NonredundantMotifs:137

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant137
• db :HOCOMOCO
• Id :IRF5_f1
• name  :
• score :0.11620521507921608
  
• External refs:

EntrezGene:3663
UniProt:3663

• Internal refs:

EntrezGene:3663

Motif matrix

P0 A C G T 1 0.8888888888888901 0.0 1.88888888888889 2.2222222222222197 2 3.88888888888889 0.0 1.1111111111111098 0.0 3 5.0 0.0 0.0 0.0 4 5.0 0.0 0.0 0.0 5 0.0 0.0 4.111111111111115 0.8888888888888901 6 0.8888888888888901 0.0 4.111111111111115 0.0 7 3.11111111111111 0.0 1.88888888888889 0.0 8 5.0 0.0 0.0 0.0 9 5.0 0.0 0.0 0.0 10 1.88888888888889 0.0 3.11111111111111 0.0 11 0.0 5.0 0.0 0.0 12 1.1111111111111098 2.11111111111111 0.8888888888888901 0.8888888888888901 13 4.0 0.0 1.0 0.0 14 5.0 0.0 0.0 0.0 15 5.0 0.0 0.0 0.0 16 3.22222222222222 0.0 0.0 1.7777777777777801 17 0.0 2.11111111111111 2.8888888888888897 0.0 18 2.2222222222222197 0.0 0.0 2.7777777777777803 19 0.0 0.0 4.111111111111115 0.8888888888888901 20 3.444444444444445 1.1111111111111098 0.222222222222222 0.222222222222222