NonredundantMotifs:109: Difference between revisions
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|PWM=P0;A;C;G;T!1;2.499999999999997;5.5;1.499999999999996;1.499999999999996!2;0.0;2.0000000000000018;7.9999999999999964;0.9999999999999999!3;2.0000000000000018;0.9999999999999999;7.9999999999999964;0.0!4;0.0;6.9999999999999964;3.0000000000000027;0.9999999999999999!5;2.0000000000000018;0.0;3.0000000000000027;5.999999999999995!6;0.9999999999999999;0.0;7.9999999999999964;2.0000000000000018!7;4.0000000000000036;0.0;0.0;6.9999999999999964!8;5.000000000000004;0.0;0.0;5.999999999999995!9;6.9999999999999964;3.0000000000000027;0.9999999999999999;0.0!10;0.9999999999999999;8.999999999999998;0.9999999999999999;0.0!11;3.0000000000000027;5.999999999999995;2.0000000000000018;0.0!12;0.0;5.000000000000004;3.0000000000000027;3.0000000000000027!13;2.0000000000000018;3.0000000000000027;0.9999999999999999;5.000000000000004!14;0.0;2.0000000000000018;6.9999999999999964;2.0000000000000018!15;0.0;0.9999999999999999;9.999999999999998;0.0!16;1.7499999999999991;1.7499999999999991;5.7500000000000036;1.7499999999999991 | |PWM=P0;A;C;G;T!1;2.499999999999997;5.5;1.499999999999996;1.499999999999996!2;0.0;2.0000000000000018;7.9999999999999964;0.9999999999999999!3;2.0000000000000018;0.9999999999999999;7.9999999999999964;0.0!4;0.0;6.9999999999999964;3.0000000000000027;0.9999999999999999!5;2.0000000000000018;0.0;3.0000000000000027;5.999999999999995!6;0.9999999999999999;0.0;7.9999999999999964;2.0000000000000018!7;4.0000000000000036;0.0;0.0;6.9999999999999964!8;5.000000000000004;0.0;0.0;5.999999999999995!9;6.9999999999999964;3.0000000000000027;0.9999999999999999;0.0!10;0.9999999999999999;8.999999999999998;0.9999999999999999;0.0!11;3.0000000000000027;5.999999999999995;2.0000000000000018;0.0!12;0.0;5.000000000000004;3.0000000000000027;3.0000000000000027!13;2.0000000000000018;3.0000000000000027;0.9999999999999999;5.000000000000004!14;0.0;2.0000000000000018;6.9999999999999964;2.0000000000000018!15;0.0;0.9999999999999999;9.999999999999998;0.0!16;1.7499999999999991;1.7499999999999991;5.7500000000000036;1.7499999999999991 | ||
|entrez_gene_id=84654 | |entrez_gene_id=84654 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:ZN589_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:SPZ1_f1~ZN589_f1 | ||
|name= | |name=non-redundant109 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=SPZ1_f1 | |representative_motif_id=SPZ1_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Revision as of 16:47, 29 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant109
- db :HOCOMOCO
- Id :SPZ1_f1
- name :
- score :0.8153778359751451
- External refs:
- Internal refs:
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Sub Motif Members
