Personal tools

MCL coexpression mm9:2482: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=0.352611384011649,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.519142426185737,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.520089990456497,-0.535991913794985,-0.535991913794985,-0.0358303426322019,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.483944426659765,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.525507919852775,-0.535991913794985,-0.342071574260159,0.137835368661829,0.0670982785121446,0.125315061313992,0.166415090764811,0.252160287889996,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.000258337081428871,-0.028764522377609,-0.0714140044958611,0.46869003673201,0.464519795416498,0.591362094603324,0.0171620077380764,-0.2001349637775,-0.535991913794985,-0.461340513130714,-0.535991913794985,-0.076791124511227,0.122164233674964,0.394350497881626,0.448786121697917,0.420531241215736,0.4364573774362,0.365494411558449,0.242032385438136,0.124879547909494,0.234872669865309,0.230611936689605,0.377899912868031,0.299089825636165,0.611585056692957,0.453181831984614,0.514018754497716,0.0608369917737051,0.150185012524993,0.161984192007742,0.515721210323673,0.497935008656685,0.546776960349746,-0.0767805345607907,0.110055082300633,-0.222265068128977,-0.244410670603614,-0.337034057751382,-0.152153245313942,0.199744780775392,-0.0231828722897268,-0.1246363796781,-0.535991913794985,-0.535991913794985,-0.535991913794985,0.18094301094266,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.330935980036302,-0.333458710967278,-0.49156996092199,-0.0231369086059521,-0.163865153613228,-0.226674707101261,0.100340643651194,0.00650866684481565,0.100960502097573,-0.0464358505539592,0.154570851918839,-0.0489535535902367,-0.119358954090014,-0.248696003236453,-0.467186509193158,0.157977818505211,-0.12064520611424,-0.0807941281365881,-0.307511653675701,-0.256008907381184,-0.210320942055331,-0.491181969522285,-0.535991913794985,-0.535991913794985,-0.535991913794985,0.282779125576755,0.212261644587484,0.338187166955277,0.428090782601562,0.473911956862126,0.284189627036085,0.387306744181715,0.519352246908936,-0.201744558069172,-0.380992588674425,-0.151789282337421,0.37791750248858,0.149100636448845,0.296867568103952,0.21085946420918,0.281377935766589,0.250356155488504,0.213487893748322,0.149139863538206,0.304808368263711,0.392598674032284,0.509881311462698,0.343936911749424,0.48307246767174,0.306322788592016,0.364203381552556,0.423961872670499,-0.535991913794985,-0.535991913794985,-0.535991913794985,0.048497544167593,0.0504986241003152,0.0781800606958136,-0.0418059918635802,-0.172324394350602,-0.159692925720859,-0.183307255779082,-0.208182443626164,-0.150210747124633,-0.297116277714242,-0.179167019637024,-0.24417685117472,-0.336506543988097,-0.277974406817252,-0.305701987264004,0.361606422651173,0.291308030424222,-0.535991913794985,-0.485040986098661,0.280449211061743,0.302222704913636,0.298332590349307,0.130973461266994,0.0611522743472811,-0.04922928375741,-0.421372382056434,-0.15670415292754,-0.159736731800854,-0.188584759996457,-0.269279156004373,-0.285052171407193,-0.436732822152562,-0.334212289846428,0.0591954309486726,0.263132521314547,0.321956603436731,0.254108776796242,0.293855492880701,0.328423671663651,0.063632113927992,-0.28929196309878,-0.275227674949848,-0.323530703006658,0.0842759634586157,-0.0398183689624538,0.0493699338208239,-0.11762470817232,0.0737816409450123,0.222596718992107,0.223128188214658,0.214343646762095,0.110861548445189,0.154775340045534,0.22640296664209,0.234343847026294,0.284215249779724,0.229973115439418,0.0236404063142704,-0.0386224322325633,-0.40396779252314,0.273518504198516,-0.00455018675745782,-0.0861530960478759,-0.18666247351224,-0.237098220433989,-0.252831494568882,-0.219346466408717,-0.268341346328745,-0.358534640661182,-0.361380932437664,-0.393143861399741,-0.45111859880387,-0.444167722209311,-0.535991913794985,-0.535991913794985,-0.461632300039177,-0.428786250874261,0.190492700394586,0.156885975864991,-0.535991913794985,-0.0969690835472163,0.161570780839595,0.236