131,0.232017228276185,0.340889064237478,0.426631979913608,0.408997426217536,0.481618214745569,0.563510770529807,0.29673568981948,-0.156425520750125,-0.156425520750125,-0.156425520750125,0.317869560679733,0.37075117351249,0.358234116204261,0.450527380781696,0.381844910893028,0.333713112279562,0.396043131831544,0.336966209701327,0.460484872694734,0.539327162294756,0.561922734460741,0.626935744232737,0.58749652777311,0.587039304301134,0.577089603567009,-0.134644711521094,-0.115968491865344,-0.138712896797676,-0.127310704923655,0.0295039683575567,-0.00323545487018893,-0.0683279122956679,-0.112603879460053,-0.108681861570814,-0.0932057691208586,-0.156425520750125,-0.129301424008123,-0.107653428376904,-0.108844428703414,-0.0921059036807151,-0.156425520750125,-0.14428510979866,-0.122623941654668,0.409298695448098,0.329098951681772,0.497564762960287,0.471622467784537,0.454651018501655,0.513203482275969,0.453935617573043,0.589621729680638,0.531887446738825,0.515178934148513,-0.111433149767496,-0.0585114116113087,-0.124722375535196,-0.118673863097446,-0.156425520750125,-0.156425520750125,-0.0772038331100592,-0.00280365873451529,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.0902824971590545,-0.156425520750125,-0.117084505779738,-0.119472551145492,-0.0726147811096363,0.733139167648017,0.34346303343229,0.54525497378126,0.618826690517158,0.669060199958634,0.693071262949142,0.822375741830787,0.642888016651821,0.630950362740939,0.606042369007853,0.57482155777388,0.619064368583914,0.54662164950472,0.594147094813237,-0.156425520750125,-0.156425520750125,0.690951853110341,0.752113856101689,0.207379332625929,0.217449588654413,0.0199266145907906,-0.089165137658311,-0.122398787623829,-0.0848157938381055,-0.144321578956128,-0.143131182279898,-0.121082334748694,-0.102819321343105,-0.156425520750125,-0.12786902722213,-0.135759265030706,-0.139138600554484,0.400478411949945,0.353782064429544,0.260130128370611,-0.0261696484281232,0.0288083455081417,-0.0873537234754991,-0.110697172797294,-0.104409383077381,-0.108266520673138,-0.0992480133478512,-0.102053882244968,-0.117949553472562,-0.0662808193285817,-0.122348943712454,-0.156425520750125,-0.112456103623072,-0.0188139148124062,0.29857160625217,0.0678780666934684,0.171030785050507,0.191423266520483,0.172290449419065,0.165305955426919,0.288435490589388,0.359477946697271,0.532388497288186,0.00119213944319049,0.59485174601625,0.536320627324308,0.277235840890256,0.303218135940994,0.340499491894806,-0.108816392306405,0.228131759852896,-0.136851519217628,-0.0715137760616919,-0.105252264514047,-0.145718218498957,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.148298898433498,-0.156425520750125,0.32437907003864,0.0674813950541964,0.0555906567468013,0.10867566158246,0.112178749193663,0.164805653884017,0.185264519074921,0.177132456198387,0.162083910819612,-0.127001817291497,0.403494153055824,-0.156425520750125,-0.0369258274669136,-0.0609426646455734,-0.13437740450552,-0.0586286921918671,-0.075564556589578,-0.081573803268137,-0.121608699387543,-0.11296373868855,-0.156425520750125,-0.156425520750125,-0.108999001860023,0.0995465943111338,-0.0177039795771346,-0.120185530290838,-0.0861097037008854,-0.116175716833444,-0.11619587481244,-0.139332829703855,-0.116223413039189,-0.142755920254716,-0.156425520750125,-0.104345620921518,-0.124074780454733,-0.124744788746799,0.114535047351436,0.544235343438839,0.927299790351139,0.76463354615333,-0.112591545226907,-0.0678242695937571,-0.137061649190317,0.0628083990803712,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,0.640562175