FFCP PHASE1:Hg19::chr7:80551688..80551709,-: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:0000083;1.86e-07;4 | |ontology_enrichment_celltype_v019=CL:0000083;1.86e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.88e-08;29 | |ontology_enrichment_development_v019=UBERON:0008947;1.88e-08;29 | ||
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|ontology_enrichment_disease_v019_2=DOID:5093,6.68e-56,4;DOID:1612,6.68e-56,4;DOID:4074,1.37e-13,2;DOID:4905,1.37e-13,2;DOID:3498,1.37e-13,2;DOID:299,1.31e-09,25;DOID:1793,1.92e-07,4 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000310,6.42e-23,10;UBERON:0001443,6.54e-21,11;UBERON:0000915,2.51e-17,52;UBERON:0003127,7.30e-14,2;UBERON:0000341,1.55e-13,2;UBERON:0009569,4.32e-08,112;UBERON:0005178,2.71e-07,34;UBERON:0002224,2.71e-07,34;UBERON:0005181,4.21e-07,35 | |||
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| ||
|short_description=p28@SEMA3C | |short_description=p28@SEMA3C | ||
}} | }} |
Revision as of 23:17, 15 November 2012
Short description: | p28@SEMA3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_SEMA3C_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | -13bp_to_ENST00000419255, ENST00000544525, uc011kgw.1_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | Q99985F5H1Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 6.42e-23 | 10 |
chest | 6.54e-21 | 11 |
thoracic segment of trunk | 2.51e-17 | 52 |
open tracheal system trachea | 7.30e-14 | 2 |
throat | 1.55e-13 | 2 |
subdivision of trunk | 4.32e-08 | 112 |
thoracic cavity element | 2.71e-07 | 34 |
thoracic cavity | 2.71e-07 | 34 |
thoracic segment organ | 4.21e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.68e-56 | 4 |
breast cancer | 6.68e-56 | 4 |
pancreas adenocarcinoma | 1.37e-13 | 2 |
pancreatic carcinoma | 1.37e-13 | 2 |
pancreatic ductal adenocarcinoma | 1.37e-13 | 2 |
adenocarcinoma | 1.31e-09 | 25 |
pancreatic cancer | 1.92e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.