920942540591,0.241144195554422,0.219653781452316,0.338777771169134,0.43885192114597,0.213716432969902,0.18998354566745,0.186920055884924,0.512600926115763,-0.216814511104541,0.233333027086789,0.399311868863959,0.127826218295322,-0.260831450252625,0.132389172724853,0.100670112216533,0.0321904210387828,0.0391570679635111,0.127595680315968,0.00279355203552232,0.0483534714226196,0.0358213967595368,-0.191272152253218,-0.457831968006718,-0.535991913794985,0.172096362120677,0.349302045879576,0.304475016040738,0.405162521110341,0.464664427093051,0.39768418187309,0.408586443315398,0.338472884774627,-0.264336230376628,-0.348292950679076,-0.348218038907977,-0.212384540809105,0.139273911769316,0.0989619361284887,0.0268022284658622,-0.123934559394204,-0.398430778558771,0.192599692950425,-0.504074679454091,0.113301276962354,-0.0190514339293933,-0.463938425312068,-0.481929859439957,-0.431810865314221,-0.535991913794985,-0.521770324740887,-0.535991913794985,-0.463223517585848,0.190158360085934,0.19110455723668,0.16521193803551,0.117601752788128,0.00500351104107535,-0.0023103106099812,-0.0282617376686421,-0.336002275099947,-0.41007842385207,-0.334056219306243,-0.356954608338804,0.131764996232252,0.061664573962707,0.310529512716956,0.230530468312294,0.282159541263959,0.328301457124883,0.132945005440453,0.140777060009031,-0.258043720721005,-0.311900903374353,-0.403269757595583,0.287900643510851,0.139414832515771,-0.0885861599326953,-0.106943445056848,-0.227901118173964,-0.271544100244594,-0.336770479865611,-0.325933500802289,-0.366692049728936,-0.414340500962503,-0.380764671417301,-0.468269440046419,-0.36488347870303,-0.147477699919136,-0.535991913794985,-0.535991913794985,-0.519141929331987,0.0233819155925627,-0.371936442642266,-0.0741603828512487,-0.26771563479002,-0.300041698610945,0.756884843434139,0.721662295399888,0.811161003438688,0.877420309022752,0.687606794953345,0.698347120692547,0.666616848012362,0.70440408549368,0.63508655733288,0.695770617891596,0.176140101456755,0.439744745798539,0.354521015409601,0.361726330689679,0.254931512862672,0.126184282454696,0.215105146582372,0.258403819883594,0.0949498067516825,0.294055109693217,0.221823184670069,0.246370605157182,0.315288551054621,0.241609277212432,0.275483922784774,0.267418727825894,0.298026531882096,0.308765939208376,0.23828229247853,0.283550125945297,0.264968843141456,0.295830579418307,0.212574379338906,0.243698077652965,0.268878489881951,0.289401392840133,0.257959386495467,0.177461469524611,0.286894791299056,0.350257838139678,0.279077935117399,0.329827113187962,0.293343609816664,0.288056605364583,0.311690586470447,0.411174804640625,0.138694449398199,0.228517960919955,0.184020141442057,0.10698919862255,0.0787206082659982
|coexpression_dpi_cluster_scores_mean=0.352611384011649,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.519142426185737,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.520089990456497,-0.535991913794985,-0.535991913794985,-0.0358303426322019,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.483944426659765,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.525507919852775,-0.535991913794985,-0.342071574260159,0.137835368661829,0.0670982785121446,0.125315061313992,0.166415090764811,0.252160287889996,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.000258337081428871,-0.028764522377609,-0.0714140044958611,0.46869003673201,0.464519795416498,0.591362094603324,0.0171620077380764,-0.2001349637775,-0.535991913794985,-0.461340513130714,-0.535991913794985,-0.076791124511227,0.122164233674964,0.394350497881626,0.448786121697917,0.420531241215736,0.4364573774362,0.365494411558449,0.242032385438136,0.124879547909494,0.234872669865309,0.230611936689605,0.377899912868031,0.299089825636165,0.611585056692957,0.453181831984614,0.514018754497716,0.0608369917737051,0.150185012524993,0.161984192007742,0.515721210323673,0.497935008656685,0.546776960349746,-0.0767805345607907,0.110055082300633,-0.222265068128977,-0.244410670603614,-0.337034057751382,-0.152153245313942,0.199744780775392,-0.0231828722897268,-0.1246363796781,-0.535991913794985,-