698317,0.569221410317517,0.357783358131693,0.313815089194937,0.333735933261532,0.30685508289875,0.260664195157127,0.290337792850309,0.22710270849654,0.281839086636937,0.221644196805326,0.309603135728284,0.307391005774235,0.27728440673714,0.238317338261804,0.254344783428721,0.271720993674107,0.242790562390502,0.22600068134236,0.30596685311656,0.258612992652046,0.285556722370364,0.221635248889756,0.228447658574359,0.270088892418755,0.285196594974771,0.251778662604923,0.244087246242125,0.283383202885031,0.241960868473217,0.235039105145223,0.156007233305135,0.31380480136776,0.237634956963993,0.354721502903814,0.389596644553807,0.219756059655736,0.266609839114786,0.256821185334402,0.0949971760109121,0.0413002586473444
|coexpression_dpi_cluster_scores_mean=1.07317146816637,-0.137853516124103,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.137168963482413,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,0.247814221819822,-0.150552284593719,-0.156425520750125,-0.12289549256434,-0.130797952928162,-0.128272845562164,-0.156425520750125,-0.144319137238239,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.146884672339772,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.0911034543462994,-0.0963667332931158,-0.135515401323352,0.219384450285788,-0.156425520750125,-0.102420538898752,0.00749230092972648,0.270925658600831,0.624877894996276,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.120938466419926,-0.0710422565796317,-0.0350541953945373,0.735498241319609,0.690197564517443,0.621178645291127,-0.00117067034663007,0.0765314084464005,0.320936251166606,0.192951016355512,0.395115472822908,0.243263654810258,0.469837839406485,-0.115137904320755,-0.133738961309186,-0.120896096408795,0.210042261578915,0.177715066001086,-0.142087580783459,-0.150747046880084,-0.156425520750125,0.321529975738285,0.17582442138733,0.216875122767178,0.381764010858135,0.309858690534768,0.283705100397467,0.381805960093239,0.119440877471403,0.230135759446063,0.220138883295092,0.166519590060212,0.225001093518111,-0.0936736150247166,-0.0617512057011857,-0.0892355541488707,-0.156425520750125,-0.0920535575561298,-0.156425520750125,0.00427838605620362,-0.0540715312559786,0.11462777376859,0.382372312797811,0.32804391875885,0.418780343679538,0.820600735966792,0.234636013699604,0.214909595091609,0.270581790759231,0.503505997201868,0.494526919437254,0.476948032234903,0.176731742186372,-0.0348991048440749,0.175098296957714,0.165784452029868,0.204145678057259,0.10409913810325,0.121573646105588,0.255271704557949,0.206518983543602,0.224584050226579,-0.0418615469116976,-0.038473398575565,0.094678694200038,0.113473801812541,0.112609865446153,-0.0258653721105345,0.119388678262565,0.118284894873678,-0.102590734991742,-0.156425520750125,-0.156425520750125,-0.156425520750125,0.321632102126027,-0.0391420426182123,-0.141738362235685,-0.136538919802458,-0.156425520750125,0.150437818525037,-0.0141998478298803,-0.00354648919413694,0.129733298728609,-0.117065519305959,0.536853161969069,0.721930150189875,0.58335462725529,0.600652662850366,0.354778309448751,0.25091860585073,0.165583932926939,0.156938547208114,0.288658168535267,0.082059726876131,0.232017228276185,0.340889064237478,0.426631979913608,0.408997426217536,0.481618214745569,0.563510770529807,0.29673568981948,-0.156425520750125,-0.156425520750125,-0.156425520750125,0.317869560679733,0.37075117351249,0.358234116204261,0.450527380781696,0.381844910893028,0.333713112279562,0.396043131831544,0.336966209701327,0.460484872694734,0.539327162294756,0.561922734460741,0.626935744232737,0.58749652