Template:Known motif: Difference between revisions
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{{#info:<br>Analyst: Ivan Kulakovskiy <br> | {{#info:<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br> | ||
May 2013, Collection Name: non-redundant | |||
Collection Name: non-redundant | Analysis information: 208 clusters of known motifs were produced by MACRO-APE [http://autosome.ru/macroape/ click for the link] | ||
Analysis information: | |||
using the general phase1 motif clustering procedure applied for known motif collections. | using the general phase1 motif clustering procedure applied for known motif collections. | ||
<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were | <br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to other members not greater than mean+SD were considered as representatives. | ||
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Revision as of 16:45, 29 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: non-redundantAnalysis information: 208 clusters of known motifs were produced by MACRO-APE click for the link using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to other members not greater than mean+SD were considered as representatives.
- Name :{{{name}}}
- db :{{{representative_motif_db}}}
- Id :{{{representative_motif_id}}}
- name :{{{representative_motif_name}}}
- score :{{{score}}}
- Entry name : {{{uniprot_entry_name}}}
- Entrez GeneID :{{{entrez_gene_id}}}
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Sub Motif Members