0.535991913794985,-0.535991913794985,0.18094301094266,-0.535991913794985,-0.535991913794985,-0.535991913794985,-0.330935980036302,-0.333458710967278,-0.49156996092199,-0.0231369086059521,-0.163865153613228,-0.226674707101261,0.100340643651194,0.00650866684481565,0.100960502097573,-0.0464358505539592,0.154570851918839,-0.0489535535902367,-0.119358954090014,-0.248696003236453,-0.467186509193158,0.157977818505211,-0.12064520611424,-0.0807941281365881,-0.307511653675701,-0.256008907381184,-0.210320942055331,-0.491181969522285,-0.535991913794985,-0.535991913794985,-0.535991913794985,0.282779125576755,0.212261644587484,0.338187166955277,0.428090782601562,0.473911956862126,0.284189627036085,0.387306744181715,0.519352246908936,-0.201744558069172,-0.380992588674425,-0.151789282337421,0.37791750248858,0.149100636448845,0.296867568103952,0.21085946420918,0.281377935766589,0.250356155488504,0.213487893748322,0.149139863538206,0.304808368263711,0.392598674032284,0.509881311462698,0.343936911749424,0.48307246767174,0.306322788592016,0.364203381552556,0.423961872670499,-0.535991913794985,-0.535991913794985,-0.535991913794985,0.048497544167593,0.0504986241003152,0.0781800606958136,-0.0418059918635802,-0.172324394350602,-0.159692925720859,-0.183307255779082,-0.208182443626164,-0.150210747124633,-0.297116277714242,-0.179167019637024,-0.24417685117472,-0.336506543988097,-0.277974406817252,-0.305701987264004,0.361606422651173,0.291308030424222,-0.535991913794985,-0.485040986098661,0.280449211061743,0.302222704913636,0.298332590349307,0.130973461266994,0.0611522743472811,-0.04922928375741,-0.421372382056434,-0.15670415292754,-0.159736731800854,-0.188584759996457,-0.269279156004373,-0.285052171407193,-0.436732822152562,-0.334212289846428,0.0591954309486726,0.263132521314547,0.321956603436731,0.254108776796242,0.293855492880701,0.328423671663651,0.063632113927992,-0.28929196309878,-0.275227674949848,-0.323530703006658,0.0842759634586157,-0.0398183689624538,0.0493699338208239,-0.11762470817232,0.0737816409450123,0.222596718992107,0.223128188214658,0.214343646762095,0.110861548445189,0.154775340045534,0.22640296664209,0.234343847026294,0.284215249779724,0.229973115439418,0.0236404063142704,-0.0386224322325633,-0.40396779252314,0.273518504198516,-0.00455018675745782,-0.0861530960478759,-0.18666247351224,-0.237098220433989,-0.252831494568882,-0.219346466408717,-0.268341346328745,-0.358534640661182,-0.361380932437664,-0.393143861399741,-0.45111859880387,-0.444167722209311,-0.535991913794985,-0.535991913794985,-0.461632300039177,-0.428786250874261,0.190492700394586,0.156885975864991,-0.535991913794985,-0.0969690835472163,0.161570780839595,0.236920942540591,0.241144195554422,0.219653781452316,0.338777771169134,0.43885192114597,0.213716432969902,0.18998354566745,0.186920055884924,0.512600926115763,-0.216814511104541,0.233333027086789,0.399311868863959,0.127826218295322,-0.260831450252625,0.132389172724853,0.100670112216533,0.0321904210387828,0.0391570679635111,0.127595680315968,0.00279355203552232,0.0483534714226196,0.0358213967595368,-0.191272152253218,-0.457831968006718,-0.535991913794985,0.172096362120677,0.349302045879576,0.304475016040738,0.405162521110341,0.464664427093051,0.39768418187309,0.408586443315398,0.338472884774627,-0.264336230376628,-0.348292950679076,-0.348218038907977,-0.212384540809105,0.139273911769316,0.0989619361284887,0.0268022284658622,-0.123934559394204,-0.398430778558771,0.192599692950425,-0.504074679454091,0.113301276962354,-0.0190514339293933,-0.463938425312068,-0.481929859439957,-0.431810865314221,-0.535991913794985,-0.521770324740887,-0.535991913794985,-0.463223517585848,0.190158360085934,0.19110455723668,0.16521193803551,0.117601752788128,0.00500351104107535,-0.0023103106099812,-0.0282617376686421,-0.336002275099947,-0.41007842385207,-0.334056219306243,-0.356954608338804,0.131764996232252,0.061664573962707,0.310529512716956,0.230530468312294,0.282159541263959,0.328301457124883,0.132945005440453,0.140777060009031,-0.258043720721005,-0.311900903374353,-0.403269757595583,0.287900643510851,0.139414832515771