777311,0.587039304301134,0.577089603567009,-0.134644711521094,-0.115968491865344,-0.138712896797676,-0.127310704923655,0.0295039683575567,-0.00323545487018893,-0.0683279122956679,-0.112603879460053,-0.108681861570814,-0.0932057691208586,-0.156425520750125,-0.129301424008123,-0.107653428376904,-0.108844428703414,-0.0921059036807151,-0.156425520750125,-0.14428510979866,-0.122623941654668,0.409298695448098,0.329098951681772,0.497564762960287,0.471622467784537,0.454651018501655,0.513203482275969,0.453935617573043,0.589621729680638,0.531887446738825,0.515178934148513,-0.111433149767496,-0.0585114116113087,-0.124722375535196,-0.118673863097446,-0.156425520750125,-0.156425520750125,-0.0772038331100592,-0.00280365873451529,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.0902824971590545,-0.156425520750125,-0.117084505779738,-0.119472551145492,-0.0726147811096363,0.733139167648017,0.34346303343229,0.54525497378126,0.618826690517158,0.669060199958634,0.693071262949142,0.822375741830787,0.642888016651821,0.630950362740939,0.606042369007853,0.57482155777388,0.619064368583914,0.54662164950472,0.594147094813237,-0.156425520750125,-0.156425520750125,0.690951853110341,0.752113856101689,0.207379332625929,0.217449588654413,0.0199266145907906,-0.089165137658311,-0.122398787623829,-0.0848157938381055,-0.144321578956128,-0.143131182279898,-0.121082334748694,-0.102819321343105,-0.156425520750125,-0.12786902722213,-0.135759265030706,-0.139138600554484,0.400478411949945,0.353782064429544,0.260130128370611,-0.0261696484281232,0.0288083455081417,-0.0873537234754991,-0.110697172797294,-0.104409383077381,-0.108266520673138,-0.0992480133478512,-0.102053882244968,-0.117949553472562,-0.0662808193285817,-0.122348943712454,-0.156425520750125,-0.112456103623072,-0.0188139148124062,0.29857160625217,0.0678780666934684,0.171030785050507,0.191423266520483,0.172290449419065,0.165305955426919,0.288435490589388,0.359477946697271,0.532388497288186,0.00119213944319049,0.59485174601625,0.536320627324308,0.277235840890256,0.303218135940994,0.340499491894806,-0.108816392306405,0.228131759852896,-0.136851519217628,-0.0715137760616919,-0.105252264514047,-0.145718218498957,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.148298898433498,-0.156425520750125,0.32437907003864,0.0674813950541964,0.0555906567468013,0.10867566158246,0.112178749193663,0.164805653884017,0.185264519074921,0.177132456198387,0.162083910819612,-0.127001817291497,0.403494153055824,-0.156425520750125,-0.0369258274669136,-0.0609426646455734,-0.13437740450552,-0.0586286921918671,-0.075564556589578,-0.081573803268137,-0.121608699387543,-0.11296373868855,-0.156425520750125,-0.156425520750125,-0.108999001860023,0.0995465943111338,-0.0177039795771346,-0.120185530290838,-0.0861097037008854,-0.116175716833444,-0.11619587481244,-0.139332829703855,-0.116223413039189,-0.142755920254716,-0.156425520750125,-0.104345620921518,-0.124074780454733,-0.124744788746799,0.114535047351436,0.544235343438839,0.927299790351139,0.76463354615333,-0.112591545226907,-0.0678242695937571,-0.137061649190317,0.0628083990803712,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,-0.156425520750125,0.640562175698317,0.569221410317517,0.357783358131693,0.313815089194937,0.333735933261532,0.30685508289875,0.260664195157127,0.290337792850309,0.22710270849654,0.281839086636937,0.221644196805326,0.309603135728284,0.307391005774235,0.27728440673714,0.238317338261804,0.254344783428721,0.271720993674107,0.242790562390502,0.22600068134236,0.30596685311656,0.258612992652046,0.285556722370364,0.221635248889756,0.228447658574359,0.270088892418755,0.285196594974771,0.251778662604923,0.244087246242125,0.283383202885031,0.241960868473217,0.235039105145223,0.156007233305135,0.31380480136776,0.237634956963993,0.354721502903814,0.389596644553807,0.219756059655736,0.266609839114786,0.256821185334402,0.0949971760109121,0.0413002586473444
