NonredundantMotifs:148

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known148
• db :UNIPROBE
• Id :Irf3_secondary
• name :SCI09
• score :0.3414365863614239
  
• External refs:

EntrezGene:3661
UniProt:3661

• Internal refs:

EntrezGene:3661

Motif matrix

P0 A C G T 1 0.236564586712149 0.149020313582308 0.414810647541439 0.199604452164104 2 0.197737296447104 0.139048359082098 0.436763623351043 0.226450721119755 3 0.598309181796851 0.0899627658052024 0.124244651423281 0.187483400974665 4 0.212136229570875 0.0552960410271202 0.648271588921951 0.0842961404800536 5 0.747143687927959 0.0271838395069201 0.0477889113605609 0.17788356120456 6 0.766824536209713 0.0512376003572714 0.039008367029908 0.142929496403107 7 0.479461928468923 0.0857425105575362 0.175517001238708 0.259278559734832 8 0.0646254891266184 0.107366356095086 0.753079212622898 0.0749289421553972 9 0.0580337208128221 0.074096196233567 0.820936527885196 0.0469335550684149 10 0.270071546945207 0.0887137920089251 0.217157700875943 0.424056960169925 11 0.0638672420416772 0.384542549671223 0.418513740997926 0.133076467289173 12 0.0473516117812653 0.597209681925573 0.16777018112198 0.187668525171182 13 0.266737119845261 0.15006346746941 0.382263891459544 0.200935521225784 14 0.381078535635948 0.204426622341778 0.218491540426112 0.196003301596161