,-0.0885861599326953,-0.106943445056848,-0.227901118173964,-0.271544100244594,-0.336770479865611,-0.325933500802289,-0.366692049728936,-0.414340500962503,-0.380764671417301,-0.468269440046419,-0.36488347870303,-0.147477699919136,-0.535991913794985,-0.535991913794985,-0.519141929331987,0.0233819155925627,-0.371936442642266,-0.0741603828512487,-0.26771563479002,-0.300041698610945,0.756884843434139,0.721662295399888,0.811161003438688,0.877420309022752,0.687606794953345,0.698347120692547,0.666616848012362,0.70440408549368,0.63508655733288,0.695770617891596,0.176140101456755,0.439744745798539,0.354521015409601,0.361726330689679,0.254931512862672,0.126184282454696,0.215105146582372,0.258403819883594,0.0949498067516825,0.294055109693217,0.221823184670069,0.246370605157182,0.315288551054621,0.241609277212432,0.275483922784774,0.267418727825894,0.298026531882096,0.308765939208376,0.23828229247853,0.283550125945297,0.264968843141456,0.295830579418307,0.212574379338906,0.243698077652965,0.268878489881951,0.289401392840133,0.257959386495467,0.177461469524611,0.286894791299056,0.350257838139678,0.279077935117399,0.329827113187962,0.293343609816664,0.288056605364583,0.311690586470447,0.411174804640625,0.138694449398199,0.228517960919955,0.184020141442057,0.10698919862255,0.0787206082659982
|coexpression_dpi_cluster_scores_median=0.34849822587829,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.417856084720825,-0.449659931397802,-0.449659931397802,-0.0450378617015939,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,0.129517967517557,0.0403887323789593,0.131046353711596,0.201291530674918,0.379650441024896,-0.449659931397802,-0.449659931397802,-0.449659931397802,0.0167106040742538,-0.0149317660001238,-0.0548550317333411,0.506326510171255,0.488894675557794,0.646144618216177,0.0207073909976996,-0.152838973260613,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.103784481596134,0.145597317425026,0.356492862771273,0.415601723608993,0.367608902560311,0.387431706092777,0.342364975518227,0.196718538152975,0.117176651834453,0.185551293722238,0.233291791313223,0.284017959503595,0.213903076951382,0.599504551353651,0.466322924521077,0.509295782160201,0.0887707883513918,0.0837333567282654,0.0590602996270208,0.511272051564448,0.50209756393584,0.530747104877203,-0.0143336370715628,0.122224056456216,-0.191697545132937,-0.173967362149913,-0.33700899580831,-0.172287339601839,0.230861908460464,0.0253094547514584,-0.118903299923556,-0.449659931397802,-0.449659931397802,-0.449659931397802,0.197860538147065,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.262866929673699,-0.351584147593421,-0.449659931397802,-0.0595069502961346,-0.091543795024144,-0.247234677096413,0.146435316491132,0.0025740764159128,0.099344678906004,-0.0227630540397154,0.151329990131925,-0.0638830973494128,-0.131684396249765,-0.271521055416854,-0.449659931397802,0.133899053201013,-0.12657134812909,-0.0319101166248398,-0.290988837434707,-0.140378924643298,-0.188203676252905,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,0.205876486043632,0.120900975715774,0.319650630395755,0.388161621939825,0.45334762152736,0.20158961220972,0.305488828758773,0.515867542861534,-0.208998017061331,-0.360827410042668,-0.0934060475503185,0.362637237001486,0.150451827253495,0.311163731683723,0.227772112058497,0.315054710930374,0.258855725715278,0.211839198107698,0.144633856750311,0.275545795616226,0.347619766055038,0.49983569845428,0.383347161198138,0.513236071952492,0.331890808379613,0.36010501949662,0.421841935079576,-0.449659931397802,-0.449659931397802,-0.449659931397802,0.0518280770494179,0.0697127289379609,0.0720505651598431,-0.00937878283852911,-0.181254428027061,-0.136455613832524,-0.146519590542451,-0.213318742064163,-0.12972702974174,-0.329450307373027,-0.167681244999489,-0.232381733622577,-0.270702684736223,-0.269689134178548,-0.34639930255536,0.321349983260754,0.282178585156453,-0.449659931397802,-0.398709003701478,0.248683559636934,0.269761963825331,0.28681246446391,0.153157884798569,0.0253826780680084,-0.0478025169069266,-0.365333263149201,-0.194143430176394