|coexpression_dpi_cluster_scores_median=1.08099679410797,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,0.215138823020032,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.103745996070138,-0.106933970181961,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.0880872011895838,-0.0781213336802158,-0.111524892460631,0.215608090251014,-0.111524892460631,-0.111524892460631,0,0.293283285162355,0.63586788897569,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.0880872011895838,-0.0345830842961519,-0.0317017435824471,0.840517135128927,0.731140377413308,0.831976340137376,-0.0317017435824471,0.0828572449011806,0.423762656780655,0.2105184014675,0.407656941447034,0.204150046663021,0.455445934269721,-0.0686779373777566,-0.111524892460631,-0.0880872011895838,0.129592089703795,0.109264352471454,-0.111524892460631,-0.111524892460631,-0.111524892460631,0.290757134952726,0.109139910023015,0.260376902188741,0.334696568077969,0.346907814109262,0.278317143742041,0.277009316909363,0.10580581074941,0.281702180857745,0.144717939941227,0.212204249634013,0.23430240694053,-0.0880872011895838,-0.0542380841845952,-0.0880872011895838,-0.111524892460631,-0.0880872011895838,-0.111524892460631,0,-0.0261520462462521,0.0758096982973783,0.320530493736493,0.273438550818601,0.353874534948963,0.837241600987447,0.247031384023817,0,-0.0317017435824471,0.417571842238185,0.510171945278579,0.517556814731236,0.164452159062046,-0.0317017435824471,0.184292718981054,0.159642270039802,0.193717759254997,0.0901223798974778,0.119381702307607,0.226111459246044,0.145160821977613,0.201563935448547,-0.0327197284966486,-0.0317017435824471,0.0900332602279696,0.132680867334606,0.171689969376673,-0.0880872011895838,0.0326817692279867,0.0708526508519903,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,0.259194609980255,-0.0317017435824471,-0.111524892460631,-0.0880872011895838,-0.111524892460631,0.047547852947031,-0.0227909110500739,0.010416540154258,0.1138492518802,-0.111524892460631,0.53065394070673,0.771349136997613,0.58201327540386,0.591459222189306,0.284151373853566,0.193944169304889,0.198142073749049,0.106539959006671,0.249469886918853,0.0675937009875001,0.288641437672178,0.333794268626754,0.473884454326863,0.466021189904569,0.536276206631596,0.485412110618279,0.250782611753474,-0.111524892460631,-0.111524892460631,-0.111524892460631,0.277619992098768,0.310355713554745,0.278824523977366,0.384116924274519,0.403315488617606,0.293765299350292,0.334990200389588,0.256433944073506,0.482014228916913,0.560834282059214,0.590963629025079,0.603788526658342,0.686169391193733,0.588287956365278,0.637202377300529,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.0880872011895838,0.0427701734742228,0,-0.0514905409071238,-0.111524892460631,-0.111524892460631,-0.0880872011895838,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.0880872011895838,-0.111524892460631,-0.111524892460631,-0.111524892460631,0.373813171089376,0.330797591342164,0.517863546921414,0.414523732358603,0.434021706590108,0.524000211837689,0.430261159964141,0.548606439434092,0.505472779611144,0.523097321711889,-0.101812751715382,-0.0445116835424958,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.0880872011895838,-0.00171149946586302,