Personal tools

User:Hisa: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 17: Line 17:




== GOStat results on Coexpression cluster  ==
== Enrichment analysis: top 100 MCL coexpression mm9 enriched with this ontology term v019 var. ==
{{#info:The results for GOStat analysis on co-expressed clusters("All" category)<br>Analyst: Erik Arner}}
{{#info:TOP 100 FANTOM5 Cage Peaks enriched with {{{id}}} ({{{name}}}), sorted by p-values <br>Analyst: Hideya Kawaji}}
 
{{#ask:[[MCL_coexpression_mm9_ontology_enrichment_uberon_id::UBERON:0002048]]
<table class="wikitable mw-collapsible" style="float:left;"><tr><th>GO ID</th><th>GO name</th><th>FDR corrected p-value</th></tr>
|?MCL_coexpression_mm9_ontology_enrichment_uberon_p-value|format=ttable|sort=MCL_coexpression_mm9_ontology_enrichment_uberon_p-value|order=asc|limit=100|searchlabel=}}
<tr>
{{#arraymap:GO:0007286;spermatid development;1.65326619879562e-06;56223,110147,19119,83984,54137,22210,237336,18472,75533,319448,70069,19118,60534,77963,53422,74360,58864,21744,30959!GO:0046930;pore complex;1.6591932181841e-06;75471,71844,75751,110382,16650,74204,65246,72787,230673,227699,107939,56488,69482,59015,69379,18226,53319,66011,231042!GO:0044453;nuclear membrane part;2.24654749624857e-06;75471,71844,75751,16650,74204,65246,16907,72787,230673,227699,107939,56488,69482,106582,59015,18226,53319,66011,231042!GO:0005930;axoneme;3.99420143678076e-06;56087,77945,18285,330355,66722,69287,75563,432611,110083,13417,71877,110084,252868
|!|$
|<td>{{#explode:$|;|0}}</td><td>{{#explode:$|;|1}}</td><td>{{#explode:$|;|2}}</td>
|</tr><tr>
}}
</tr>
</table>
 
 





Revision as of 16:45, 15 October 2012

motif without matrices Swissregulon:SRY.p1 Swissregulon:HOX(A,B,D)3.p1

doubled top motif tables CNhs10855 & CNhs11062 CNhs11245 & CNhs11183 CNhs11248 & CNhs11185 CNhs11772 & CNhs12996 CNhs11781 & CNhs12997


20121015164532 yes

20241223010121


Enrichment analysis: top 100 MCL coexpression mm9 enriched with this ontology term v019 var.

TOP 100 FANTOM5 Cage Peaks enriched with {{{id}}} ({{{name}}}), sorted by p-values <br>Analyst: Hideya Kawaji