,-0.184493453718826,-0.207037975611995,-0.286246901274543,-0.310418100307454,-0.371646558920443,-0.308514677753187,0.0515455167717933,0.273646333129979,0.326010598628459,0.254363800522142,0.266580153351404,0.354379394103321,0.0429676677642249,-0.255756314282365,-0.260027636879242,-0.320040164169836,0.101061950178567,-0.0604401563118045,0.0710361298690859,-0.107631481125494,0.0794890594348202,0.224688141286944,0.230529828558643,0.220138539895097,0.196188424511841,0.235265985945084,0.232836420841943,0.209736213819711,0.284594644411598,0.268361966814375,0.0681157886524433,0.004824296759494,-0.412845988002275,0.279795453133343,-0.0049016779659621,-0.0816719558200143,-0.165341170179086,-0.249888487899473,-0.248081917454688,-0.2243151675451,-0.237328320590629,-0.362779014580646,-0.332642291709362,-0.329884218327102,-0.449659931397802,-0.394483257178306,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,0.0867471040511783,0.0560506684074277,-0.449659931397802,-0.0689441031441096,0.139415534760653,0.247681964078004,0.256928701608453,0.206590644996094,0.368531819456896,0.410357814642421,0.33455708699317,0.217581829723453,0.207435679697762,0.490420517016838,-0.248494233914145,0.225021578796214,0.473550826418694,0.141441656661098,-0.15275050559744,0.137744709358782,0.0955447628825893,0.0180690797357709,0.053326956090112,0.126545996101918,-0.0253249457527824,0.0325241439922407,0.0466002095071436,-0.158738501556306,-0.449659931397802,-0.449659931397802,0.196645154903997,0.405643919924583,0.324996486559787,0.367856997303722,0.506788598712004,0.41712708871305,0.41506425858656,0.405416597351625,-0.252629158970586,-0.331234937255987,-0.327045438133434,-0.193054536449066,0.170628513695413,0.106331948940542,0.0249738966733788,-0.192533982607195,-0.394115948213462,0.159961549199992,-0.449659931397802,0.166962228736534,-0.0211788490204778,-0.449659931397802,-0.369357649986352,-0.32311051082187,-0.449659931397802,-0.449659931397802,-0.449659931397802,-0.449659931397802,0.213991216718052,0.189055837915807,0.159892481220776,0.125500500645803,0.0256750166604382,-0.0221989851879727,-0.0529337268082198,-0.358237008281363,-0.378333054102231,-0.290988837434707,-0.255508456412863,0.13396165102916,0.0633049264160582,0.321731310824892,0.235477069770389,0.276160054565116,0.323647034677886,0.159677760034232,0.133942712117653,-0.2843084823693,-0.295910565941707,-0.390030151801749,0.314102309392267,0.123139367307436,-0.0819934592003422,-0.0968058726028524,-0.146921962762624,-0.262221817726522,-0.313818010508147,-0.320975774910694,-0.31211659017216,-0.334889349785968,-0.34326825876588,-0.449659931397802,-0.360388967060031,-0.143305557796928,-0.449659931397802,-0.449659931397802,-0.415959962471806,0.0111684132927265,-0.412309757199503,-0.112562369629247,-0.286617657200735,-0.290988837434707,0.758110009918352,0.72396004102807,0.83186661681881,0.875090107236633,0.631838615516759,0.682944252671561,0.638392234513866,0.684882104888347,0.578036385914457,0.668392515959441,0.177993800084805,0.47257557842171,0.323103947780743,0.339409779360698,0.232496983135208,0.169154492572534,0.229133589019916,0.269692694929656,0.156190809921452,0.316671140365524,0.223889103861215,0.26639297147273,0.318326618729332,0.220560121614093,0.269851918366569,0.344201963599182,0.303153833985255,0.304220894200725,0.273871005639243,0.321367649753574,0.255039870855322,0.281956983028431,0.228564263072484,0.266074826942985,0.288198264337251,0.301329119895822,0.258634787099709,0.218853706762157,0.285737989787129,0.33296577161313,0.285832162711243,0.331649515022519,0.276190722798932,0.281806516187951,0.347903300451873,0.410954752372714,0.117173294915324,0.26089820350642,0.193854743865125,0.113174244204132,0.0853578079049139
|gostat_on_MCL_coexpression=
|gostat_on_MCL_coexpression=
}}
}}

Revision as of 13:13, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr8:49640554..49640598,-p1@Odz3
Mm9::chr8:49640611..49640622,-p5@Odz3
Mm9::chr8:49640624..49640657,-p2@Odz3
Mm9::chr8:49641251..49641335,-p3@Odz3


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:2482&oldid=2151768"