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.0880872011895838,-0.111524892460631,-0.0956373994637712,-0.111524892460631,-0.0317017435824471,0.634401468290437,0.36919289411695,0.649529104552916,0.776814746826289,0.678280344240031,0.811214851222145,0.765287813523077,0.635609790478873,0.679473338747371,0.523214240826657,0.498731248989519,0.590444149166397,0.455278440913783,0.576199905259341,-0.111524892460631,-0.111524892460631,0.578706258217318,0.702638429049728,0.120936080462619,0.265253819264334,0,-0.0317017435824471,-0.0880872011895838,-0.0533686523056192,-0.111524892460631,-0.111524892460631,-0.106087524311351,-0.0880872011895838,-0.111524892460631,-0.104107241801722,-0.111524892460631,-0.111524892460631,0.450657405980098,0.296539434854983,0.334352651738879,-0.0317017435824471,0,-0.0880872011895838,-0.0880872011895838,-0.0364873104848972,-0.0810714832673707,-0.0823972322377491,-0.0880872011895838,-0.111524892460631,-0.0880872011895838,-0.0741744638151592,-0.111524892460631,-0.0880872011895838,0,0.275951917955671,0.0682264809762993,0.123231418925813,0.15356289001541,0.140617888241771,0.123557017950668,0.281804600099495,0.438549278371851,0.559397392795585,-0.000138564636739613,0.492046695475063,0.466211824280203,0.177763426460241,0.234576517650013,0.27611231392149,-0.0880872011895838,0.136990127740213,-0.111524892460631,-0.0317017435824471,-0.0377352550007641,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,0.393595966630449,0.031279555515148,0.0486791991284866,0.10147501293431,0.120028569188857,0.130733807684748,0.195385986838128,0.202366381785511,0.151144102650431,-0.111524892460631,0.34545084146065,-0.111524892460631,-0.0325091014789045,0,-0.111524892460631,-0.0243086636410805,-0.0317017435824471,-0.105790292625584,-0.0880872011895838,-0.0880872011895838,-0.111524892460631,-0.111524892460631,-0.0880872011895838,0.118246279706921,0.0150702846409397,-0.111524892460631,-0.0880872011895838,-0.100957819108801,-0.0622310883239293,-0.111524892460631,-0.0697508076618057,-0.0880872011895838,-0.111524892460631,-0.111524892460631,-0.083312383703101,-0.111524892460631,0.031916209609242,0.524941870449682,0.90780863758989,0.742951615462861,-0.111524892460631,-0.0317017435824471,-0.111524892460631,0.0526487065283563,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,-0.111524892460631,0.710781208480408,0.610034991952027,0.372604508971757,0.315131067765666,0.360518831355914,0.24772314783507,0.19016616235965,0.229356477647182,0.181341781574333,0.330779317536441,0.178101321237085,0.319458628848696,0.252271502083426,0.218209650573457,0.2206527870685,0.273881358352951,0.290421877877173,0.245854609793239,0.311449438495334,0.307579987894927,0.263494026247861,0.232971531330564,0.20278062500201,0.157166310227119,0.219785036720782,0.266266062213982,0.280014237518545,0.276529178643469,0.235265486622829,0.326803611095607,0.251632521657887,0.0901526284349255,0.333010440222859,0.238625152236088,0.325616517635275,0.327598349163337,0.175319088252468,0.271601530118086,0.220454789512988,0.0548685689149552,0.0358818226615607
|gostat_on_MCL_coexpression=
|gostat_on_MCL_coexpression=
}}
}}

Revision as of 12:53, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr8:94324180..94324193,-p@chr8:94324180..94324193
-
Mm9::chr8:94325273..94325288,-p5@Irx3
Mm9::chr8:94325321..94325366,-p1@Irx3
Mm9::chr8:94325446..94325459,-p8@Irx3
Mm9::chr8:94325486..94325510,-p4@Irx3
Mm9::chr8:94325814..94325839,-p2@Irx3
Mm9::chr8:94325847..94325869,-p3@Irx3


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:1211&oldid=2150497"