NonredundantMotifs:204

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known204
• db :UNIPROBE
• Id :Arid5a_primary
• name :SCI09
• score :0.0566184251561548
  
• External refs:

EntrezGene:10865
UniProt:10865

• Internal refs:

EntrezGene:10865

Motif matrix

P0 A C G T 1 0.177322769961677 0.428313310855555 0.22903578216647 0.165328137016298 2 0.160221841004699 0.324571292259573 0.0324446387621822 0.482762227973546 3 0.852203018833067 0.0267326703147277 0.073955464568744 0.0471088462834612 4 0.961248539596473 0.00379831572782298 0.0101183390736629 0.0248348056020407 5 0.0565398220443113 0.00400812936891674 0.00787744708407332 0.931574601502699 6 0.930330589214641 0.0051379987521542 0.00713820083753976 0.057393211195665 7 0.019950864688249 0.0141888286179256 0.00678864795483705 0.959071658738988 8 0.0411316382396864 0.0875059354874809 0.0390246666857379 0.832337759587095 9 0.233918811349109 0.027935175632631 0.519604520580082 0.218541492438178 10 0.339577406902739 0.352987545623934 0.184315929397724 0.123119118075603 11 0.285389335391289 0.13471914100935 0.268289476918125 0.311602046681237 12 0.572142692856743 0.0784175907242025 0.190434321213762 0.159005395205293 13 0.285668980971376 0.184067740053308 0.262198874546343 0.268064404428973 14 0.342798848206545 0.230459946341397 0.153946120466092 0.272795084985967